RNA–Protein interactions for RNA: ENST00000461113.5

HDAC4-207, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 1,019 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-207ENST00000461113 CTAG1AP78358 180 aa7.36□□□□□ -1.23
HDAC4-207ENST00000461113 C9orf153Q5TBE3 101 aa7.36□□□□□ -1.23
HDAC4-207ENST00000461113 KRTAP13-2Q52LG2 175 aa7.35□□□□□ -1.23
HDAC4-207ENST00000461113 SSBP3-AS1Q7Z2R9 100 aa7.35□□□□□ -1.23
HDAC4-207ENST00000461113 LINC00304Q8N9R0 145 aa7.35□□□□□ -1.23
HDAC4-207ENST00000461113 GHRHP01286 108 aa7.34□□□□□ -1.23
HDAC4-207ENST00000461113 PRR4Q16378 134 aa7.34□□□□□ -1.23
HDAC4-207ENST00000461113 SPAG11AQ6PDA7 123 aa7.34□□□□□ -1.23
HDAC4-207ENST00000461113 C3orf22Q8N5N4 141 aa7.34□□□□□ -1.23
HDAC4-207ENST00000461113 SPRR1BP22528 89 aa7.33□□□□□ -1.24
HDAC4-207ENST00000461113 MOBPQ13875 183 aa7.33□□□□□ -1.24
HDAC4-207ENST00000461113 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.33□□□□□ -1.24
HDAC4-207ENST00000461113 F8WEM9 126 aa7.32□□□□□ -1.24
HDAC4-207ENST00000461113 K7ERJ3 54 aa7.32□□□□□ -1.24
HDAC4-207ENST00000461113 A0A1B0GX51 115 aa7.31□□□□□ -1.24
HDAC4-207ENST00000461113 TSPAN13O95857 204 aa7.31□□□□□ -1.24
HDAC4-207ENST00000461113 SCGB1C2P0DMR2 95 aa7.31□□□□□ -1.24
HDAC4-207ENST00000461113 OCIAD2Q56VL3 154 aa7.31□□□□□ -1.24
HDAC4-207ENST00000461113 Q6ZQY7 126 aa7.31□□□□□ -1.24
HDAC4-207ENST00000461113 Q8NBF4 154 aa7.31□□□□□ -1.24
HDAC4-207ENST00000461113 IGLV5-48A0A075B6I7 105 aa7.3□□□□□ -1.24
HDAC4-207ENST00000461113 TRIAP1O43715 76 aa7.29□□□□□ -1.24
HDAC4-207ENST00000461113 DNAL4O96015 105 aa7.29□□□□□ -1.24
HDAC4-207ENST00000461113 PPDPFLQ8WWR9 84 aa7.29□□□□□ -1.24
HDAC4-207ENST00000461113 SNHG12Q9BXW3 62 aa7.29□□□□□ -1.24
HDAC4-207ENST00000461113 BATFQ16520 125 aa7.28□□□□□ -1.24
HDAC4-207ENST00000461113 SPINK1P00995 79 aa7.27□□□□□ -1.25
HDAC4-207ENST00000461113 Q8N377 158 aa7.27□□□□□ -1.25
HDAC4-207ENST00000461113 H3BQ85 93 aa7.26□□□□□ -1.25
HDAC4-207ENST00000461113 LINC01547P58512 204 aaPredicted RBP7.25□□□□□ -1.25
HDAC4-207ENST00000461113 LYRM7Q5U5X0 104 aa7.24□□□□□ -1.25
HDAC4-207ENST00000461113 SMIM29Q86T20 159 aa7.23□□□□□ -1.25
HDAC4-207ENST00000461113 CLEC2BQ92478 149 aa7.23□□□□□ -1.25
HDAC4-207ENST00000461113 FAM218AQ96MZ4 157 aa7.23□□□□□ -1.25
HDAC4-207ENST00000461113 FABP2P12104 132 aa7.22□□□□□ -1.25
HDAC4-207ENST00000461113 Q6JHZ5 121 aa7.22□□□□□ -1.25
HDAC4-207ENST00000461113 ORMDL1Q9P0S3 153 aa7.22□□□□□ -1.25
HDAC4-207ENST00000461113 RPS29P62273 56 aaKnown RBP7.21□□□□□ -1.26
HDAC4-207ENST00000461113 CD164Q04900 197 aa7.2□□□□□ -1.26
HDAC4-207ENST00000461113 LIMD2Q9BT23 127 aa7.2□□□□□ -1.26
HDAC4-207ENST00000461113 TMEM256-PLSCR3K7ERE1 68 aa7.19□□□□□ -1.26
HDAC4-207ENST00000461113 TRACP01848 142 aa7.19□□□□□ -1.26
HDAC4-207ENST00000461113 HRCT1Q6UXD1 115 aa7.19□□□□□ -1.26
HDAC4-207ENST00000461113 LOC100996750A0A140TA64 210 aa7.18□□□□□ -1.26
HDAC4-207ENST00000461113 NDUFV3P56181 108 aaKnown RBP7.18□□□□□ -1.26
HDAC4-207ENST00000461113 ATXN8Q156A1 80 aa7.18□□□□□ -1.26
HDAC4-207ENST00000461113 KRTAP4-6Q9BYQ5 205 aa7.18□□□□□ -1.26
HDAC4-207ENST00000461113 LST1O00453 97 aa7.17□□□□□ -1.26
HDAC4-207ENST00000461113 IGLV8-61A0A075B6I0 122 aa7.16□□□□□ -1.26
HDAC4-207ENST00000461113 NAA38Q9BRA0 125 aaKnown RBP7.16□□□□□ -1.26
HDAC4-207ENST00000461113 TRBV20-1A0A075B6N2 111 aa7.15□□□□□ -1.26
HDAC4-207ENST00000461113 H3BMG7 143 aa7.15□□□□□ -1.26
HDAC4-207ENST00000461113 H3BUT2 72 aa7.15□□□□□ -1.26
HDAC4-207ENST00000461113 C9orf118A6NHY6 69 aa7.14□□□□□ -1.27
HDAC4-207ENST00000461113 TCL1BO95988 128 aa7.14□□□□□ -1.27
HDAC4-207ENST00000461113 FP248Q71RG6 208 aaPredicted RBP7.14□□□□□ -1.27
HDAC4-207ENST00000461113 RETNLBQ9BQ08 111 aa7.14□□□□□ -1.27
HDAC4-207ENST00000461113 IGLV7-46A0A075B6I9 117 aa7.13□□□□□ -1.27
HDAC4-207ENST00000461113 UBE2V1Q13404 147 aa7.13□□□□□ -1.27
HDAC4-207ENST00000461113 MUC17Q685J3 4493 aa7.13□□□□□ -1.27
HDAC4-207ENST00000461113 PCP4L1A6NKN8 68 aa7.12□□□□□ -1.27
HDAC4-207ENST00000461113 BAALC-AS2P0C853 105 aa7.12□□□□□ -1.27
HDAC4-207ENST00000461113 COL5A1-AS1Q5SY13 56 aa7.12□□□□□ -1.27
HDAC4-207ENST00000461113 IGFL1Q6UW32 110 aa7.12□□□□□ -1.27
HDAC4-207ENST00000461113 A0A0G2JQZ4 141 aa7.1□□□□□ -1.27
HDAC4-207ENST00000461113 ANKRD29Q8N6D5 301 aa7.1□□□□□ -1.27
HDAC4-207ENST00000461113 A0A1W2PPM0 123 aa7.09□□□□□ -1.27
HDAC4-207ENST00000461113 TAX1BP3O14907 124 aa7.09□□□□□ -1.27
HDAC4-207ENST00000461113 TRBV7-7A0A0K0K1E9 115 aa7.08□□□□□ -1.28
HDAC4-207ENST00000461113 Q5XG85 94 aa7.08□□□□□ -1.28
HDAC4-207ENST00000461113 TEN1Q86WV5 123 aa7.08□□□□□ -1.28
HDAC4-207ENST00000461113 A0A1B0GV72 72 aa7.07□□□□□ -1.28
HDAC4-207ENST00000461113 RBM3P98179 157 aaKnown RBP7.07□□□□□ -1.28
HDAC4-207ENST00000461113 DSCR8Q96T75 97 aa7.07□□□□□ -1.28
HDAC4-207ENST00000461113 SS18L2Q9UHA2 77 aa7.07□□□□□ -1.28
HDAC4-207ENST00000461113 C9JAW5 83 aa7.05□□□□□ -1.28
HDAC4-207ENST00000461113 JMJD7-PLA2G4BH0Y9G9 81 aa7.05□□□□□ -1.28
HDAC4-207ENST00000461113 Q6Q795 121 aa7.05□□□□□ -1.28
HDAC4-207ENST00000461113 CDIP1Q9H305 208 aa7.05□□□□□ -1.28
HDAC4-207ENST00000461113 TPRXLQ17RH7 258 aa7.04□□□□□ -1.28
HDAC4-207ENST00000461113 SPCS1Q9Y6A9 102 aa7.04□□□□□ -1.28
HDAC4-207ENST00000461113 TRBV7-4A0A0J9YYF1 115 aa7.01□□□□□ -1.29
HDAC4-207ENST00000461113 KRTAP9-7A8MTY7 169 aa7.01□□□□□ -1.29
HDAC4-207ENST00000461113 CCKP06307 115 aa7.01□□□□□ -1.29
HDAC4-207ENST00000461113 C21orf62-AS1Q17RA5 79 aa7.01□□□□□ -1.29
HDAC4-207ENST00000461113 ASB16-AS1Q495Z4 193 aa7.01□□□□□ -1.29
HDAC4-207ENST00000461113 VPS25Q9BRG1 176 aa7.01□□□□□ -1.29
HDAC4-207ENST00000461113 A0A087WSZ3 146 aa7□□□□□ -1.29
HDAC4-207ENST00000461113 H3BT86 120 aa7□□□□□ -1.29
HDAC4-207ENST00000461113 PDE6GP18545 87 aa7□□□□□ -1.29
HDAC4-207ENST00000461113 C1orf195Q5TG92 126 aa7□□□□□ -1.29
HDAC4-207ENST00000461113 A0A1W2PNM2 257 aa6.98□□□□□ -1.29
HDAC4-207ENST00000461113 GTF2H5Q6ZYL4 71 aa6.97□□□□□ -1.29
HDAC4-207ENST00000461113 KRTAP13-3Q3SY46 172 aa6.96□□□□□ -1.3
HDAC4-207ENST00000461113 LOC110117498A0A087WWA1 95 aa6.94□□□□□ -1.3
HDAC4-207ENST00000461113 K7EP34 96 aa6.94□□□□□ -1.3
HDAC4-207ENST00000461113 MTURNQ8N3F0 131 aa6.94□□□□□ -1.3
HDAC4-207ENST00000461113 A0A1B0GW54 56 aa6.93□□□□□ -1.3
HDAC4-207ENST00000461113 C14orf132Q9NPU4 83 aa6.93□□□□□ -1.3
HDAC4-207ENST00000461113 C9orf92A6NGG3 77 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms