RNA–Protein interactions for RNA: ENST00000454849.5

MSH2-203, Transcript of mutS homolog 2, humanhuman

TSL 4

Gene MSH2, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-203ENST00000454849 A0A0B4J2C4 111 aa13.78□□□□□ -0.2
MSH2-203ENST00000454849 F8WEM9 126 aa13.78□□□□□ -0.2
MSH2-203ENST00000454849 FXYD2P54710 66 aa13.77□□□□□ -0.21
MSH2-203ENST00000454849 MUC17Q685J3 4493 aa13.75□□□□□ -0.21
MSH2-203ENST00000454849 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP13.75□□□□□ -0.21
MSH2-203ENST00000454849 FAM218AQ96MZ4 157 aa13.73□□□□□ -0.21
MSH2-203ENST00000454849 PRO1854Q9UHT4 67 aa13.72□□□□□ -0.21
MSH2-203ENST00000454849 C9orf92A6NGG3 77 aa13.71□□□□□ -0.21
MSH2-203ENST00000454849 TMEM238LA0A1B0GVL6 79 aa13.69□□□□□ -0.22
MSH2-203ENST00000454849 A6NJY4 79 aa13.69□□□□□ -0.22
MSH2-203ENST00000454849 OCIAD2Q56VL3 154 aa13.69□□□□□ -0.22
MSH2-203ENST00000454849 XP32Q5T750 250 aa13.69□□□□□ -0.22
MSH2-203ENST00000454849 C1orf195Q5TG92 126 aa13.69□□□□□ -0.22
MSH2-203ENST00000454849 SNHG12Q9BXW3 62 aa13.69□□□□□ -0.22
MSH2-203ENST00000454849 H3BUT2 72 aa13.67□□□□□ -0.22
MSH2-203ENST00000454849 ASB16-AS1Q495Z4 193 aa13.67□□□□□ -0.22
MSH2-203ENST00000454849 IGFL1Q6UW32 110 aa13.67□□□□□ -0.22
MSH2-203ENST00000454849 H0YGX0 51 aa13.66□□□□□ -0.22
MSH2-203ENST00000454849 K7ERJ3 54 aa13.66□□□□□ -0.22
MSH2-203ENST00000454849 HSD52Q0P140 79 aa13.65□□□□□ -0.22
MSH2-203ENST00000454849 Q5XG85 94 aa13.65□□□□□ -0.22
MSH2-203ENST00000454849 IGLV8-61A0A075B6I0 122 aa13.64□□□□□ -0.23
MSH2-203ENST00000454849 A0A0U1RQV1 116 aa13.63□□□□□ -0.23
MSH2-203ENST00000454849 TRIAP1O43715 76 aa13.63□□□□□ -0.23
MSH2-203ENST00000454849 Q6JHZ5 121 aa13.63□□□□□ -0.23
MSH2-203ENST00000454849 SEC61BP60468 96 aaKnown RBP13.62□□□□□ -0.23
MSH2-203ENST00000454849 CLEC2BQ92478 149 aa13.62□□□□□ -0.23
MSH2-203ENST00000454849 KRTAP4-1Q9BYQ7 146 aa13.62□□□□□ -0.23
MSH2-203ENST00000454849 SNCGO76070 127 aa13.61□□□□□ -0.23
MSH2-203ENST00000454849 PPDPFLQ8WWR9 84 aa13.61□□□□□ -0.23
MSH2-203ENST00000454849 UQCR10Q9UDW1 63 aa13.61□□□□□ -0.23
MSH2-203ENST00000454849 TCL1BO95988 128 aa13.6□□□□□ -0.23
MSH2-203ENST00000454849 TRBV7-7A0A0K0K1E9 115 aa13.57□□□□□ -0.24
MSH2-203ENST00000454849 PSMB2P49721 201 aa13.55□□□□□ -0.24
MSH2-203ENST00000454849 FABP2P12104 132 aa13.54□□□□□ -0.24
MSH2-203ENST00000454849 NDUFV3P56181 108 aaKnown RBP13.54□□□□□ -0.24
MSH2-203ENST00000454849 FAT4Q6V0I7 4981 aa13.53□□□□□ -0.24
MSH2-203ENST00000454849 A0A1B0GX51 115 aa13.49□□□□□ -0.25
MSH2-203ENST00000454849 PCOTHQ58A44 107 aa13.49□□□□□ -0.25
MSH2-203ENST00000454849 H3BMG7 143 aa13.47□□□□□ -0.25
MSH2-203ENST00000454849 A0A1B0GV72 72 aa13.46□□□□□ -0.25
MSH2-203ENST00000454849 DNAL4O96015 105 aa13.42□□□□□ -0.26
MSH2-203ENST00000454849 COX6CP09669 75 aa13.42□□□□□ -0.26
MSH2-203ENST00000454849 LCE2AQ5TA79 106 aaPredicted RBP13.41□□□□□ -0.26
MSH2-203ENST00000454849 ORMDL1Q9P0S3 153 aa13.4□□□□□ -0.26
MSH2-203ENST00000454849 LST1O00453 97 aa13.39□□□□□ -0.27
MSH2-203ENST00000454849 GHRHP01286 108 aa13.39□□□□□ -0.27
MSH2-203ENST00000454849 TEN1Q86WV5 123 aa13.38□□□□□ -0.27
MSH2-203ENST00000454849 SCGB1C2P0DMR2 95 aa13.37□□□□□ -0.27
MSH2-203ENST00000454849 Q6Q795 121 aa13.37□□□□□ -0.27
MSH2-203ENST00000454849 A0A087WSZ3 146 aa13.36□□□□□ -0.27
MSH2-203ENST00000454849 A0A1W2PNM2 257 aa13.34□□□□□ -0.27
MSH2-203ENST00000454849 OBSCN-AS1Q96MR7 158 aa13.33□□□□□ -0.28
MSH2-203ENST00000454849 RPL37P61927 97 aaKnown RBP13.32□□□□□ -0.28
MSH2-203ENST00000454849 ANKRD29Q8N6D5 301 aa13.3□□□□□ -0.28
MSH2-203ENST00000454849 NAA38Q9BRA0 125 aaKnown RBP13.3□□□□□ -0.28
MSH2-203ENST00000454849 SS18L2Q9UHA2 77 aa13.3□□□□□ -0.28
MSH2-203ENST00000454849 TMEM256-PLSCR3K7ERE1 68 aa13.29□□□□□ -0.28
MSH2-203ENST00000454849 SMIM6P0DI80 62 aa13.29□□□□□ -0.28
MSH2-203ENST00000454849 H3BQ85 93 aa13.25□□□□□ -0.29
MSH2-203ENST00000454849 TRACP01848 142 aa13.25□□□□□ -0.29
MSH2-203ENST00000454849 M0R143 59 aa13.24□□□□□ -0.29
MSH2-203ENST00000454849 Q96NJ1 140 aa13.24□□□□□ -0.29
MSH2-203ENST00000454849 UBE2V1Q13404 147 aa13.21□□□□□ -0.29
MSH2-203ENST00000454849 CCKP06307 115 aa13.18□□□□□ -0.3
MSH2-203ENST00000454849 BAALC-AS2P0C853 105 aa13.18□□□□□ -0.3
MSH2-203ENST00000454849 LCE2CQ5TA81 110 aa13.18□□□□□ -0.3
MSH2-203ENST00000454849 TRBV7-4A0A0J9YYF1 115 aa13.17□□□□□ -0.3
MSH2-203ENST00000454849 LOC105371267A0A1B0GV96 52 aa13.17□□□□□ -0.3
MSH2-203ENST00000454849 KRTAP19-2Q3LHN2 52 aa13.17□□□□□ -0.3
MSH2-203ENST00000454849 SIGMAR1Q99720 223 aa13.16□□□□□ -0.3
MSH2-203ENST00000454849 VPS25Q9BRG1 176 aa13.16□□□□□ -0.3
MSH2-203ENST00000454849 BATFQ16520 125 aa13.15□□□□□ -0.3
MSH2-203ENST00000454849 DEFB116Q30KQ4 102 aa13.15□□□□□ -0.3
MSH2-203ENST00000454849 DSCR10P59022 87 aa13.13□□□□□ -0.31
MSH2-203ENST00000454849 TSTD3H0UI37 97 aa13.12□□□□□ -0.31
MSH2-203ENST00000454849 RBM3P98179 157 aaKnown RBP13.12□□□□□ -0.31
MSH2-203ENST00000454849 IGKV4-1P06312 121 aa13.11□□□□□ -0.31
MSH2-203ENST00000454849 Q75L30 129 aa13.11□□□□□ -0.31
MSH2-203ENST00000454849 ATP11AUNQ6ZP68 121 aa13.1□□□□□ -0.31
MSH2-203ENST00000454849 ATXN8Q156A1 80 aa13.09□□□□□ -0.31
MSH2-203ENST00000454849 DSCR8Q96T75 97 aa13.08□□□□□ -0.32
MSH2-203ENST00000454849 LINC00472Q9H8W2 130 aa13.04□□□□□ -0.32
MSH2-203ENST00000454849 NOTCH2NLQ7Z3S9 236 aa13.02□□□□□ -0.33
MSH2-203ENST00000454849 C20orf166-AS1Q96NR2 134 aa13.02□□□□□ -0.33
MSH2-203ENST00000454849 C9JAW5 83 aa13.01□□□□□ -0.33
MSH2-203ENST00000454849 KRTAP9-2Q9BYQ4 174 aa13.01□□□□□ -0.33
MSH2-203ENST00000454849 A8MUU9 505 aa13□□□□□ -0.33
MSH2-203ENST00000454849 MT1HP80294 61 aa13□□□□□ -0.33
MSH2-203ENST00000454849 LINC00313P59037 77 aa12.99□□□□□ -0.33
MSH2-203ENST00000454849 IGHV6-1A0A0B4J1U7 121 aa12.96□□□□□ -0.33
MSH2-203ENST00000454849 COX6B2Q6YFQ2 88 aa12.96□□□□□ -0.33
MSH2-203ENST00000454849 KRTAP16-1A8MUX0 517 aa12.92□□□□□ -0.34
MSH2-203ENST00000454849 LYRM7Q5U5X0 104 aa12.92□□□□□ -0.34
MSH2-203ENST00000454849 Q6ZQT0 140 aa12.91□□□□□ -0.34
MSH2-203ENST00000454849 JMJD7-PLA2G4BH0Y9G9 81 aa12.9□□□□□ -0.34
MSH2-203ENST00000454849 TAX1BP3O14907 124 aa12.9□□□□□ -0.34
MSH2-203ENST00000454849 C14orf132Q9NPU4 83 aa12.9□□□□□ -0.34
MSH2-203ENST00000454849 TRBV20-1A0A075B6N2 111 aa12.89□□□□□ -0.35
MSH2-203ENST00000454849 C9orf118A6NHY6 69 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms