RNA–Protein interactions for RNA: ENST00000460633.1

HLA-DQA1-205, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

Gene HLA-DQA1, Length 5,450 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-205ENST00000460633 BAHCC1Q9P281 2608 aa3.94□□□□□ -1.78
HLA-DQA1-205ENST00000460633 MKI67P46013 3256 aaKnown RBP3.93□□□□□ -1.78
HLA-DQA1-205ENST00000460633 USP9XQ93008 2570 aaPredicted RBP3.93□□□□□ -1.78
HLA-DQA1-205ENST00000460633 SPANXA2-OT1Q8N9U9 137 aa3.93□□□□□ -1.78
HLA-DQA1-205ENST00000460633 MIR22HGQ0VDD5 57 aa3.92□□□□□ -1.78
HLA-DQA1-205ENST00000460633 A8MU10 97 aa3.91□□□□□ -1.78
HLA-DQA1-205ENST00000460633 FASNP49327 2511 aaKnown RBP3.91□□□□□ -1.78
HLA-DQA1-205ENST00000460633 UNC80Q8N2C7 3258 aa3.91□□□□□ -1.78
HLA-DQA1-205ENST00000460633 SETD2Q9BYW2 2564 aaPredicted RBP3.91□□□□□ -1.78
HLA-DQA1-205ENST00000460633 IGLV5-48A0A075B6I7 105 aa3.91□□□□□ -1.78
HLA-DQA1-205ENST00000460633 Q8NDZ9 215 aa3.91□□□□□ -1.78
HLA-DQA1-205ENST00000460633 CFAP54Q96N23 3096 aa3.91□□□□□ -1.78
HLA-DQA1-205ENST00000460633 CDH23Q9H251 3354 aa3.91□□□□□ -1.78
HLA-DQA1-205ENST00000460633 NBPF19A0A087WUL8 3843 aa3.9□□□□□ -1.78
HLA-DQA1-205ENST00000460633 RPS29P62273 56 aaKnown RBP3.9□□□□□ -1.78
HLA-DQA1-205ENST00000460633 A6NN06 94 aa3.9□□□□□ -1.78
HLA-DQA1-205ENST00000460633 JMJD1CQ15652 2540 aa3.9□□□□□ -1.79
HLA-DQA1-205ENST00000460633 ZFYVE26Q68DK2 2539 aa3.89□□□□□ -1.79
HLA-DQA1-205ENST00000460633 TLN2Q9Y4G6 2542 aa3.89□□□□□ -1.79
HLA-DQA1-205ENST00000460633 LAMA2P24043 3122 aaKnown RBP3.89□□□□□ -1.79
HLA-DQA1-205ENST00000460633 ABCA12Q86UK0 2595 aa3.89□□□□□ -1.79
HLA-DQA1-205ENST00000460633 AKAP13Q12802 2813 aa3.88□□□□□ -1.79
HLA-DQA1-205ENST00000460633 ZCCHC13Q8WW36 166 aaKnown RBP3.88□□□□□ -1.79
HLA-DQA1-205ENST00000460633 CSMD2Q7Z408 3487 aa3.88□□□□□ -1.79
HLA-DQA1-205ENST00000460633 A0A0D9SG42 100 aa3.88□□□□□ -1.79
HLA-DQA1-205ENST00000460633 Q8N9P0 234 aaPredicted RBP3.88□□□□□ -1.79
HLA-DQA1-205ENST00000460633 SMG1Q96Q15 3661 aaKnown RBP3.87□□□□□ -1.79
HLA-DQA1-205ENST00000460633 UNC79Q9P2D8 2635 aa3.86□□□□□ -1.79
HLA-DQA1-205ENST00000460633 R4GN34 69 aa3.86□□□□□ -1.79
HLA-DQA1-205ENST00000460633 RANBP2P49792 3224 aaKnown RBP3.85□□□□□ -1.79
HLA-DQA1-205ENST00000460633 RELNP78509 3460 aa3.85□□□□□ -1.79
HLA-DQA1-205ENST00000460633 POLQO75417 2590 aa3.83□□□□□ -1.8
HLA-DQA1-205ENST00000460633 DMAC1Q96GE9 116 aa3.83□□□□□ -1.8
HLA-DQA1-205ENST00000460633 Q6ZR54 194 aa3.83□□□□□ -1.8
HLA-DQA1-205ENST00000460633 ANAPC11Q9NYG5 84 aa3.83□□□□□ -1.8
HLA-DQA1-205ENST00000460633 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.82□□□□□ -1.8
HLA-DQA1-205ENST00000460633 LAMA3Q16787 3333 aa3.82□□□□□ -1.8
HLA-DQA1-205ENST00000460633 KRTAP10-1P60331 282 aa3.82□□□□□ -1.8
HLA-DQA1-205ENST00000460633 LINC01558Q9Y6Z2 57 aa3.82□□□□□ -1.8
HLA-DQA1-205ENST00000460633 HECTD1Q9ULT8 2610 aa3.81□□□□□ -1.8
HLA-DQA1-205ENST00000460633 ADM2Q7Z4H4 148 aa3.81□□□□□ -1.8
HLA-DQA1-205ENST00000460633 TRIOO75962 3097 aa3.81□□□□□ -1.8
HLA-DQA1-205ENST00000460633 CHD6Q8TD26 2715 aa3.8□□□□□ -1.8
HLA-DQA1-205ENST00000460633 ACANP16112 2415 aa3.8□□□□□ -1.8
HLA-DQA1-205ENST00000460633 SPINK7P58062 85 aa3.8□□□□□ -1.8
HLA-DQA1-205ENST00000460633 MTORP42345 2549 aa3.78□□□□□ -1.8
HLA-DQA1-205ENST00000460633 MMP24-AS1A0A0U1RRL7 71 aa3.78□□□□□ -1.8
HLA-DQA1-205ENST00000460633 SPRR1BP22528 89 aa3.77□□□□□ -1.81
HLA-DQA1-205ENST00000460633 FLNAP21333 2647 aaKnown RBP3.77□□□□□ -1.81
HLA-DQA1-205ENST00000460633 ITPR3Q14573 2671 aa3.77□□□□□ -1.81
HLA-DQA1-205ENST00000460633 CELSR3Q9NYQ7 3312 aa3.75□□□□□ -1.81
HLA-DQA1-205ENST00000460633 SPRR1AP35321 89 aa3.75□□□□□ -1.81
HLA-DQA1-205ENST00000460633 CFAP46Q8IYW2 2715 aa3.75□□□□□ -1.81
HLA-DQA1-205ENST00000460633 XIRP2A4UGR9 3374 aa3.75□□□□□ -1.81
HLA-DQA1-205ENST00000460633 SZT2Q5T011 3432 aa3.75□□□□□ -1.81
HLA-DQA1-205ENST00000460633 VCANP13611 3396 aa3.74□□□□□ -1.81
HLA-DQA1-205ENST00000460633 ASB16-AS1Q495Z4 193 aa3.74□□□□□ -1.81
HLA-DQA1-205ENST00000460633 A0A1B0GU33 70 aa3.74□□□□□ -1.81
HLA-DQA1-205ENST00000460633 LINC00472Q9H8W2 130 aa3.73□□□□□ -1.81
HLA-DQA1-205ENST00000460633 FREM2Q5SZK8 3169 aa3.73□□□□□ -1.81
HLA-DQA1-205ENST00000460633 VPS13AQ96RL7 3174 aa3.73□□□□□ -1.81
HLA-DQA1-205ENST00000460633 ROMO1P60602 79 aa3.73□□□□□ -1.81
HLA-DQA1-205ENST00000460633 SPENQ96T58 3664 aaKnown RBP3.72□□□□□ -1.81
HLA-DQA1-205ENST00000460633 KRTAP10-2P60368 255 aa3.72□□□□□ -1.81
HLA-DQA1-205ENST00000460633 H1FX-AS1Q4G0G2 97 aa3.72□□□□□ -1.81
HLA-DQA1-205ENST00000460633 PRO2289Q9P1D8 64 aa3.72□□□□□ -1.81
HLA-DQA1-205ENST00000460633 NBEAQ8NFP9 2946 aa3.71□□□□□ -1.81
HLA-DQA1-205ENST00000460633 FLNBO75369 2602 aaKnown RBP3.71□□□□□ -1.82
HLA-DQA1-205ENST00000460633 M0QZ58 72 aa3.71□□□□□ -1.82
HLA-DQA1-205ENST00000460633 GCN1Q92616 2671 aaKnown RBP3.71□□□□□ -1.82
HLA-DQA1-205ENST00000460633 PANO1I0J062 215 aa3.7□□□□□ -1.82
HLA-DQA1-205ENST00000460633 KRTAP26-1Q6PEX3 210 aa3.7□□□□□ -1.82
HLA-DQA1-205ENST00000460633 BSNQ9UPA5 3926 aa3.7□□□□□ -1.82
HLA-DQA1-205ENST00000460633 LAMA1P25391 3075 aa3.7□□□□□ -1.82
HLA-DQA1-205ENST00000460633 ITPR1Q14643 2758 aa3.69□□□□□ -1.82
HLA-DQA1-205ENST00000460633 FRYQ5TBA9 3013 aa3.69□□□□□ -1.82
HLA-DQA1-205ENST00000460633 CSMD1Q96PZ7 3565 aa3.69□□□□□ -1.82
HLA-DQA1-205ENST00000460633 PRUNE2Q8WUY3 3088 aa3.69□□□□□ -1.82
HLA-DQA1-205ENST00000460633 NDUFAF8A1L188 74 aa3.68□□□□□ -1.82
HLA-DQA1-205ENST00000460633 KRTAP29-1A8MX34 341 aaPredicted RBP3.68□□□□□ -1.82
HLA-DQA1-205ENST00000460633 MGAQ8IWI9 3026 aa3.68□□□□□ -1.82
HLA-DQA1-205ENST00000460633 C20orf166-AS1Q96NR2 134 aa3.68□□□□□ -1.82
HLA-DQA1-205ENST00000460633 MUC3AQ02505 3323 aa3.68□□□□□ -1.82
HLA-DQA1-205ENST00000460633 WDFY4Q6ZS81 3184 aa3.68□□□□□ -1.82
HLA-DQA1-205ENST00000460633 DSPP15924 2871 aaKnown RBP3.68□□□□□ -1.82
HLA-DQA1-205ENST00000460633 REV3LO60673 3130 aa3.67□□□□□ -1.82
HLA-DQA1-205ENST00000460633 Q6ZRN7 208 aaPredicted RBP3.67□□□□□ -1.82
HLA-DQA1-205ENST00000460633 ASH1LQ9NR48 2969 aaKnown RBP3.67□□□□□ -1.82
HLA-DQA1-205ENST00000460633 KRTAP4-16G5E9R7 235 aaPredicted RBP3.67□□□□□ -1.82
HLA-DQA1-205ENST00000460633 RPL37P61927 97 aaKnown RBP3.67□□□□□ -1.82
HLA-DQA1-205ENST00000460633 Q5W150 140 aa3.67□□□□□ -1.82
HLA-DQA1-205ENST00000460633 NOTCH2NLQ7Z3S9 236 aa3.66□□□□□ -1.82
HLA-DQA1-205ENST00000460633 ASPMQ8IZT6 3477 aa3.65□□□□□ -1.83
HLA-DQA1-205ENST00000460633 COL6A3P12111 3177 aa3.65□□□□□ -1.83
HLA-DQA1-205ENST00000460633 EYSQ5T1H1 3165 aa3.64□□□□□ -1.83
HLA-DQA1-205ENST00000460633 LAMA5O15230 3695 aa3.64□□□□□ -1.83
HLA-DQA1-205ENST00000460633 SPEGQ15772 3267 aa3.64□□□□□ -1.83
HLA-DQA1-205ENST00000460633 APCP25054 2843 aa3.64□□□□□ -1.83
HLA-DQA1-205ENST00000460633 PDZD2O15018 2839 aa3.63□□□□□ -1.83
HLA-DQA1-205ENST00000460633 KALRNO60229 2985 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms