RNA–Protein interactions for RNA: ENST00000461326.1

CLK1-206, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 435 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-206ENST00000461326 LINC00959A0A1B0GUT2 108 aa1.19□□□□□ -2.22
CLK1-206ENST00000461326 TAX1BP3O14907 124 aa1.19□□□□□ -2.22
CLK1-206ENST00000461326 CCL25O15444 150 aa1.19□□□□□ -2.22
CLK1-206ENST00000461326 SMR3BP02814 79 aaPredicted RBP1.19□□□□□ -2.22
CLK1-206ENST00000461326 ZNF25P17030 456 aaPredicted RBP1.19□□□□□ -2.22
CLK1-206ENST00000461326 IFI27P40305 119 aaPredicted RBP1.19□□□□□ -2.22
CLK1-206ENST00000461326 Q6ZUT4 128 aa1.19□□□□□ -2.22
CLK1-206ENST00000461326 SVBPQ8N300 66 aa1.19□□□□□ -2.22
CLK1-206ENST00000461326 LINC00526Q96FQ7 95 aa1.19□□□□□ -2.22
CLK1-206ENST00000461326 C20orf78Q9BR46 151 aa1.19□□□□□ -2.22
CLK1-206ENST00000461326 SMIM2Q9BVW6 85 aa1.19□□□□□ -2.22
CLK1-206ENST00000461326 SRRM2Q9UQ35 2752 aaKnown RBP1.19□□□□□ -2.22
CLK1-206ENST00000461326 UBE2D4Q9Y2X8 147 aa1.19□□□□□ -2.22
CLK1-206ENST00000461326 DYNC1H1Q14204 4646 aaKnown RBP1.19□□□□□ -2.22
CLK1-206ENST00000461326 PKHD1L1Q86WI1 4243 aa1.18□□□□□ -2.22
CLK1-206ENST00000461326 BIRC6Q9NR09 4857 aa1.18□□□□□ -2.22
CLK1-206ENST00000461326 HSPG2P98160 4391 aa1.18□□□□□ -2.22
CLK1-206ENST00000461326 UBE2BP63146 152 aa1.18□□□□□ -2.22
CLK1-206ENST00000461326 C1orf137Q5JT78 98 aa1.18□□□□□ -2.22
CLK1-206ENST00000461326 KRTAP26-1Q6PEX3 210 aa1.18□□□□□ -2.22
CLK1-206ENST00000461326 C5orf38Q86SI9 138 aa1.18□□□□□ -2.22
CLK1-206ENST00000461326 Q8N8P6 123 aa1.18□□□□□ -2.22
CLK1-206ENST00000461326 DPH3Q96FX2 82 aa1.18□□□□□ -2.22
CLK1-206ENST00000461326 TMEM141Q96I45 108 aa1.18□□□□□ -2.22
CLK1-206ENST00000461326 C2orf88Q9BSF0 95 aa1.18□□□□□ -2.22
CLK1-206ENST00000461326 NXT2Q9NPJ8 142 aaKnown RBP1.18□□□□□ -2.22
CLK1-206ENST00000461326 SMCO4Q9NRQ5 59 aa1.18□□□□□ -2.22
CLK1-206ENST00000461326 CDC42SE2Q9NRR3 84 aa1.18□□□□□ -2.22
CLK1-206ENST00000461326 SPANXA1Q9NS26 97 aa1.18□□□□□ -2.22
CLK1-206ENST00000461326 LAMTOR2Q9Y2Q5 125 aa1.18□□□□□ -2.22
CLK1-206ENST00000461326 LRP1BQ9NZR2 4599 aa1.17□□□□□ -2.22
CLK1-206ENST00000461326 APOBP04114 4563 aaKnown RBP1.17□□□□□ -2.22
CLK1-206ENST00000461326 TRAV16A0A0A6YYK6 109 aaPredicted RBP1.17□□□□□ -2.22
CLK1-206ENST00000461326 IGHV1-58A0A0C4DH39 117 aa1.17□□□□□ -2.22
CLK1-206ENST00000461326 M0R378 163 aa1.17□□□□□ -2.22
CLK1-206ENST00000461326 MT-ND6P03923 174 aa1.17□□□□□ -2.22
CLK1-206ENST00000461326 TRGC2P03986 189 aa1.17□□□□□ -2.22
CLK1-206ENST00000461326 G0S2P27469 103 aa1.17□□□□□ -2.22
CLK1-206ENST00000461326 NDUFA6P56556 154 aa1.17□□□□□ -2.22
CLK1-206ENST00000461326 CNBPP62633 177 aaKnown RBP1.17□□□□□ -2.22
CLK1-206ENST00000461326 MRPS36P82909 103 aaKnown RBP1.17□□□□□ -2.22
CLK1-206ENST00000461326 COX6A2Q02221 97 aa1.17□□□□□ -2.22
CLK1-206ENST00000461326 SPAG11BQ08648 103 aa1.17□□□□□ -2.22
CLK1-206ENST00000461326 PMCHL1Q16048 86 aa1.17□□□□□ -2.22
CLK1-206ENST00000461326 Q5VSD8 79 aa1.17□□□□□ -2.22
CLK1-206ENST00000461326 OR13C6PQ8NH95 151 aa1.17□□□□□ -2.22
CLK1-206ENST00000461326 TMEM254Q8TBM7 123 aa1.17□□□□□ -2.22
CLK1-206ENST00000461326 C18orf32Q8TCD1 76 aa1.17□□□□□ -2.22
CLK1-206ENST00000461326 CARD19Q96LW7 228 aa1.17□□□□□ -2.22
CLK1-206ENST00000461326 TOMM7Q9P0U1 55 aa1.17□□□□□ -2.22
CLK1-206ENST00000461326 DNAH8Q96JB1 4490 aa1.17□□□□□ -2.22
CLK1-206ENST00000461326 A0A096LNI7 61 aa1.16□□□□□ -2.22
CLK1-206ENST00000461326 GVQW2A0A096LPI5 108 aaPredicted RBP1.16□□□□□ -2.22
CLK1-206ENST00000461326 LOC107984640A0A0U1RRK4 108 aa1.16□□□□□ -2.22
CLK1-206ENST00000461326 LINC01546A6NGU7 62 aa1.16□□□□□ -2.22
CLK1-206ENST00000461326 IGIPA6NJ69 53 aa1.16□□□□□ -2.22
CLK1-206ENST00000461326 K7EMI3 77 aa1.16□□□□□ -2.22
CLK1-206ENST00000461326 NDUFA1O15239 70 aa1.16□□□□□ -2.22
CLK1-206ENST00000461326 TIMM17BO60830 172 aa1.16□□□□□ -2.22
CLK1-206ENST00000461326 HBDP02042 147 aa1.16□□□□□ -2.22
CLK1-206ENST00000461326 SPINK8P0C7L1 97 aa1.16□□□□□ -2.22
CLK1-206ENST00000461326 UBE2D1P51668 147 aa1.16□□□□□ -2.22
CLK1-206ENST00000461326 RPL37AP61513 92 aaKnown RBP1.16□□□□□ -2.22
CLK1-206ENST00000461326 C9orf116Q5BN46 136 aaPredicted RBP1.16□□□□□ -2.22
CLK1-206ENST00000461326 BAGE3Q86Y29 109 aa1.16□□□□□ -2.22
CLK1-206ENST00000461326 FAM19A2Q8N3H0 131 aa1.16□□□□□ -2.22
CLK1-206ENST00000461326 AMELXQ99217 191 aa1.16□□□□□ -2.22
CLK1-206ENST00000461326 HERC2O95714 4834 aa1.16□□□□□ -2.22
CLK1-206ENST00000461326 LINC01549A6NIU2 74 aa1.15□□□□□ -2.23
CLK1-206ENST00000461326 INE1O15225 51 aa1.15□□□□□ -2.23
CLK1-206ENST00000461326 FABP4P15090 132 aa1.15□□□□□ -2.23
CLK1-206ENST00000461326 CKS1BP61024 79 aa1.15□□□□□ -2.23
CLK1-206ENST00000461326 SEC11AP67812 179 aa1.15□□□□□ -2.23
CLK1-206ENST00000461326 TMEM170BQ5T4T1 132 aa1.15□□□□□ -2.23
CLK1-206ENST00000461326 C2orf82Q6UX34 121 aa1.15□□□□□ -2.23
CLK1-206ENST00000461326 COX7B2Q8TF08 81 aa1.15□□□□□ -2.23
CLK1-206ENST00000461326 IFI27L1Q96BM0 104 aa1.15□□□□□ -2.23
CLK1-206ENST00000461326 CHCHD1Q96BP2 118 aaKnown RBP1.15□□□□□ -2.23
CLK1-206ENST00000461326 C6orf48Q9UBA6 75 aa1.15□□□□□ -2.23
CLK1-206ENST00000461326 CDKN2A-AS1Q9UH64 79 aa1.15□□□□□ -2.23
CLK1-206ENST00000461326 RYR1P21817 5038 aa1.15□□□□□ -2.23
CLK1-206ENST00000461326 TRBV30A0A0K0K1B3 111 aa1.14□□□□□ -2.23
CLK1-206ENST00000461326 F8VRH5 84 aa1.14□□□□□ -2.23
CLK1-206ENST00000461326 H3BRM9 83 aa1.14□□□□□ -2.23
CLK1-206ENST00000461326 NUPR1O60356 82 aa1.14□□□□□ -2.23
CLK1-206ENST00000461326 LEPROTL1O95214 131 aa1.14□□□□□ -2.23
CLK1-206ENST00000461326 IGLC3P0DOY3 106 aa1.14□□□□□ -2.23
CLK1-206ENST00000461326 CIRBPQ14011 172 aaKnown RBP1.14□□□□□ -2.23
CLK1-206ENST00000461326 SOSTDC1Q6X4U4 206 aa1.14□□□□□ -2.23
CLK1-206ENST00000461326 PHF5AQ7RTV0 110 aaKnown RBP1.14□□□□□ -2.23
CLK1-206ENST00000461326 Q8IZM0 81 aa1.14□□□□□ -2.23
CLK1-206ENST00000461326 MRPL35Q9NZE8 188 aaKnown RBP1.14□□□□□ -2.23
CLK1-206ENST00000461326 PLAC8Q9NZF1 115 aa1.14□□□□□ -2.23
CLK1-206ENST00000461326 LINC00474Q9P2X8 69 aa1.14□□□□□ -2.23
CLK1-206ENST00000461326 HSPB8Q9UJY1 196 aa1.14□□□□□ -2.23
CLK1-206ENST00000461326 MYCBP2O75592 4640 aa1.14□□□□□ -2.23
CLK1-206ENST00000461326 KIAA1109Q2LD37 5005 aa1.14□□□□□ -2.23
CLK1-206ENST00000461326 HIST1H2BKO60814 126 aa1.13□□□□□ -2.23
CLK1-206ENST00000461326 IGKCP01834 107 aa1.13□□□□□ -2.23
CLK1-206ENST00000461326 HIST1H2BJP06899 126 aa1.13□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 97.4 ms