RNA–Protein interactions for RNA: ENST00000454398.1

HLA-DPA3-207, Transcript of major histocompatibility complex, class II, DP alpha 3 (pseudogene), humanhuman

BASIC

Gene HLA-DPA3, Length 229 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA3-207ENST00000454398 ARL17AQ8IVW1 177 aa3.28□□□□□ -1.88
HLA-DPA3-207ENST00000454398 SS18L2Q9UHA2 77 aa3.28□□□□□ -1.88
HLA-DPA3-207ENST00000454398 SSPOA2VEC9 5147 aa3.27□□□□□ -1.89
HLA-DPA3-207ENST00000454398 MYMXA0A1B0GTQ4 84 aa3.27□□□□□ -1.89
HLA-DPA3-207ENST00000454398 LINC01549A6NIU2 74 aa3.27□□□□□ -1.89
HLA-DPA3-207ENST00000454398 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.27□□□□□ -1.89
HLA-DPA3-207ENST00000454398 B5MCH6 92 aa3.27□□□□□ -1.89
HLA-DPA3-207ENST00000454398 PLNP26678 52 aa3.27□□□□□ -1.89
HLA-DPA3-207ENST00000454398 KRTAP10-6P60371 365 aaPredicted RBP3.27□□□□□ -1.89
HLA-DPA3-207ENST00000454398 SCGB1D4Q6XE38 83 aa3.27□□□□□ -1.89
HLA-DPA3-207ENST00000454398 ST20-AS1Q8NBB2 130 aa3.27□□□□□ -1.89
HLA-DPA3-207ENST00000454398 ANAPC13Q9BS18 74 aa3.27□□□□□ -1.89
HLA-DPA3-207ENST00000454398 KCNQ1DNQ9H478 68 aa3.27□□□□□ -1.89
HLA-DPA3-207ENST00000454398 PRO0461Q9UI25 63 aa3.27□□□□□ -1.89
HLA-DPA3-207ENST00000454398 TMEM223A0PJW6 202 aa3.26□□□□□ -1.89
HLA-DPA3-207ENST00000454398 ZNF815PA8K554 130 aa3.26□□□□□ -1.89
HLA-DPA3-207ENST00000454398 SLC25A20O43772 301 aa3.26□□□□□ -1.89
HLA-DPA3-207ENST00000454398 HERVK_113P61574 105 aa3.26□□□□□ -1.89
HLA-DPA3-207ENST00000454398 NPC2P61916 151 aa3.26□□□□□ -1.89
HLA-DPA3-207ENST00000454398 PPDPFLQ8WWR9 84 aa3.26□□□□□ -1.89
HLA-DPA3-207ENST00000454398 SCGB1C2P0DMR2 95 aa3.25□□□□□ -1.89
HLA-DPA3-207ENST00000454398 SMCPP49901 116 aaPredicted RBP3.25□□□□□ -1.89
HLA-DPA3-207ENST00000454398 Q6ZRX8 168 aa3.25□□□□□ -1.89
HLA-DPA3-207ENST00000454398 ANKRD29Q8N6D5 301 aa3.25□□□□□ -1.89
HLA-DPA3-207ENST00000454398 USH2AO75445 5202 aa3.25□□□□□ -1.89
HLA-DPA3-207ENST00000454398 TRAV12-1A0A0B4J245 112 aa3.24□□□□□ -1.89
HLA-DPA3-207ENST00000454398 H7C2G1 150 aa3.24□□□□□ -1.89
HLA-DPA3-207ENST00000454398 M0R2T5 61 aa3.24□□□□□ -1.89
HLA-DPA3-207ENST00000454398 EIF4EBP3O60516 100 aaPredicted RBP3.24□□□□□ -1.89
HLA-DPA3-207ENST00000454398 TCL1BO95988 128 aa3.24□□□□□ -1.89
HLA-DPA3-207ENST00000454398 Q1RN00 199 aa3.24□□□□□ -1.89
HLA-DPA3-207ENST00000454398 TEN1Q86WV5 123 aa3.24□□□□□ -1.89
HLA-DPA3-207ENST00000454398 A0A0G2JQZ4 141 aa3.23□□□□□ -1.89
HLA-DPA3-207ENST00000454398 SNCGO76070 127 aa3.23□□□□□ -1.89
HLA-DPA3-207ENST00000454398 CFC1BP0CG36 223 aa3.23□□□□□ -1.89
HLA-DPA3-207ENST00000454398 RPS29P62273 56 aaKnown RBP3.23□□□□□ -1.89
HLA-DPA3-207ENST00000454398 TRAV23DV6A0A075B6W5 121 aa3.22□□□□□ -1.89
HLA-DPA3-207ENST00000454398 C9JAW5 83 aa3.22□□□□□ -1.89
HLA-DPA3-207ENST00000454398 LGALS3P17931 250 aaKnown RBP3.22□□□□□ -1.89
HLA-DPA3-207ENST00000454398 SOSTDC1Q6X4U4 206 aa3.22□□□□□ -1.89
HLA-DPA3-207ENST00000454398 TRBV20-1A0A075B6N2 111 aa3.21□□□□□ -1.9
HLA-DPA3-207ENST00000454398 IGLV6-57P01721 117 aa3.21□□□□□ -1.9
HLA-DPA3-207ENST00000454398 S100A7L2Q5SY68 101 aa3.21□□□□□ -1.9
HLA-DPA3-207ENST00000454398 COX6B2Q6YFQ2 88 aa3.21□□□□□ -1.9
HLA-DPA3-207ENST00000454398 SSBP3-AS1Q7Z2R9 100 aa3.21□□□□□ -1.9
HLA-DPA3-207ENST00000454398 CCDC179H3BU77 68 aa3.2□□□□□ -1.9
HLA-DPA3-207ENST00000454398 ZNF73O43830 326 aaPredicted RBP3.2□□□□□ -1.9
HLA-DPA3-207ENST00000454398 CFC1P0CG37 223 aa3.2□□□□□ -1.9
HLA-DPA3-207ENST00000454398 HERV-K104P63124 156 aa3.2□□□□□ -1.9
HLA-DPA3-207ENST00000454398 ATXN8Q156A1 80 aa3.2□□□□□ -1.9
HLA-DPA3-207ENST00000454398 PRO1854Q9UHT4 67 aa3.2□□□□□ -1.9
HLA-DPA3-207ENST00000454398 TRBV10-2A0A0K0K1G8 114 aa3.19□□□□□ -1.9
HLA-DPA3-207ENST00000454398 J3QQQ9 107 aa3.19□□□□□ -1.9
HLA-DPA3-207ENST00000454398 IFITM1P13164 125 aa3.19□□□□□ -1.9
HLA-DPA3-207ENST00000454398 NDUFV3P56181 108 aaKnown RBP3.19□□□□□ -1.9
HLA-DPA3-207ENST00000454398 SMIM20Q8N5G0 67 aa3.19□□□□□ -1.9
HLA-DPA3-207ENST00000454398 LIMD2Q9BT23 127 aa3.19□□□□□ -1.9
HLA-DPA3-207ENST00000454398 LEPROTO15243 131 aa3.18□□□□□ -1.9
HLA-DPA3-207ENST00000454398 ADAMTSL4-AS1Q5T5F5 129 aa3.18□□□□□ -1.9
HLA-DPA3-207ENST00000454398 MUSTN1Q8IVN3 82 aa3.18□□□□□ -1.9
HLA-DPA3-207ENST00000454398 DEFB105AQ8NG35 78 aa3.18□□□□□ -1.9
HLA-DPA3-207ENST00000454398 FCGBPQ9Y6R7 5405 aaPredicted RBP3.18□□□□□ -1.9
HLA-DPA3-207ENST00000454398 A0A0B4J2C4 111 aa3.17□□□□□ -1.9
HLA-DPA3-207ENST00000454398 RPL37P61927 97 aaKnown RBP3.17□□□□□ -1.9
HLA-DPA3-207ENST00000454398 Q6Q795 121 aa3.17□□□□□ -1.9
HLA-DPA3-207ENST00000454398 A0A0J9YXY3 114 aa3.16□□□□□ -1.9
HLA-DPA3-207ENST00000454398 TRIAP1O43715 76 aa3.16□□□□□ -1.9
HLA-DPA3-207ENST00000454398 OR13C6PQ8NH95 151 aa3.16□□□□□ -1.9
HLA-DPA3-207ENST00000454398 TEX49A0A1B0GTD5 131 aa3.15□□□□□ -1.91
HLA-DPA3-207ENST00000454398 H3BT86 120 aa3.15□□□□□ -1.91
HLA-DPA3-207ENST00000454398 NDUFC2O95298 119 aa3.15□□□□□ -1.91
HLA-DPA3-207ENST00000454398 COX6CP09669 75 aa3.15□□□□□ -1.91
HLA-DPA3-207ENST00000454398 SPRR1BP22528 89 aa3.15□□□□□ -1.91
HLA-DPA3-207ENST00000454398 C1orf195Q5TG92 126 aa3.15□□□□□ -1.91
HLA-DPA3-207ENST00000454398 CLEC2BQ92478 149 aa3.15□□□□□ -1.91
HLA-DPA3-207ENST00000454398 FAM236AA0A1B0GUQ0 79 aa3.14□□□□□ -1.91
HLA-DPA3-207ENST00000454398 FAM236BA0A1B0GV22 79 aa3.14□□□□□ -1.91
HLA-DPA3-207ENST00000454398 C6orf99Q4VX62 202 aa3.14□□□□□ -1.91
HLA-DPA3-207ENST00000454398 LITAFQ99732 161 aa3.14□□□□□ -1.91
HLA-DPA3-207ENST00000454398 LAMTOR3Q9UHA4 124 aa3.14□□□□□ -1.91
HLA-DPA3-207ENST00000454398 COX7BP24311 80 aa3.13□□□□□ -1.91
HLA-DPA3-207ENST00000454398 ELOF1P60002 83 aaKnown RBP3.13□□□□□ -1.91
HLA-DPA3-207ENST00000454398 SMIM29Q86T20 159 aa3.13□□□□□ -1.91
HLA-DPA3-207ENST00000454398 LINC00308Q8TCZ7 52 aa3.13□□□□□ -1.91
HLA-DPA3-207ENST00000454398 SPANXDQ9BXN6 97 aa3.13□□□□□ -1.91
HLA-DPA3-207ENST00000454398 KRTAP9-8Q9BYQ0 159 aa3.13□□□□□ -1.91
HLA-DPA3-207ENST00000454398 SPANXCQ9NY87 97 aa3.13□□□□□ -1.91
HLA-DPA3-207ENST00000454398 LST1O00453 97 aa3.12□□□□□ -1.91
HLA-DPA3-207ENST00000454398 DHRS4-AS1Q9P1J3 65 aa3.12□□□□□ -1.91
HLA-DPA3-207ENST00000454398 TRBV7-7A0A0K0K1E9 115 aa3.11□□□□□ -1.91
HLA-DPA3-207ENST00000454398 FAM240AA0A1B0GVK7 77 aa3.11□□□□□ -1.91
HLA-DPA3-207ENST00000454398 OBSCN-AS1Q96MR7 158 aa3.11□□□□□ -1.91
HLA-DPA3-207ENST00000454398 SYNE2Q8WXH0 6885 aaKnown RBP3.11□□□□□ -1.91
HLA-DPA3-207ENST00000454398 CD164Q04900 197 aa3.1□□□□□ -1.91
HLA-DPA3-207ENST00000454398 J3KT08 172 aa3.09□□□□□ -1.91
HLA-DPA3-207ENST00000454398 LCE2BO14633 110 aa3.09□□□□□ -1.91
HLA-DPA3-207ENST00000454398 ACYP1P07311 99 aa3.09□□□□□ -1.91
HLA-DPA3-207ENST00000454398 LINC00643Q86TS7 51 aa3.09□□□□□ -1.91
HLA-DPA3-207ENST00000454398 IGLV5-48A0A075B6I7 105 aa3.08□□□□□ -1.92
HLA-DPA3-207ENST00000454398 TIMM17BO60830 172 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms