RNA–Protein interactions for RNA: ENST00000451349.1

SSXP4-201, Transcript of SSX family pseudogene 4, humanhuman

BASIC

Gene SSXP4, Length 245 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSXP4-201ENST00000451349 ZDBF2Q9HCK1 2354 aa1.15□□□□□ -2.23
SSXP4-201ENST00000451349 PRCDQ00LT1 54 aa1.14□□□□□ -2.23
SSXP4-201ENST00000451349 COL6A6A6NMZ7 2263 aa1.13□□□□□ -2.23
SSXP4-201ENST00000451349 M0QY20 66 aa1.13□□□□□ -2.23
SSXP4-201ENST00000451349 PIEZO2Q9H5I5 2752 aa1.13□□□□□ -2.23
SSXP4-201ENST00000451349 PTPRQQ9UMZ3 2332 aa1.12□□□□□ -2.23
SSXP4-201ENST00000451349 RP1L1Q8IWN7 2480 aaPredicted RBP1.12□□□□□ -2.23
SSXP4-201ENST00000451349 H3BSH0 61 aa1.12□□□□□ -2.23
SSXP4-201ENST00000451349 CLPSL2Q6UWE3 100 aa1.12□□□□□ -2.23
SSXP4-201ENST00000451349 TOMM7Q9P0U1 55 aa1.11□□□□□ -2.23
SSXP4-201ENST00000451349 ASH1LQ9NR48 2969 aaKnown RBP1.1□□□□□ -2.23
SSXP4-201ENST00000451349 A8MTW9 85 aa1.1□□□□□ -2.23
SSXP4-201ENST00000451349 KRTAP4-1Q9BYQ7 146 aa1.1□□□□□ -2.23
SSXP4-201ENST00000451349 PTPRZ1P23471 2315 aaPredicted RBP1.1□□□□□ -2.23
SSXP4-201ENST00000451349 SPINK1P00995 79 aa1.09□□□□□ -2.23
SSXP4-201ENST00000451349 USF3Q68DE3 2245 aa1.09□□□□□ -2.24
SSXP4-201ENST00000451349 DOPEY2Q9Y3R5 2298 aa1.09□□□□□ -2.24
SSXP4-201ENST00000451349 WNK2Q9Y3S1 2297 aa1.08□□□□□ -2.24
SSXP4-201ENST00000451349 H0YGG7 62 aa1.08□□□□□ -2.24
SSXP4-201ENST00000451349 ROS1P08922 2347 aa1.06□□□□□ -2.24
SSXP4-201ENST00000451349 K7EIM0 57 aa1.04□□□□□ -2.24
SSXP4-201ENST00000451349 DEFB135Q30KP9 77 aa1.04□□□□□ -2.24
SSXP4-201ENST00000451349 M0QZ58 72 aa1.03□□□□□ -2.24
SSXP4-201ENST00000451349 SPINK6Q6UWN8 80 aa1.03□□□□□ -2.24
SSXP4-201ENST00000451349 ZNF462Q96JM2 2506 aa1.02□□□□□ -2.25
SSXP4-201ENST00000451349 PLCE1Q9P212 2302 aa1.02□□□□□ -2.25
SSXP4-201ENST00000451349 MEGF8Q7Z7M0 2845 aa1.01□□□□□ -2.25
SSXP4-201ENST00000451349 TMEM167AQ8TBQ9 72 aa1.01□□□□□ -2.25
SSXP4-201ENST00000451349 PCNX1Q96RV3 2341 aa1.01□□□□□ -2.25
SSXP4-201ENST00000451349 M0R2T5 61 aa1□□□□□ -2.25
SSXP4-201ENST00000451349 DEFB104AQ8WTQ1 72 aa0.99□□□□□ -2.25
SSXP4-201ENST00000451349 REV3LO60673 3130 aa0.99□□□□□ -2.25
SSXP4-201ENST00000451349 C2CD3Q4AC94 2353 aa0.98□□□□□ -2.25
SSXP4-201ENST00000451349 PKDREJQ9NTG1 2253 aa0.98□□□□□ -2.25
SSXP4-201ENST00000451349 SMR3AQ99954 134 aa0.96□□□□□ -2.26
SSXP4-201ENST00000451349 TPRP12270 2363 aaKnown RBP0.95□□□□□ -2.26
SSXP4-201ENST00000451349 C9orf92A6NGG3 77 aa0.95□□□□□ -2.26
SSXP4-201ENST00000451349 FCGBPQ9Y6R7 5405 aaPredicted RBP0.95□□□□□ -2.26
SSXP4-201ENST00000451349 A0A0C4DFX4 3053 aa0.95□□□□□ -2.26
SSXP4-201ENST00000451349 CSMD3Q7Z407 3707 aa0.94□□□□□ -2.26
SSXP4-201ENST00000451349 MUC6Q6W4X9 2439 aa0.94□□□□□ -2.26
SSXP4-201ENST00000451349 SPTBN2O15020 2390 aa0.93□□□□□ -2.26
SSXP4-201ENST00000451349 TNP1P09430 55 aa0.93□□□□□ -2.26
SSXP4-201ENST00000451349 U3KQA8 63 aa0.93□□□□□ -2.26
SSXP4-201ENST00000451349 TTC28Q96AY4 2481 aa0.92□□□□□ -2.26
SSXP4-201ENST00000451349 PDE4DIPQ5VU43 2346 aa0.92□□□□□ -2.26
SSXP4-201ENST00000451349 RPL39P5Q59GN2 51 aa0.92□□□□□ -2.26
SSXP4-201ENST00000451349 KNL1Q8NG31 2342 aa0.92□□□□□ -2.26
SSXP4-201ENST00000451349 DSPP15924 2871 aaKnown RBP0.91□□□□□ -2.26
SSXP4-201ENST00000451349 IGF2RP11717 2491 aa0.91□□□□□ -2.26
SSXP4-201ENST00000451349 ANK2Q01484 3957 aa0.91□□□□□ -2.26
SSXP4-201ENST00000451349 CACNA1HO95180 2353 aa0.91□□□□□ -2.26
SSXP4-201ENST00000451349 CELSR1Q9NYQ6 3014 aa0.91□□□□□ -2.26
SSXP4-201ENST00000451349 BSNQ9UPA5 3926 aa0.9□□□□□ -2.26
SSXP4-201ENST00000451349 KRTAP2-3P0C7H8 128 aa0.9□□□□□ -2.27
SSXP4-201ENST00000451349 KRTAP2-4Q9BYR9 128 aa0.9□□□□□ -2.27
SSXP4-201ENST00000451349 KRTAP2-1Q9BYU5 128 aa0.9□□□□□ -2.27
SSXP4-201ENST00000451349 CELSR2Q9HCU4 2923 aa0.89□□□□□ -2.27
SSXP4-201ENST00000451349 ABCA2Q9BZC7 2435 aa0.89□□□□□ -2.27
SSXP4-201ENST00000451349 TENM4Q6N022 2769 aa0.89□□□□□ -2.27
SSXP4-201ENST00000451349 SPTBN1Q01082 2364 aaKnown RBP0.89□□□□□ -2.27
SSXP4-201ENST00000451349 TRANK1O15050 2925 aa0.88□□□□□ -2.27
SSXP4-201ENST00000451349 DEFB108AA8MXU0 73 aa0.88□□□□□ -2.27
SSXP4-201ENST00000451349 SPART-AS1P0CW21 52 aa0.88□□□□□ -2.27
SSXP4-201ENST00000451349 MYCBP2O75592 4640 aa0.88□□□□□ -2.27
SSXP4-201ENST00000451349 CHD9Q3L8U1 2897 aa0.87□□□□□ -2.27
SSXP4-201ENST00000451349 FBN3Q75N90 2809 aa0.87□□□□□ -2.27
SSXP4-201ENST00000451349 ZNF292O60281 2723 aa0.87□□□□□ -2.27
SSXP4-201ENST00000451349 H3BNG1 76 aa0.87□□□□□ -2.27
SSXP4-201ENST00000451349 CSPG4Q6UVK1 2322 aa0.87□□□□□ -2.27
SSXP4-201ENST00000451349 H3BUX3 64 aa0.86□□□□□ -2.27
SSXP4-201ENST00000451349 PRRC2CQ9Y520 2896 aaKnown RBP0.85□□□□□ -2.27
SSXP4-201ENST00000451349 LYSTQ99698 3801 aa0.85□□□□□ -2.27
SSXP4-201ENST00000451349 F8P00451 2351 aa0.84□□□□□ -2.27
SSXP4-201ENST00000451349 PRKDCP78527 4128 aaKnown RBP0.84□□□□□ -2.27
SSXP4-201ENST00000451349 KRTAP19-3Q7Z4W3 81 aa0.84□□□□□ -2.27
SSXP4-201ENST00000451349 VPS13BQ7Z7G8 4022 aa0.84□□□□□ -2.28
SSXP4-201ENST00000451349 SACSQ9NZJ4 4579 aa0.84□□□□□ -2.28
SSXP4-201ENST00000451349 FAT2Q9NYQ8 4349 aa0.83□□□□□ -2.28
SSXP4-201ENST00000451349 DNAH11Q96DT5 4516 aa0.83□□□□□ -2.28
SSXP4-201ENST00000451349 PRM1P04553 51 aa0.83□□□□□ -2.28
SSXP4-201ENST00000451349 DEFB110Q30KQ9 67 aa0.83□□□□□ -2.28
SSXP4-201ENST00000451349 FRAS1Q86XX4 4008 aa0.82□□□□□ -2.28
SSXP4-201ENST00000451349 ZNF469Q96JG9 3925 aaPredicted RBP0.82□□□□□ -2.28
SSXP4-201ENST00000451349 KMT2AQ03164 3969 aa0.82□□□□□ -2.28
SSXP4-201ENST00000451349 RHPN1-AS1Q9BWJ2 59 aa0.82□□□□□ -2.28
SSXP4-201ENST00000451349 VPS13DQ5THJ4 4388 aa0.82□□□□□ -2.28
SSXP4-201ENST00000451349 POLQO75417 2590 aa0.82□□□□□ -2.28
SSXP4-201ENST00000451349 ABCA12Q86UK0 2595 aa0.81□□□□□ -2.28
SSXP4-201ENST00000451349 NBPF19A0A087WUL8 3843 aa0.8□□□□□ -2.28
SSXP4-201ENST00000451349 EP300Q09472 2414 aaPredicted RBP0.8□□□□□ -2.28
SSXP4-201ENST00000451349 VWFP04275 2813 aa0.8□□□□□ -2.28
SSXP4-201ENST00000451349 TENM1Q9UKZ4 2725 aa0.8□□□□□ -2.28
SSXP4-201ENST00000451349 GVINP1Q7Z2Y8 2422 aa0.78□□□□□ -2.28
SSXP4-201ENST00000451349 AKAP13Q12802 2813 aa0.78□□□□□ -2.28
SSXP4-201ENST00000451349 FBN2P35556 2912 aa0.78□□□□□ -2.29
SSXP4-201ENST00000451349 HELZ2Q9BYK8 2649 aaKnown RBP0.77□□□□□ -2.29
SSXP4-201ENST00000451349 SPENQ96T58 3664 aaKnown RBP0.77□□□□□ -2.29
SSXP4-201ENST00000451349 TNXBP22105 4242 aa0.77□□□□□ -2.29
SSXP4-201ENST00000451349 CHD7Q9P2D1 2997 aa0.77□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms