RNA–Protein interactions for RNA: ENST00000452140.5

VPS8-211, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 392 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-211ENST00000452140 LINC01558Q9Y6Z2 57 aa1.28□□□□□ -2.2
VPS8-211ENST00000452140 U3KQA8 63 aa1.28□□□□□ -2.2
VPS8-211ENST00000452140 C2CD3Q4AC94 2353 aa1.28□□□□□ -2.2
VPS8-211ENST00000452140 CEP290O15078 2479 aa1.28□□□□□ -2.2
VPS8-211ENST00000452140 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.27□□□□□ -2.21
VPS8-211ENST00000452140 ETDCA0A1B0GVM5 59 aa1.27□□□□□ -2.21
VPS8-211ENST00000452140 NDUFA4O00483 81 aa1.27□□□□□ -2.21
VPS8-211ENST00000452140 KRTAP21-3Q3LHN1 58 aa1.27□□□□□ -2.21
VPS8-211ENST00000452140 LINC00208Q96KT6 92 aa1.27□□□□□ -2.21
VPS8-211ENST00000452140 PRO3102Q9H379 93 aa1.27□□□□□ -2.21
VPS8-211ENST00000452140 TOMM7Q9P0U1 55 aa1.27□□□□□ -2.21
VPS8-211ENST00000452140 KAAG1Q9UBP8 84 aa1.27□□□□□ -2.21
VPS8-211ENST00000452140 CDH23Q9H251 3354 aa1.27□□□□□ -2.21
VPS8-211ENST00000452140 TNRC18O15417 2968 aaPredicted RBP1.27□□□□□ -2.21
VPS8-211ENST00000452140 DSPP15924 2871 aaKnown RBP1.27□□□□□ -2.21
VPS8-211ENST00000452140 MAP1BP46821 2468 aaKnown RBP1.27□□□□□ -2.21
VPS8-211ENST00000452140 GVINP1Q7Z2Y8 2422 aa1.27□□□□□ -2.21
VPS8-211ENST00000452140 SMG1Q96Q15 3661 aaKnown RBP1.27□□□□□ -2.21
VPS8-211ENST00000452140 ZFHX4Q86UP3 3567 aa1.27□□□□□ -2.21
VPS8-211ENST00000452140 WDFY4Q6ZS81 3184 aa1.26□□□□□ -2.21
VPS8-211ENST00000452140 REV3LO60673 3130 aa1.26□□□□□ -2.21
VPS8-211ENST00000452140 G3V318 75 aa1.26□□□□□ -2.21
VPS8-211ENST00000452140 KALRNO60229 2985 aa1.26□□□□□ -2.21
VPS8-211ENST00000452140 ELOF1P60002 83 aaKnown RBP1.26□□□□□ -2.21
VPS8-211ENST00000452140 KLK9Q2XQG4 91 aa1.26□□□□□ -2.21
VPS8-211ENST00000452140 Q6ZQY7 126 aa1.26□□□□□ -2.21
VPS8-211ENST00000452140 ABCA2Q9BZC7 2435 aa1.26□□□□□ -2.21
VPS8-211ENST00000452140 CACNA1HO95180 2353 aa1.26□□□□□ -2.21
VPS8-211ENST00000452140 DCHS1Q96JQ0 3298 aa1.25□□□□□ -2.21
VPS8-211ENST00000452140 SPTA1P02549 2419 aa1.25□□□□□ -2.21
VPS8-211ENST00000452140 CHD9Q3L8U1 2897 aa1.25□□□□□ -2.21
VPS8-211ENST00000452140 IGKV3OR2-268A0A0C4DH90 116 aa1.25□□□□□ -2.21
VPS8-211ENST00000452140 NBDYA0A0U1RRE5 68 aa1.25□□□□□ -2.21
VPS8-211ENST00000452140 LYNX1G3V0Z9 82 aa1.25□□□□□ -2.21
VPS8-211ENST00000452140 LYNX1P0DP58 116 aa1.25□□□□□ -2.21
VPS8-211ENST00000452140 COX7BP24311 80 aa1.25□□□□□ -2.21
VPS8-211ENST00000452140 SPINK13Q1W4C9 94 aa1.25□□□□□ -2.21
VPS8-211ENST00000452140 DEFB114Q30KQ6 69 aa1.25□□□□□ -2.21
VPS8-211ENST00000452140 KCNQ1DNQ9H478 68 aa1.25□□□□□ -2.21
VPS8-211ENST00000452140 TRANK1O15050 2925 aa1.25□□□□□ -2.21
VPS8-211ENST00000452140 MUC6Q6W4X9 2439 aa1.25□□□□□ -2.21
VPS8-211ENST00000452140 MYO15AQ9UKN7 3530 aa1.24□□□□□ -2.21
VPS8-211ENST00000452140 K7EQZ3 153 aa1.24□□□□□ -2.21
VPS8-211ENST00000452140 MINOS1Q5TGZ0 78 aa1.24□□□□□ -2.21
VPS8-211ENST00000452140 SPAG11AQ6PDA7 123 aa1.24□□□□□ -2.21
VPS8-211ENST00000452140 C5orf56Q8N8D9 126 aa1.24□□□□□ -2.21
VPS8-211ENST00000452140 SPG11Q96JI7 2443 aa1.24□□□□□ -2.21
VPS8-211ENST00000452140 H0Y9P7 68 aa1.23□□□□□ -2.21
VPS8-211ENST00000452140 SPAG11BQ08648 103 aa1.23□□□□□ -2.21
VPS8-211ENST00000452140 DEFB112Q30KQ8 113 aa1.23□□□□□ -2.21
VPS8-211ENST00000452140 UNQ6190/PRO20217Q6UXQ8 127 aa1.23□□□□□ -2.21
VPS8-211ENST00000452140 WFDC13Q8IUB5 93 aa1.23□□□□□ -2.21
VPS8-211ENST00000452140 RHPN1-AS1Q9BWJ2 59 aa1.23□□□□□ -2.21
VPS8-211ENST00000452140 CHD6Q8TD26 2715 aa1.23□□□□□ -2.21
VPS8-211ENST00000452140 EP300Q09472 2414 aaPredicted RBP1.23□□□□□ -2.21
VPS8-211ENST00000452140 OTOGLQ3ZCN5 2332 aa1.22□□□□□ -2.21
VPS8-211ENST00000452140 DMXL2Q8TDJ6 3036 aa1.22□□□□□ -2.21
VPS8-211ENST00000452140 ITPR1Q14643 2758 aa1.22□□□□□ -2.21
VPS8-211ENST00000452140 PIEZO2Q9H5I5 2752 aa1.22□□□□□ -2.21
VPS8-211ENST00000452140 HTN1P15515 57 aa1.22□□□□□ -2.21
VPS8-211ENST00000452140 CELSR3Q9NYQ7 3312 aa1.22□□□□□ -2.21
VPS8-211ENST00000452140 LAMA5O15230 3695 aa1.22□□□□□ -2.21
VPS8-211ENST00000452140 SPTAN1Q13813 2472 aaKnown RBP1.22□□□□□ -2.21
VPS8-211ENST00000452140 PRRC2CQ9Y520 2896 aaKnown RBP1.22□□□□□ -2.21
VPS8-211ENST00000452140 SPTBN4Q9H254 2564 aa1.21□□□□□ -2.22
VPS8-211ENST00000452140 HMCN1Q96RW7 5635 aa1.21□□□□□ -2.22
VPS8-211ENST00000452140 TACC2O95359 2948 aa1.21□□□□□ -2.22
VPS8-211ENST00000452140 RIF1Q5UIP0 2472 aaKnown RBP1.21□□□□□ -2.22
VPS8-211ENST00000452140 NDUFB1O75438 58 aa1.21□□□□□ -2.22
VPS8-211ENST00000452140 SPATA8Q6RVD6 105 aa1.21□□□□□ -2.22
VPS8-211ENST00000452140 CLPSL2Q6UWE3 100 aa1.21□□□□□ -2.22
VPS8-211ENST00000452140 Q8IZM0 81 aa1.21□□□□□ -2.22
VPS8-211ENST00000452140 CCL19Q99731 98 aa1.21□□□□□ -2.22
VPS8-211ENST00000452140 DNAH1Q9P2D7 4330 aa1.21□□□□□ -2.22
VPS8-211ENST00000452140 UBR5O95071 2799 aaPredicted RBP1.21□□□□□ -2.22
VPS8-211ENST00000452140 DCHS2Q6V1P9 2916 aa1.21□□□□□ -2.22
VPS8-211ENST00000452140 NBPF19A0A087WUL8 3843 aa1.21□□□□□ -2.22
VPS8-211ENST00000452140 FCGBPQ9Y6R7 5405 aaPredicted RBP1.21□□□□□ -2.22
VPS8-211ENST00000452140 AKAP13Q12802 2813 aa1.2□□□□□ -2.22
VPS8-211ENST00000452140 DEFB132Q7Z7B7 95 aa1.2□□□□□ -2.22
VPS8-211ENST00000452140 WFDC10BQ8IUB3 73 aa1.2□□□□□ -2.22
VPS8-211ENST00000452140 OTOGQ6ZRI0 2925 aa1.2□□□□□ -2.22
VPS8-211ENST00000452140 BOD1L1Q8NFC6 3051 aa1.2□□□□□ -2.22
VPS8-211ENST00000452140 F8P00451 2351 aa1.2□□□□□ -2.22
VPS8-211ENST00000452140 NCOR2Q9Y618 2525 aa1.2□□□□□ -2.22
VPS8-211ENST00000452140 PTPN13Q12923 2485 aa1.2□□□□□ -2.22
VPS8-211ENST00000452140 DMXL1Q9Y485 3027 aa1.19□□□□□ -2.22
VPS8-211ENST00000452140 NBASA2RRP1 2371 aa1.19□□□□□ -2.22
VPS8-211ENST00000452140 FLG2Q5D862 2391 aaPredicted RBP1.19□□□□□ -2.22
VPS8-211ENST00000452140 IGLV5-48A0A075B6I7 105 aa1.19□□□□□ -2.22
VPS8-211ENST00000452140 A0A087WTM6 91 aa1.19□□□□□ -2.22
VPS8-211ENST00000452140 TRGV1A0A0A0MS02 117 aa1.19□□□□□ -2.22
VPS8-211ENST00000452140 LOC400499M0QZD8 3231 aa1.19□□□□□ -2.22
VPS8-211ENST00000452140 ANGP03950 147 aaKnown RBP1.19□□□□□ -2.22
VPS8-211ENST00000452140 DEFB131AP59861 70 aa1.19□□□□□ -2.22
VPS8-211ENST00000452140 DEFB136Q30KP8 78 aa1.19□□□□□ -2.22
VPS8-211ENST00000452140 CSPG4Q6UVK1 2322 aa1.19□□□□□ -2.22
VPS8-211ENST00000452140 C10orf99Q6UWK7 81 aa1.19□□□□□ -2.22
VPS8-211ENST00000452140 DEFB105AQ8NG35 78 aa1.19□□□□□ -2.22
VPS8-211ENST00000452140 SPRR4Q96PI1 79 aa1.19□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms