RNA–Protein interactions for RNA: ENST00000457566.1

RFX3-AS1-203, RFX3 antisense RNA 1, humanhuman

TSL 3

Gene RFX3-AS1, Length 496 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-AS1-203ENST00000457566 PRO1933Q9H354 126 aa1.52□□□□□ -2.17
RFX3-AS1-203ENST00000457566 NXT2Q9NPJ8 142 aaKnown RBP1.52□□□□□ -2.17
RFX3-AS1-203ENST00000457566 PLIN4Q96Q06 1357 aa1.51□□□□□ -2.17
RFX3-AS1-203ENST00000457566 UQCRHLA0A096LP55 91 aa1.51□□□□□ -2.17
RFX3-AS1-203ENST00000457566 F2Z2F3 143 aa1.51□□□□□ -2.17
RFX3-AS1-203ENST00000457566 BCE1O60756 84 aa1.51□□□□□ -2.17
RFX3-AS1-203ENST00000457566 COX17Q14061 63 aa1.51□□□□□ -2.17
RFX3-AS1-203ENST00000457566 RABAC1Q9UI14 185 aa1.51□□□□□ -2.17
RFX3-AS1-203ENST00000457566 WNK2Q9Y3S1 2297 aa1.51□□□□□ -2.17
RFX3-AS1-203ENST00000457566 LYSTQ99698 3801 aa1.5□□□□□ -2.17
RFX3-AS1-203ENST00000457566 KMT2DO14686 5537 aa1.5□□□□□ -2.17
RFX3-AS1-203ENST00000457566 ZNF236Q9UL36 1845 aa1.5□□□□□ -2.17
RFX3-AS1-203ENST00000457566 GVQW2A0A096LPI5 108 aaPredicted RBP1.5□□□□□ -2.17
RFX3-AS1-203ENST00000457566 LCE6AA0A183 80 aa1.5□□□□□ -2.17
RFX3-AS1-203ENST00000457566 UQCRHP07919 91 aa1.5□□□□□ -2.17
RFX3-AS1-203ENST00000457566 C20orf78Q9BR46 151 aa1.5□□□□□ -2.17
RFX3-AS1-203ENST00000457566 PKHD1P08F94 4074 aa1.5□□□□□ -2.17
RFX3-AS1-203ENST00000457566 ANKARQ7Z5J8 1434 aa1.49□□□□□ -2.17
RFX3-AS1-203ENST00000457566 ANKRD50Q9ULJ7 1429 aa1.49□□□□□ -2.17
RFX3-AS1-203ENST00000457566 PLCE1Q9P212 2302 aa1.49□□□□□ -2.17
RFX3-AS1-203ENST00000457566 A0A0G2JND7 137 aa1.49□□□□□ -2.17
RFX3-AS1-203ENST00000457566 CTXND1A0A1B0GTU2 59 aa1.49□□□□□ -2.17
RFX3-AS1-203ENST00000457566 LY6G6CO95867 125 aa1.49□□□□□ -2.17
RFX3-AS1-203ENST00000457566 PMCHL1Q16048 86 aa1.49□□□□□ -2.17
RFX3-AS1-203ENST00000457566 ARL2-SNX15V9GYD0 113 aa1.49□□□□□ -2.17
RFX3-AS1-203ENST00000457566 PDCD11Q14690 1871 aaKnown RBP1.48□□□□□ -2.17
RFX3-AS1-203ENST00000457566 MGPP08493 103 aa1.48□□□□□ -2.17
RFX3-AS1-203ENST00000457566 ZNF137PP52743 207 aa1.48□□□□□ -2.17
RFX3-AS1-203ENST00000457566 FAM223AQ8IWN6 122 aa1.48□□□□□ -2.17
RFX3-AS1-203ENST00000457566 RGPD2P0DJD1 1756 aa1.48□□□□□ -2.17
RFX3-AS1-203ENST00000457566 F5P12259 2224 aa1.48□□□□□ -2.17
RFX3-AS1-203ENST00000457566 CYB5AP00167 134 aa1.47□□□□□ -2.17
RFX3-AS1-203ENST00000457566 LELP1Q5T871 98 aa1.47□□□□□ -2.17
RFX3-AS1-203ENST00000457566 Q6ZRX8 168 aa1.47□□□□□ -2.17
RFX3-AS1-203ENST00000457566 EDC4Q6P2E9 1401 aaKnown RBP1.47□□□□□ -2.17
RFX3-AS1-203ENST00000457566 HSPG2P98160 4391 aa1.46□□□□□ -2.18
RFX3-AS1-203ENST00000457566 FAM223BA6NKX1 122 aa1.46□□□□□ -2.18
RFX3-AS1-203ENST00000457566 C10orf142B7Z368 130 aa1.46□□□□□ -2.18
RFX3-AS1-203ENST00000457566 NMBP08949 121 aa1.46□□□□□ -2.18
RFX3-AS1-203ENST00000457566 CFAP126Q5VTH2 177 aa1.46□□□□□ -2.18
RFX3-AS1-203ENST00000457566 SFTA2Q6UW10 78 aa1.46□□□□□ -2.18
RFX3-AS1-203ENST00000457566 S100A16Q96FQ6 103 aaKnown RBP1.46□□□□□ -2.18
RFX3-AS1-203ENST00000457566 SPRR4Q96PI1 79 aa1.46□□□□□ -2.18
RFX3-AS1-203ENST00000457566 LAMA4Q16363 1823 aa1.45□□□□□ -2.18
RFX3-AS1-203ENST00000457566 PIN1P1O15428 100 aa1.45□□□□□ -2.18
RFX3-AS1-203ENST00000457566 SPINT3P49223 89 aa1.45□□□□□ -2.18
RFX3-AS1-203ENST00000457566 PEA15Q15121 130 aa1.45□□□□□ -2.18
RFX3-AS1-203ENST00000457566 ANK3Q12955 4377 aaKnown RBP1.44□□□□□ -2.18
RFX3-AS1-203ENST00000457566 ROS1P08922 2347 aa1.44□□□□□ -2.18
RFX3-AS1-203ENST00000457566 SMIM11AP58511 58 aa1.44□□□□□ -2.18
RFX3-AS1-203ENST00000457566 PSMG4Q5JS54 123 aa1.44□□□□□ -2.18
RFX3-AS1-203ENST00000457566 LINC00472Q9H8W2 130 aa1.44□□□□□ -2.18
RFX3-AS1-203ENST00000457566 MYO7BQ6PIF6 2116 aa1.43□□□□□ -2.18
RFX3-AS1-203ENST00000457566 USF3Q68DE3 2245 aa1.43□□□□□ -2.18
RFX3-AS1-203ENST00000457566 AHNAKQ09666 5890 aaKnown RBP1.43□□□□□ -2.18
RFX3-AS1-203ENST00000457566 A0A1B0GWA3 101 aa1.43□□□□□ -2.18
RFX3-AS1-203ENST00000457566 ZNF815PA8K554 130 aa1.43□□□□□ -2.18
RFX3-AS1-203ENST00000457566 G3V318 75 aa1.43□□□□□ -2.18
RFX3-AS1-203ENST00000457566 KRTAP2-3P0C7H8 128 aa1.43□□□□□ -2.18
RFX3-AS1-203ENST00000457566 GCHFRP30047 84 aa1.43□□□□□ -2.18
RFX3-AS1-203ENST00000457566 KRTAP10-4P60372 401 aaPredicted RBP1.43□□□□□ -2.18
RFX3-AS1-203ENST00000457566 HMGN3Q15651 99 aa1.43□□□□□ -2.18
RFX3-AS1-203ENST00000457566 ZNF720Q7Z2F6 126 aa1.43□□□□□ -2.18
RFX3-AS1-203ENST00000457566 LINC01600Q96MT4 127 aa1.43□□□□□ -2.18
RFX3-AS1-203ENST00000457566 KRTAP2-4Q9BYR9 128 aa1.43□□□□□ -2.18
RFX3-AS1-203ENST00000457566 PROK2Q9HC23 129 aa1.43□□□□□ -2.18
RFX3-AS1-203ENST00000457566 LINC00846Q9NV44 126 aa1.43□□□□□ -2.18
RFX3-AS1-203ENST00000457566 HIGD1BQ9P298 99 aa1.43□□□□□ -2.18
RFX3-AS1-203ENST00000457566 USH2AO75445 5202 aa1.43□□□□□ -2.18
RFX3-AS1-203ENST00000457566 FCGBPQ9Y6R7 5405 aaPredicted RBP1.42□□□□□ -2.18
RFX3-AS1-203ENST00000457566 TDRG1Q3Y452 100 aa1.42□□□□□ -2.18
RFX3-AS1-203ENST00000457566 S100A13Q99584 98 aa1.42□□□□□ -2.18
RFX3-AS1-203ENST00000457566 PRR15LQ9BU68 103 aa1.42□□□□□ -2.18
RFX3-AS1-203ENST00000457566 MYCBP2O75592 4640 aa1.42□□□□□ -2.18
RFX3-AS1-203ENST00000457566 CD163L1Q9NR16 1453 aa1.42□□□□□ -2.18
RFX3-AS1-203ENST00000457566 DYNC1H1Q14204 4646 aaKnown RBP1.42□□□□□ -2.18
RFX3-AS1-203ENST00000457566 MYH4Q9Y623 1939 aa1.41□□□□□ -2.18
RFX3-AS1-203ENST00000457566 DNAH9Q9NYC9 4486 aa1.41□□□□□ -2.18
RFX3-AS1-203ENST00000457566 SPINK9Q5DT21 86 aa1.41□□□□□ -2.18
RFX3-AS1-203ENST00000457566 MUC12Q9UKN1 5478 aa1.4□□□□□ -2.19
RFX3-AS1-203ENST00000457566 ETDBQ3ZM63 59 aa1.4□□□□□ -2.19
RFX3-AS1-203ENST00000457566 TMEM263Q8WUH6 116 aaKnown RBP1.4□□□□□ -2.19
RFX3-AS1-203ENST00000457566 FAT2Q9NYQ8 4349 aa1.4□□□□□ -2.19
RFX3-AS1-203ENST00000457566 LRP2P98164 4655 aa1.39□□□□□ -2.19
RFX3-AS1-203ENST00000457566 C7orf77A4D0Y5 90 aa1.39□□□□□ -2.19
RFX3-AS1-203ENST00000457566 H3BQF6 201 aa1.39□□□□□ -2.19
RFX3-AS1-203ENST00000457566 M0R3E3 92 aa1.39□□□□□ -2.19
RFX3-AS1-203ENST00000457566 SNRPFP62306 86 aaKnown RBP1.39□□□□□ -2.19
RFX3-AS1-203ENST00000457566 ALKAL2Q6UX46 152 aa1.39□□□□□ -2.19
RFX3-AS1-203ENST00000457566 FAT3Q8TDW7 4589 aa1.39□□□□□ -2.19
RFX3-AS1-203ENST00000457566 ARMS2P0C7Q2 107 aa1.38□□□□□ -2.19
RFX3-AS1-203ENST00000457566 HUWE1Q7Z6Z7 4374 aaKnown RBP1.37□□□□□ -2.19
RFX3-AS1-203ENST00000457566 F8WEM9 126 aa1.37□□□□□ -2.19
RFX3-AS1-203ENST00000457566 HMGN2P05204 90 aaKnown RBP1.37□□□□□ -2.19
RFX3-AS1-203ENST00000457566 COX6B1P14854 86 aa1.37□□□□□ -2.19
RFX3-AS1-203ENST00000457566 FAT1Q14517 4588 aa1.37□□□□□ -2.19
RFX3-AS1-203ENST00000457566 MUC5BQ9HC84 5762 aaPredicted RBP1.36□□□□□ -2.19
RFX3-AS1-203ENST00000457566 ACYP1P07311 99 aa1.36□□□□□ -2.19
RFX3-AS1-203ENST00000457566 KRTAP5-10Q6L8G5 202 aa1.36□□□□□ -2.19
RFX3-AS1-203ENST00000457566 ST20Q9HBF5 79 aa1.36□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms