RNA–Protein interactions for RNA: ENST00000456246.1

MSH6-207, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 846 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-207ENST00000456246 PPDPFLQ8WWR9 84 aa9.77□□□□□ -0.85
MSH6-207ENST00000456246 C12orf57Q99622 126 aa9.76□□□□□ -0.85
MSH6-207ENST00000456246 C9orf92A6NGG3 77 aa9.75□□□□□ -0.85
MSH6-207ENST00000456246 KRTAP4-1Q9BYQ7 146 aa9.75□□□□□ -0.85
MSH6-207ENST00000456246 IGLV8-61A0A075B6I0 122 aa9.74□□□□□ -0.85
MSH6-207ENST00000456246 A0A0G2JQZ4 141 aa9.74□□□□□ -0.85
MSH6-207ENST00000456246 HIGD1BQ9P298 99 aa9.74□□□□□ -0.85
MSH6-207ENST00000456246 CLEC2BQ92478 149 aa9.73□□□□□ -0.85
MSH6-207ENST00000456246 SNCGO76070 127 aa9.72□□□□□ -0.85
MSH6-207ENST00000456246 SPATA45Q537H7 98 aa9.71□□□□□ -0.86
MSH6-207ENST00000456246 RAB37Q96AX2 223 aa9.71□□□□□ -0.86
MSH6-207ENST00000456246 C14orf144Q96I85 54 aa9.71□□□□□ -0.86
MSH6-207ENST00000456246 VAMP8Q9BV40 100 aa9.71□□□□□ -0.86
MSH6-207ENST00000456246 PAM16Q9Y3D7 125 aa9.71□□□□□ -0.86
MSH6-207ENST00000456246 A0A0B4J2C4 111 aa9.7□□□□□ -0.86
MSH6-207ENST00000456246 OCIAD2Q56VL3 154 aa9.7□□□□□ -0.86
MSH6-207ENST00000456246 CFC1BP0CG36 223 aa9.69□□□□□ -0.86
MSH6-207ENST00000456246 CFC1P0CG37 223 aa9.69□□□□□ -0.86
MSH6-207ENST00000456246 PCOTHQ58A44 107 aa9.69□□□□□ -0.86
MSH6-207ENST00000456246 SNHG12Q9BXW3 62 aa9.69□□□□□ -0.86
MSH6-207ENST00000456246 H0YGX0 51 aa9.68□□□□□ -0.86
MSH6-207ENST00000456246 IGFL1Q6UW32 110 aa9.68□□□□□ -0.86
MSH6-207ENST00000456246 TRBV7-7A0A0K0K1E9 115 aa9.67□□□□□ -0.86
MSH6-207ENST00000456246 TMEM238LA0A1B0GVL6 79 aa9.65□□□□□ -0.86
MSH6-207ENST00000456246 A6NJY4 79 aa9.65□□□□□ -0.86
MSH6-207ENST00000456246 KRTAP9-2Q9BYQ4 174 aa9.65□□□□□ -0.86
MSH6-207ENST00000456246 C2orf91Q6ZV80 131 aa9.64□□□□□ -0.87
MSH6-207ENST00000456246 GHRHP01286 108 aa9.63□□□□□ -0.87
MSH6-207ENST00000456246 RPL37P61927 97 aaKnown RBP9.62□□□□□ -0.87
MSH6-207ENST00000456246 CEND1Q8N111 149 aa9.62□□□□□ -0.87
MSH6-207ENST00000456246 A0A1B0GX51 115 aa9.61□□□□□ -0.87
MSH6-207ENST00000456246 PRO1854Q9UHT4 67 aa9.6□□□□□ -0.87
MSH6-207ENST00000456246 H3BUT2 72 aa9.58□□□□□ -0.88
MSH6-207ENST00000456246 SS18L2Q9UHA2 77 aa9.58□□□□□ -0.88
MSH6-207ENST00000456246 Q6Q795 121 aa9.57□□□□□ -0.88
MSH6-207ENST00000456246 LST1O00453 97 aa9.56□□□□□ -0.88
MSH6-207ENST00000456246 FAM218AQ96MZ4 157 aa9.56□□□□□ -0.88
MSH6-207ENST00000456246 KRTAP3-3Q9BYR6 98 aa9.56□□□□□ -0.88
MSH6-207ENST00000456246 KRTAP3-2Q9BYR7 98 aa9.56□□□□□ -0.88
MSH6-207ENST00000456246 NDUFV3P56181 108 aaKnown RBP9.55□□□□□ -0.88
MSH6-207ENST00000456246 FXYD2P54710 66 aa9.54□□□□□ -0.88
MSH6-207ENST00000456246 LCE2CQ5TA81 110 aa9.54□□□□□ -0.88
MSH6-207ENST00000456246 TEN1Q86WV5 123 aa9.54□□□□□ -0.88
MSH6-207ENST00000456246 HSD52Q0P140 79 aa9.52□□□□□ -0.89
MSH6-207ENST00000456246 KRTAP19-2Q3LHN2 52 aa9.52□□□□□ -0.89
MSH6-207ENST00000456246 PYY3Q5JQD4 70 aa9.51□□□□□ -0.89
MSH6-207ENST00000456246 H3BQ85 93 aa9.5□□□□□ -0.89
MSH6-207ENST00000456246 TRIAP1O43715 76 aa9.5□□□□□ -0.89
MSH6-207ENST00000456246 H3BMG7 143 aa9.49□□□□□ -0.89
MSH6-207ENST00000456246 FABP2P12104 132 aa9.49□□□□□ -0.89
MSH6-207ENST00000456246 DNAL4O96015 105 aa9.48□□□□□ -0.89
MSH6-207ENST00000456246 Q75L30 129 aa9.48□□□□□ -0.89
MSH6-207ENST00000456246 OBSCN-AS1Q96MR7 158 aa9.48□□□□□ -0.89
MSH6-207ENST00000456246 COX6CP09669 75 aa9.46□□□□□ -0.9
MSH6-207ENST00000456246 A0A087WSZ3 146 aa9.45□□□□□ -0.9
MSH6-207ENST00000456246 PSMB2P49721 201 aa9.45□□□□□ -0.9
MSH6-207ENST00000456246 MT1HP80294 61 aa9.45□□□□□ -0.9
MSH6-207ENST00000456246 ATP11AUNQ6ZP68 121 aa9.45□□□□□ -0.9
MSH6-207ENST00000456246 ORMDL1Q9P0S3 153 aa9.44□□□□□ -0.9
MSH6-207ENST00000456246 UQCR10Q9UDW1 63 aa9.43□□□□□ -0.9
MSH6-207ENST00000456246 TMEM256-PLSCR3K7ERE1 68 aa9.41□□□□□ -0.9
MSH6-207ENST00000456246 COX6B2Q6YFQ2 88 aa9.41□□□□□ -0.9
MSH6-207ENST00000456246 K7ERJ3 54 aa9.4□□□□□ -0.9
MSH6-207ENST00000456246 Q96NJ1 140 aa9.4□□□□□ -0.9
MSH6-207ENST00000456246 ANKRD29Q8N6D5 301 aa9.39□□□□□ -0.91
MSH6-207ENST00000456246 TRBV7-4A0A0J9YYF1 115 aa9.38□□□□□ -0.91
MSH6-207ENST00000456246 A0A1W2PNM2 257 aa9.38□□□□□ -0.91
MSH6-207ENST00000456246 TMA7Q9Y2S6 64 aaKnown RBP9.37□□□□□ -0.91
MSH6-207ENST00000456246 C20orf166-AS1Q96NR2 134 aa9.36□□□□□ -0.91
MSH6-207ENST00000456246 KRTAP9-6A0A140TA67 174 aa9.35□□□□□ -0.91
MSH6-207ENST00000456246 UBE2V1Q13404 147 aa9.34□□□□□ -0.91
MSH6-207ENST00000456246 SIGMAR1Q99720 223 aa9.34□□□□□ -0.91
MSH6-207ENST00000456246 A8MUU9 505 aa9.33□□□□□ -0.92
MSH6-207ENST00000456246 TRACP01848 142 aa9.33□□□□□ -0.92
MSH6-207ENST00000456246 M0R2T5 61 aa9.31□□□□□ -0.92
MSH6-207ENST00000456246 CCKP06307 115 aa9.3□□□□□ -0.92
MSH6-207ENST00000456246 A0A1B0GV72 72 aa9.29□□□□□ -0.92
MSH6-207ENST00000456246 SCGB1C2P0DMR2 95 aa9.29□□□□□ -0.92
MSH6-207ENST00000456246 IGKV4-1P06312 121 aa9.28□□□□□ -0.92
MSH6-207ENST00000456246 LORP23490 312 aaPredicted RBP9.27□□□□□ -0.93
MSH6-207ENST00000456246 DSCR10P59022 87 aa9.27□□□□□ -0.93
MSH6-207ENST00000456246 LINC00313P59037 77 aa9.27□□□□□ -0.93
MSH6-207ENST00000456246 KRTAP10-6P60371 365 aaPredicted RBP9.27□□□□□ -0.93
MSH6-207ENST00000456246 RBM3P98179 157 aaKnown RBP9.24□□□□□ -0.93
MSH6-207ENST00000456246 C21orf62-AS1Q17RA5 79 aa9.24□□□□□ -0.93
MSH6-207ENST00000456246 DSCR8Q96T75 97 aa9.24□□□□□ -0.93
MSH6-207ENST00000456246 LINC00472Q9H8W2 130 aa9.24□□□□□ -0.93
MSH6-207ENST00000456246 TRBV20-1A0A075B6N2 111 aa9.22□□□□□ -0.93
MSH6-207ENST00000456246 M0R143 59 aa9.21□□□□□ -0.94
MSH6-207ENST00000456246 VPS25Q9BRG1 176 aa9.2□□□□□ -0.94
MSH6-207ENST00000456246 KRTAP16-1A8MUX0 517 aa9.19□□□□□ -0.94
MSH6-207ENST00000456246 FLGP20930 4061 aaPredicted RBP9.19□□□□□ -0.94
MSH6-207ENST00000456246 BAALC-AS2P0C853 105 aa9.18□□□□□ -0.94
MSH6-207ENST00000456246 C9JAW5 83 aa9.17□□□□□ -0.94
MSH6-207ENST00000456246 DEFB116Q30KQ4 102 aa9.17□□□□□ -0.94
MSH6-207ENST00000456246 C8orf87E5RJ46 101 aa9.16□□□□□ -0.94
MSH6-207ENST00000456246 IGHV6-1A0A0B4J1U7 121 aa9.15□□□□□ -0.94
MSH6-207ENST00000456246 ATXN8Q156A1 80 aa9.15□□□□□ -0.94
MSH6-207ENST00000456246 J3KT08 172 aa9.14□□□□□ -0.95
MSH6-207ENST00000456246 A0A1B0GVX0 72 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 114.6 ms