RNA–Protein interactions for RNA: ENST00000459783.5

MRPL55-223, Transcript of mitochondrial ribosomal protein L55, human

TSL 5 BASIC

Gene MRPL55, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL55-223	ENST00000459783	UNQ6493/PRO21345	Q6UXR8	122 aa	Predicted RBP	5.81	□□□□□ -1.48
MRPL55-223	ENST00000459783	KRTAP9-2	Q9BYQ4	174 aa		5.81	□□□□□ -1.48
MRPL55-223	ENST00000459783		H0YGX0	51 aa		5.8	□□□□□ -1.48
MRPL55-223	ENST00000459783	C4orf48	Q5BLP8	95 aa		5.8	□□□□□ -1.48
MRPL55-223	ENST00000459783	CLEC2B	Q92478	149 aa		5.8	□□□□□ -1.48
MRPL55-223	ENST00000459783	RPS29	P62273	56 aa	Known RBP	5.79	□□□□□ -1.48
MRPL55-223	ENST00000459783	HRCT1	Q6UXD1	115 aa		5.79	□□□□□ -1.48
MRPL55-223	ENST00000459783	KRTAP9-6	A0A140TA67	174 aa		5.78	□□□□□ -1.48
MRPL55-223	ENST00000459783	IGLV8-61	A0A075B6I0	122 aa		5.77	□□□□□ -1.49
MRPL55-223	ENST00000459783	IGLV7-46	A0A075B6I9	117 aa		5.77	□□□□□ -1.49
MRPL55-223	ENST00000459783		A0A1B0GX51	115 aa		5.75	□□□□□ -1.49
MRPL55-223	ENST00000459783	TSTD3	H0UI37	97 aa		5.75	□□□□□ -1.49
MRPL55-223	ENST00000459783		H3BUT2	72 aa		5.75	□□□□□ -1.49
MRPL55-223	ENST00000459783	PSMB2	P49721	201 aa		5.75	□□□□□ -1.49
MRPL55-223	ENST00000459783	CD164	Q04900	197 aa		5.75	□□□□□ -1.49
MRPL55-223	ENST00000459783	OCIAD2	Q56VL3	154 aa		5.75	□□□□□ -1.49
MRPL55-223	ENST00000459783	IGFL1	Q6UW32	110 aa		5.75	□□□□□ -1.49
MRPL55-223	ENST00000459783	PPDPFL	Q8WWR9	84 aa		5.75	□□□□□ -1.49
MRPL55-223	ENST00000459783	NAA38	Q9BRA0	125 aa	Known RBP	5.75	□□□□□ -1.49
MRPL55-223	ENST00000459783		M0R143	59 aa		5.74	□□□□□ -1.49
MRPL55-223	ENST00000459783		F8WEM9	126 aa		5.73	□□□□□ -1.49
MRPL55-223	ENST00000459783	TPRXL	Q17RH7	258 aa		5.73	□□□□□ -1.49
MRPL55-223	ENST00000459783	KRTAP13-3	Q3SY46	172 aa		5.73	□□□□□ -1.49
MRPL55-223	ENST00000459783	FP248	Q71RG6	208 aa	Predicted RBP	5.73	□□□□□ -1.49
MRPL55-223	ENST00000459783	SNHG12	Q9BXW3	62 aa		5.72	□□□□□ -1.49
MRPL55-223	ENST00000459783	LST1	O00453	97 aa		5.71	□□□□□ -1.5
MRPL55-223	ENST00000459783	NDUFV3	P56181	108 aa	Known RBP	5.71	□□□□□ -1.5
MRPL55-223	ENST00000459783		Q5XG85	94 aa		5.71	□□□□□ -1.5
MRPL55-223	ENST00000459783		Q6JHZ5	121 aa		5.71	□□□□□ -1.5
MRPL55-223	ENST00000459783	COX6C	P09669	75 aa		5.7	□□□□□ -1.5
MRPL55-223	ENST00000459783	BATF	Q16520	125 aa		5.7	□□□□□ -1.5
MRPL55-223	ENST00000459783	LIMD2	Q9BT23	127 aa		5.7	□□□□□ -1.5
MRPL55-223	ENST00000459783	SNCG	O76070	127 aa		5.69	□□□□□ -1.5
MRPL55-223	ENST00000459783	TRAC	P01848	142 aa		5.69	□□□□□ -1.5
MRPL55-223	ENST00000459783	FABP2	P12104	132 aa		5.69	□□□□□ -1.5
MRPL55-223	ENST00000459783	C1orf195	Q5TG92	126 aa		5.69	□□□□□ -1.5
MRPL55-223	ENST00000459783	TRBV7-7	A0A0K0K1E9	115 aa		5.68	□□□□□ -1.5
MRPL55-223	ENST00000459783	TCL1B	O95988	128 aa		5.68	□□□□□ -1.5
MRPL55-223	ENST00000459783	SCGB1C2	P0DMR2	95 aa		5.68	□□□□□ -1.5
MRPL55-223	ENST00000459783	ORMDL1	Q9P0S3	153 aa		5.68	□□□□□ -1.5
MRPL55-223	ENST00000459783		H3BMG7	143 aa		5.67	□□□□□ -1.5
MRPL55-223	ENST00000459783		A0A1B0GV72	72 aa		5.66	□□□□□ -1.5
MRPL55-223	ENST00000459783		A0A1W2PNM2	257 aa		5.66	□□□□□ -1.5
MRPL55-223	ENST00000459783	TAX1BP3	O14907	124 aa		5.66	□□□□□ -1.5
MRPL55-223	ENST00000459783	DNAL4	O96015	105 aa		5.66	□□□□□ -1.5
MRPL55-223	ENST00000459783	CDIP1	Q9H305	208 aa		5.66	□□□□□ -1.5
MRPL55-223	ENST00000459783		Q6Q795	121 aa		5.64	□□□□□ -1.51
MRPL55-223	ENST00000459783	TMEM256-PLSCR3	K7ERE1	68 aa		5.63	□□□□□ -1.51
MRPL55-223	ENST00000459783	UBE2V1	Q13404	147 aa		5.63	□□□□□ -1.51
MRPL55-223	ENST00000459783	ASB16-AS1	Q495Z4	193 aa		5.63	□□□□□ -1.51
MRPL55-223	ENST00000459783	C9orf118	A6NHY6	69 aa		5.62	□□□□□ -1.51
MRPL55-223	ENST00000459783	GHRH	P01286	108 aa		5.62	□□□□□ -1.51
MRPL55-223	ENST00000459783	BAALC-AS2	P0C853	105 aa		5.62	□□□□□ -1.51
MRPL55-223	ENST00000459783	XP32	Q5T750	250 aa		5.62	□□□□□ -1.51
MRPL55-223	ENST00000459783	TEN1	Q86WV5	123 aa		5.62	□□□□□ -1.51
MRPL55-223	ENST00000459783	FAT4	Q6V0I7	4981 aa		5.62	□□□□□ -1.51
MRPL55-223	ENST00000459783	C9orf92	A6NGG3	77 aa		5.61	□□□□□ -1.51
MRPL55-223	ENST00000459783		H3BQ85	93 aa		5.61	□□□□□ -1.51
MRPL55-223	ENST00000459783	ATXN8	Q156A1	80 aa		5.61	□□□□□ -1.51
MRPL55-223	ENST00000459783		A0A087WSZ3	146 aa		5.6	□□□□□ -1.51
MRPL55-223	ENST00000459783	TRBV7-4	A0A0J9YYF1	115 aa		5.6	□□□□□ -1.51
MRPL55-223	ENST00000459783	ANKRD29	Q8N6D5	301 aa		5.6	□□□□□ -1.51
MRPL55-223	ENST00000459783		Q96NJ1	140 aa		5.6	□□□□□ -1.51
MRPL55-223	ENST00000459783	MUC17	Q685J3	4493 aa		5.59	□□□□□ -1.51
MRPL55-223	ENST00000459783		A0A1W2PPM0	123 aa		5.59	□□□□□ -1.51
MRPL55-223	ENST00000459783	KRTAP4-1	Q9BYQ7	146 aa		5.59	□□□□□ -1.51
MRPL55-223	ENST00000459783		C9JAW5	83 aa		5.57	□□□□□ -1.52
MRPL55-223	ENST00000459783	TRBV20-1	A0A075B6N2	111 aa		5.56	□□□□□ -1.52
MRPL55-223	ENST00000459783	CCK	P06307	115 aa		5.56	□□□□□ -1.52
MRPL55-223	ENST00000459783	LYRM7	Q5U5X0	104 aa		5.56	□□□□□ -1.52
MRPL55-223	ENST00000459783	MTURN	Q8N3F0	131 aa		5.56	□□□□□ -1.52
MRPL55-223	ENST00000459783	PCP4L1	A6NKN8	68 aa		5.55	□□□□□ -1.52
MRPL55-223	ENST00000459783	RBM3	P98179	157 aa	Known RBP	5.55	□□□□□ -1.52
MRPL55-223	ENST00000459783	SS18L2	Q9UHA2	77 aa		5.55	□□□□□ -1.52
MRPL55-223	ENST00000459783	MUC2	Q02817	5179 aa		5.54	□□□□□ -1.52
MRPL55-223	ENST00000459783	OBSCN-AS1	Q96MR7	158 aa		5.54	□□□□□ -1.52
MRPL55-223	ENST00000459783	COL5A1-AS1	Q5SY13	56 aa		5.53	□□□□□ -1.52
MRPL55-223	ENST00000459783		Q6ZQT0	140 aa		5.53	□□□□□ -1.52
MRPL55-223	ENST00000459783	LINC00472	Q9H8W2	130 aa		5.52	□□□□□ -1.53
MRPL55-223	ENST00000459783	LOC110117498	A0A087WWA1	95 aa		5.51	□□□□□ -1.53
MRPL55-223	ENST00000459783	SMCP	P49901	116 aa	Predicted RBP	5.51	□□□□□ -1.53
MRPL55-223	ENST00000459783	DSCR8	Q96T75	97 aa		5.51	□□□□□ -1.53
MRPL55-223	ENST00000459783	VPS25	Q9BRG1	176 aa		5.51	□□□□□ -1.53
MRPL55-223	ENST00000459783	C14orf132	Q9NPU4	83 aa		5.51	□□□□□ -1.53
MRPL55-223	ENST00000459783	SPCS1	Q9Y6A9	102 aa		5.51	□□□□□ -1.53
MRPL55-223	ENST00000459783	JMJD7-PLA2G4B	H0Y9G9	81 aa		5.5	□□□□□ -1.53
MRPL55-223	ENST00000459783		H3BT86	120 aa		5.5	□□□□□ -1.53
MRPL55-223	ENST00000459783	SEC61B	P60468	96 aa	Known RBP	5.5	□□□□□ -1.53
MRPL55-223	ENST00000459783	DEFB116	Q30KQ4	102 aa		5.5	□□□□□ -1.53
MRPL55-223	ENST00000459783	PCOTH	Q58A44	107 aa		5.5	□□□□□ -1.53
MRPL55-223	ENST00000459783	FSIP2	Q5CZC0	6907 aa		5.5	□□□□□ -1.53
MRPL55-223	ENST00000459783	RPL37	P61927	97 aa	Known RBP	5.49	□□□□□ -1.53
MRPL55-223	ENST00000459783	PRO0461	Q9UI25	63 aa		5.49	□□□□□ -1.53
MRPL55-223	ENST00000459783	NOTCH2NL	Q7Z3S9	236 aa		5.48	□□□□□ -1.53
MRPL55-223	ENST00000459783		K7EP34	96 aa		5.47	□□□□□ -1.53
MRPL55-223	ENST00000459783	IGKV4-1	P06312	121 aa		5.47	□□□□□ -1.53
MRPL55-223	ENST00000459783	DSCR10	P59022	87 aa		5.47	□□□□□ -1.53
MRPL55-223	ENST00000459783	SIGMAR1	Q99720	223 aa		5.47	□□□□□ -1.53
MRPL55-223	ENST00000459783	KRTAP16-1	A8MUX0	517 aa		5.45	□□□□□ -1.54
MRPL55-223	ENST00000459783	PDE6G	P18545	87 aa		5.43	□□□□□ -1.54

Retrieved 100 of 20,778 RNA–protein pairs in 120.3 ms