RNA–Protein interactions for RNA: ENST00000453386.6

TRA2B-205, Transcript of transformer 2 beta homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRA2B, Length 2,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-205ENST00000453386 COL6A5A8TX70 2615 aa9.91□□□□□ -0.82
TRA2B-205ENST00000453386 NBEAL1Q6ZS30 2694 aa9.91□□□□□ -0.82
TRA2B-205ENST00000453386 RPL37AP61513 92 aaKnown RBP9.9□□□□□ -0.82
TRA2B-205ENST00000453386 UBE2AP49459 152 aa9.89□□□□□ -0.83
TRA2B-205ENST00000453386 C16orf90A8MZG2 172 aa9.88□□□□□ -0.83
TRA2B-205ENST00000453386 DNAH1Q9P2D7 4330 aa9.87□□□□□ -0.83
TRA2B-205ENST00000453386 MP68P56378 58 aa9.86□□□□□ -0.83
TRA2B-205ENST00000453386 CMYA5Q8N3K9 4069 aa9.86□□□□□ -0.83
TRA2B-205ENST00000453386 SRRM2Q9UQ35 2752 aaKnown RBP9.86□□□□□ -0.83
TRA2B-205ENST00000453386 IGLV8-61A0A075B6I0 122 aa9.84□□□□□ -0.83
TRA2B-205ENST00000453386 LINC00208Q96KT6 92 aa9.84□□□□□ -0.83
TRA2B-205ENST00000453386 KRTAP1-5Q9BYS1 174 aa9.84□□□□□ -0.83
TRA2B-205ENST00000453386 NDUFB1O75438 58 aa9.82□□□□□ -0.84
TRA2B-205ENST00000453386 CHTF8P0CG12 524 aa9.82□□□□□ -0.84
TRA2B-205ENST00000453386 PHF5AQ7RTV0 110 aaKnown RBP9.82□□□□□ -0.84
TRA2B-205ENST00000453386 DNAH10Q8IVF4 4471 aa9.81□□□□□ -0.84
TRA2B-205ENST00000453386 KRTAP11-1Q8IUC1 163 aa9.81□□□□□ -0.84
TRA2B-205ENST00000453386 CNBPP62633 177 aaKnown RBP9.8□□□□□ -0.84
TRA2B-205ENST00000453386 PSPHP1O15172 72 aa9.8□□□□□ -0.84
TRA2B-205ENST00000453386 CASC2Q6XLA1 102 aa9.8□□□□□ -0.84
TRA2B-205ENST00000453386 CYP4F30PQ9H0H9 118 aa9.8□□□□□ -0.84
TRA2B-205ENST00000453386 Q1T7F1 81 aa9.79□□□□□ -0.84
TRA2B-205ENST00000453386 TRAV22A0A0B4J277 110 aa9.78□□□□□ -0.84
TRA2B-205ENST00000453386 DNAH3Q8TD57 4116 aa9.78□□□□□ -0.84
TRA2B-205ENST00000453386 KRTAP29-1A8MX34 341 aaPredicted RBP9.78□□□□□ -0.84
TRA2B-205ENST00000453386 K7EIL1 84 aa9.77□□□□□ -0.85
TRA2B-205ENST00000453386 PRR15Q8IV56 129 aa9.77□□□□□ -0.85
TRA2B-205ENST00000453386 H0Y9P7 68 aa9.77□□□□□ -0.85
TRA2B-205ENST00000453386 UBE2DNLQ8IWF7 75 aa9.77□□□□□ -0.85
TRA2B-205ENST00000453386 CSMD3Q7Z407 3707 aa9.76□□□□□ -0.85
TRA2B-205ENST00000453386 C1orf195Q5TG92 126 aa9.75□□□□□ -0.85
TRA2B-205ENST00000453386 LYSTQ99698 3801 aa9.75□□□□□ -0.85
TRA2B-205ENST00000453386 HUWE1Q7Z6Z7 4374 aaKnown RBP9.75□□□□□ -0.85
TRA2B-205ENST00000453386 STAB2Q8WWQ8 2551 aa9.75□□□□□ -0.85
TRA2B-205ENST00000453386 B9D2Q9BPU9 175 aa9.75□□□□□ -0.85
TRA2B-205ENST00000453386 A8MWP4 228 aa9.74□□□□□ -0.85
TRA2B-205ENST00000453386 H0Y9J4 135 aa9.74□□□□□ -0.85
TRA2B-205ENST00000453386 LINC00472Q9H8W2 130 aa9.73□□□□□ -0.85
TRA2B-205ENST00000453386 MGAM2Q2M2H8 2515 aa9.73□□□□□ -0.85
TRA2B-205ENST00000453386 SPRR1BP22528 89 aa9.72□□□□□ -0.85
TRA2B-205ENST00000453386 C14orf177Q52M58 125 aa9.71□□□□□ -0.86
TRA2B-205ENST00000453386 TENM2Q9NT68 2774 aa9.68□□□□□ -0.86
TRA2B-205ENST00000453386 A8MUN3 132 aa9.68□□□□□ -0.86
TRA2B-205ENST00000453386 DNAH9Q9NYC9 4486 aa9.67□□□□□ -0.86
TRA2B-205ENST00000453386 H3BPC8 53 aa9.67□□□□□ -0.86
TRA2B-205ENST00000453386 C9orf163Q8N9P6 203 aa9.66□□□□□ -0.86
TRA2B-205ENST00000453386 SPANXA2-OT1Q8N9U9 137 aa9.66□□□□□ -0.86
TRA2B-205ENST00000453386 IGLV9-49A0A0B4J1Y8 123 aa9.64□□□□□ -0.87
TRA2B-205ENST00000453386 V9GYY9 64 aa9.64□□□□□ -0.87
TRA2B-205ENST00000453386 PANO1I0J062 215 aa9.63□□□□□ -0.87
TRA2B-205ENST00000453386 MMP24-AS1A0A0U1RRL7 71 aa9.63□□□□□ -0.87
TRA2B-205ENST00000453386 APLNQ9ULZ1 77 aa9.63□□□□□ -0.87
TRA2B-205ENST00000453386 COL7A1Q02388 2944 aa9.62□□□□□ -0.87
TRA2B-205ENST00000453386 PCOTHQ58A44 107 aa9.58□□□□□ -0.88
TRA2B-205ENST00000453386 Q8N9P0 234 aaPredicted RBP9.57□□□□□ -0.88
TRA2B-205ENST00000453386 Q5VV11 94 aa9.57□□□□□ -0.88
TRA2B-205ENST00000453386 KRTAP13-1Q8IUC0 172 aa9.57□□□□□ -0.88
TRA2B-205ENST00000453386 CHKB-CPT1BH3BT56 60 aa9.55□□□□□ -0.88
TRA2B-205ENST00000453386 PRR15LQ9BU68 103 aa9.55□□□□□ -0.88
TRA2B-205ENST00000453386 NBDYA0A0U1RRE5 68 aa9.54□□□□□ -0.88
TRA2B-205ENST00000453386 LIMD2Q9BT23 127 aa9.54□□□□□ -0.88
TRA2B-205ENST00000453386 NDUFS5O43920 106 aa9.54□□□□□ -0.88
TRA2B-205ENST00000453386 A8MU10 97 aa9.54□□□□□ -0.88
TRA2B-205ENST00000453386 COA5Q86WW8 74 aa9.54□□□□□ -0.88
TRA2B-205ENST00000453386 Q96NJ1 140 aa9.54□□□□□ -0.88
TRA2B-205ENST00000453386 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.54□□□□□ -0.88
TRA2B-205ENST00000453386 IGHV6-1A0A0B4J1U7 121 aa9.53□□□□□ -0.88
TRA2B-205ENST00000453386 DNAH7Q8WXX0 4024 aa9.53□□□□□ -0.88
TRA2B-205ENST00000453386 IGLV7-46A0A075B6I9 117 aa9.52□□□□□ -0.88
TRA2B-205ENST00000453386 C8orf17Q9NRJ1 99 aa9.51□□□□□ -0.89
TRA2B-205ENST00000453386 PMAIP1Q13794 54 aa9.51□□□□□ -0.89
TRA2B-205ENST00000453386 TP53AIP1Q9HCN2 124 aa9.51□□□□□ -0.89
TRA2B-205ENST00000453386 SEC61GP60059 68 aa9.5□□□□□ -0.89
TRA2B-205ENST00000453386 MOBPQ13875 183 aa9.5□□□□□ -0.89
TRA2B-205ENST00000453386 MDFIQ99750 246 aa9.5□□□□□ -0.89
TRA2B-205ENST00000453386 CDK2AP2O75956 126 aa9.49□□□□□ -0.89
TRA2B-205ENST00000453386 CD164Q04900 197 aa9.49□□□□□ -0.89
TRA2B-205ENST00000453386 SPACA4Q8TDM5 124 aa9.48□□□□□ -0.89
TRA2B-205ENST00000453386 Q6ZRN7 208 aaPredicted RBP9.48□□□□□ -0.89
TRA2B-205ENST00000453386 ANAPC11Q9NYG5 84 aa9.48□□□□□ -0.89
TRA2B-205ENST00000453386 ASB16-AS1Q495Z4 193 aa9.47□□□□□ -0.89
TRA2B-205ENST00000453386 A0A1B0GVX0 72 aa9.46□□□□□ -0.9
TRA2B-205ENST00000453386 PLECQ15149 4684 aaKnown RBP9.45□□□□□ -0.9
TRA2B-205ENST00000453386 LINC00483Q53H64 154 aa9.45□□□□□ -0.9
TRA2B-205ENST00000453386 Q6ZR54 194 aa9.43□□□□□ -0.9
TRA2B-205ENST00000453386 ZNF706Q9Y5V0 76 aaPredicted RBP9.43□□□□□ -0.9
TRA2B-205ENST00000453386 WWC2-AS2Q96NR7 200 aa9.43□□□□□ -0.9
TRA2B-205ENST00000453386 PSORS1C2Q9UIG4 136 aa9.42□□□□□ -0.9
TRA2B-205ENST00000453386 A6NED7 52 aa9.42□□□□□ -0.9
TRA2B-205ENST00000453386 A0A087X002 238 aa9.42□□□□□ -0.9
TRA2B-205ENST00000453386 SPAG11AQ6PDA7 123 aa9.42□□□□□ -0.9
TRA2B-205ENST00000453386 NOTCH2NLQ7Z3S9 236 aa9.42□□□□□ -0.9
TRA2B-205ENST00000453386 MRPL34Q9BQ48 92 aaKnown RBP9.41□□□□□ -0.9
TRA2B-205ENST00000453386 SPTSSBQ8NFR3 76 aa9.41□□□□□ -0.9
TRA2B-205ENST00000453386 NUPR2A6NF83 97 aa9.39□□□□□ -0.91
TRA2B-205ENST00000453386 Q75L30 129 aa9.39□□□□□ -0.91
TRA2B-205ENST00000453386 SPINK6Q6UWN8 80 aa9.39□□□□□ -0.91
TRA2B-205ENST00000453386 A0A087WTM6 91 aa9.38□□□□□ -0.91
TRA2B-205ENST00000453386 IGLV5-52A0A0A0MRZ9 124 aa9.38□□□□□ -0.91
TRA2B-205ENST00000453386 LOC101927531A0A1B0GV80 90 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms