RNA–Protein interactions for RNA: ENST00000451349.1

SSXP4-201, Transcript of SSX family pseudogene 4, humanhuman

BASIC

Gene SSXP4, Length 245 nt, Biotype unprocessed pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSXP4-201ENST00000451349 ZDBF2Q9HCK1 2354 aa1.15□□□□□ -2.23
SSXP4-201ENST00000451349 PRCDQ00LT1 54 aa1.14□□□□□ -2.23
SSXP4-201ENST00000451349 COL6A6A6NMZ7 2263 aa1.13□□□□□ -2.23
SSXP4-201ENST00000451349 M0QY20 66 aa1.13□□□□□ -2.23
SSXP4-201ENST00000451349 PIEZO2Q9H5I5 2752 aa1.13□□□□□ -2.23
SSXP4-201ENST00000451349 PTPRQQ9UMZ3 2332 aa1.12□□□□□ -2.23
SSXP4-201ENST00000451349 RP1L1Q8IWN7 2480 aaPredicted RBP1.12□□□□□ -2.23
SSXP4-201ENST00000451349 H3BSH0 61 aa1.12□□□□□ -2.23
SSXP4-201ENST00000451349 CLPSL2Q6UWE3 100 aa1.12□□□□□ -2.23
SSXP4-201ENST00000451349 TOMM7Q9P0U1 55 aa1.11□□□□□ -2.23
SSXP4-201ENST00000451349 ASH1LQ9NR48 2969 aaKnown RBP1.1□□□□□ -2.23
SSXP4-201ENST00000451349 A8MTW9 85 aa1.1□□□□□ -2.23
SSXP4-201ENST00000451349 KRTAP4-1Q9BYQ7 146 aa1.1□□□□□ -2.23
SSXP4-201ENST00000451349 PTPRZ1P23471 2315 aaPredicted RBP1.1□□□□□ -2.23
SSXP4-201ENST00000451349 SPINK1P00995 79 aa1.09□□□□□ -2.23
SSXP4-201ENST00000451349 USF3Q68DE3 2245 aa1.09□□□□□ -2.24
SSXP4-201ENST00000451349 DOPEY2Q9Y3R5 2298 aa1.09□□□□□ -2.24
SSXP4-201ENST00000451349 WNK2Q9Y3S1 2297 aa1.08□□□□□ -2.24
SSXP4-201ENST00000451349 H0YGG7 62 aa1.08□□□□□ -2.24
SSXP4-201ENST00000451349 ROS1P08922 2347 aa1.06□□□□□ -2.24
SSXP4-201ENST00000451349 K7EIM0 57 aa1.04□□□□□ -2.24
SSXP4-201ENST00000451349 DEFB135Q30KP9 77 aa1.04□□□□□ -2.24
SSXP4-201ENST00000451349 M0QZ58 72 aa1.03□□□□□ -2.24
SSXP4-201ENST00000451349 SPINK6Q6UWN8 80 aa1.03□□□□□ -2.24
SSXP4-201ENST00000451349 ZNF462Q96JM2 2506 aa1.02□□□□□ -2.25
SSXP4-201ENST00000451349 PLCE1Q9P212 2302 aa1.02□□□□□ -2.25
SSXP4-201ENST00000451349 MEGF8Q7Z7M0 2845 aa1.01□□□□□ -2.25
SSXP4-201ENST00000451349 TMEM167AQ8TBQ9 72 aa1.01□□□□□ -2.25
SSXP4-201ENST00000451349 PCNX1Q96RV3 2341 aa1.01□□□□□ -2.25
SSXP4-201ENST00000451349 M0R2T5 61 aa1□□□□□ -2.25
SSXP4-201ENST00000451349 DEFB104AQ8WTQ1 72 aa0.99□□□□□ -2.25
SSXP4-201ENST00000451349 REV3LO60673 3130 aa0.99□□□□□ -2.25
SSXP4-201ENST00000451349 C2CD3Q4AC94 2353 aa0.98□□□□□ -2.25
SSXP4-201ENST00000451349 PKDREJQ9NTG1 2253 aa0.98□□□□□ -2.25
SSXP4-201ENST00000451349 SMR3AQ99954 134 aa0.96□□□□□ -2.26
SSXP4-201ENST00000451349 TPRP12270 2363 aaKnown RBP0.95□□□□□ -2.26
SSXP4-201ENST00000451349 C9orf92A6NGG3 77 aa0.95□□□□□ -2.26
SSXP4-201ENST00000451349 FCGBPQ9Y6R7 5405 aaPredicted RBP0.95□□□□□ -2.26
SSXP4-201ENST00000451349 A0A0C4DFX4 3053 aa0.95□□□□□ -2.26
SSXP4-201ENST00000451349 CSMD3Q7Z407 3707 aa0.94□□□□□ -2.26
SSXP4-201ENST00000451349 MUC6Q6W4X9 2439 aa0.94□□□□□ -2.26
SSXP4-201ENST00000451349 SPTBN2O15020 2390 aa0.93□□□□□ -2.26
SSXP4-201ENST00000451349 TNP1P09430 55 aa0.93□□□□□ -2.26
SSXP4-201ENST00000451349 U3KQA8 63 aa0.93□□□□□ -2.26
SSXP4-201ENST00000451349 TTC28Q96AY4 2481 aa0.92□□□□□ -2.26
SSXP4-201ENST00000451349 PDE4DIPQ5VU43 2346 aa0.92□□□□□ -2.26
SSXP4-201ENST00000451349 RPL39P5Q59GN2 51 aa0.92□□□□□ -2.26
SSXP4-201ENST00000451349 KNL1Q8NG31 2342 aa0.92□□□□□ -2.26
SSXP4-201ENST00000451349 DSPP15924 2871 aaKnown RBP0.91□□□□□ -2.26
SSXP4-201ENST00000451349 IGF2RP11717 2491 aa0.91□□□□□ -2.26
SSXP4-201ENST00000451349 ANK2Q01484 3957 aa0.91□□□□□ -2.26
SSXP4-201ENST00000451349 CACNA1HO95180 2353 aa0.91□□□□□ -2.26
SSXP4-201ENST00000451349 CELSR1Q9NYQ6 3014 aa0.91□□□□□ -2.26
SSXP4-201ENST00000451349 BSNQ9UPA5 3926 aa0.9□□□□□ -2.26
SSXP4-201ENST00000451349 KRTAP2-3P0C7H8 128 aa0.9□□□□□ -2.27
SSXP4-201ENST00000451349 KRTAP2-4Q9BYR9 128 aa0.9□□□□□ -2.27
SSXP4-201ENST00000451349 KRTAP2-1Q9BYU5 128 aa0.9□□□□□ -2.27
SSXP4-201ENST00000451349 CELSR2Q9HCU4 2923 aa0.89□□□□□ -2.27
SSXP4-201ENST00000451349 ABCA2Q9BZC7 2435 aa0.89□□□□□ -2.27
SSXP4-201ENST00000451349 TENM4Q6N022 2769 aa0.89□□□□□ -2.27
SSXP4-201ENST00000451349 SPTBN1Q01082 2364 aaKnown RBP0.89□□□□□ -2.27
SSXP4-201ENST00000451349 TRANK1O15050 2925 aa0.88□□□□□ -2.27
SSXP4-201ENST00000451349 DEFB108AA8MXU0 73 aa0.88□□□□□ -2.27
SSXP4-201ENST00000451349 SPART-AS1P0CW21 52 aa0.88□□□□□ -2.27
SSXP4-201ENST00000451349 MYCBP2O75592 4640 aa0.88□□□□□ -2.27
SSXP4-201ENST00000451349 CHD9Q3L8U1 2897 aa0.87□□□□□ -2.27
SSXP4-201ENST00000451349 FBN3Q75N90 2809 aa0.87□□□□□ -2.27
SSXP4-201ENST00000451349 ZNF292O60281 2723 aa0.87□□□□□ -2.27
SSXP4-201ENST00000451349 H3BNG1 76 aa0.87□□□□□ -2.27
SSXP4-201ENST00000451349 CSPG4Q6UVK1 2322 aa0.87□□□□□ -2.27
SSXP4-201ENST00000451349 H3BUX3 64 aa0.86□□□□□ -2.27
SSXP4-201ENST00000451349 PRRC2CQ9Y520 2896 aaKnown RBP0.85□□□□□ -2.27
SSXP4-201ENST00000451349 LYSTQ99698 3801 aa0.85□□□□□ -2.27
SSXP4-201ENST00000451349 F8P00451 2351 aa0.84□□□□□ -2.27
SSXP4-201ENST00000451349 PRKDCP78527 4128 aaKnown RBP0.84□□□□□ -2.27
SSXP4-201ENST00000451349 KRTAP19-3Q7Z4W3 81 aa0.84□□□□□ -2.27
SSXP4-201ENST00000451349 VPS13BQ7Z7G8 4022 aa0.84□□□□□ -2.28
SSXP4-201ENST00000451349 SACSQ9NZJ4 4579 aa0.84□□□□□ -2.28
SSXP4-201ENST00000451349 FAT2Q9NYQ8 4349 aa0.83□□□□□ -2.28
SSXP4-201ENST00000451349 DNAH11Q96DT5 4516 aa0.83□□□□□ -2.28
SSXP4-201ENST00000451349 PRM1P04553 51 aa0.83□□□□□ -2.28
SSXP4-201ENST00000451349 DEFB110Q30KQ9 67 aa0.83□□□□□ -2.28
SSXP4-201ENST00000451349 FRAS1Q86XX4 4008 aa0.82□□□□□ -2.28
SSXP4-201ENST00000451349 ZNF469Q96JG9 3925 aaPredicted RBP0.82□□□□□ -2.28
SSXP4-201ENST00000451349 KMT2AQ03164 3969 aa0.82□□□□□ -2.28
SSXP4-201ENST00000451349 RHPN1-AS1Q9BWJ2 59 aa0.82□□□□□ -2.28
SSXP4-201ENST00000451349 VPS13DQ5THJ4 4388 aa0.82□□□□□ -2.28
SSXP4-201ENST00000451349 POLQO75417 2590 aa0.82□□□□□ -2.28
SSXP4-201ENST00000451349 ABCA12Q86UK0 2595 aa0.81□□□□□ -2.28
SSXP4-201ENST00000451349 NBPF19A0A087WUL8 3843 aa0.8□□□□□ -2.28
SSXP4-201ENST00000451349 EP300Q09472 2414 aaPredicted RBP0.8□□□□□ -2.28
SSXP4-201ENST00000451349 VWFP04275 2813 aa0.8□□□□□ -2.28
SSXP4-201ENST00000451349 TENM1Q9UKZ4 2725 aa0.8□□□□□ -2.28
SSXP4-201ENST00000451349 GVINP1Q7Z2Y8 2422 aa0.78□□□□□ -2.28
SSXP4-201ENST00000451349 AKAP13Q12802 2813 aa0.78□□□□□ -2.28
SSXP4-201ENST00000451349 FBN2P35556 2912 aa0.78□□□□□ -2.29
SSXP4-201ENST00000451349 HELZ2Q9BYK8 2649 aaKnown RBP0.77□□□□□ -2.29
SSXP4-201ENST00000451349 SPENQ96T58 3664 aaKnown RBP0.77□□□□□ -2.29
SSXP4-201ENST00000451349 TNXBP22105 4242 aa0.77□□□□□ -2.29
SSXP4-201ENST00000451349 CHD7Q9P2D1 2997 aa0.77□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms