RNA–Protein interactions for RNA: ENST00000450717.7

SMARCA4-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 5 BASIC

Gene SMARCA4, Length 5,506 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-205ENST00000450717 CAMK2N1Q7Z7J9 78 aa7.99□□□□□ -1.13
SMARCA4-205ENST00000450717 S4R3F8 94 aa7.98□□□□□ -1.13
SMARCA4-205ENST00000450717 ATRQ13535 2644 aa7.97□□□□□ -1.13
SMARCA4-205ENST00000450717 LINC00483Q53H64 154 aa7.97□□□□□ -1.13
SMARCA4-205ENST00000450717 CSAG1Q6PB30 78 aa7.96□□□□□ -1.13
SMARCA4-205ENST00000450717 KRTAP4-16G5E9R7 235 aaPredicted RBP7.94□□□□□ -1.14
SMARCA4-205ENST00000450717 Q5VV11 94 aa7.93□□□□□ -1.14
SMARCA4-205ENST00000450717 PRAC1Q96KF2 57 aa7.93□□□□□ -1.14
SMARCA4-205ENST00000450717 HTTP42858 3142 aa7.92□□□□□ -1.14
SMARCA4-205ENST00000450717 TRANK1O15050 2925 aa7.91□□□□□ -1.14
SMARCA4-205ENST00000450717 OXTP01178 125 aa7.89□□□□□ -1.15
SMARCA4-205ENST00000450717 SPINK7P58062 85 aa7.88□□□□□ -1.15
SMARCA4-205ENST00000450717 SETXQ7Z333 2677 aaKnown RBP7.88□□□□□ -1.15
SMARCA4-205ENST00000450717 PCNTO95613 3336 aa7.88□□□□□ -1.15
SMARCA4-205ENST00000450717 M0R2T5 61 aa7.88□□□□□ -1.15
SMARCA4-205ENST00000450717 CFAP46Q8IYW2 2715 aa7.86□□□□□ -1.15
SMARCA4-205ENST00000450717 Q6ZR54 194 aa7.86□□□□□ -1.15
SMARCA4-205ENST00000450717 KRTAP10-1P60331 282 aa7.85□□□□□ -1.15
SMARCA4-205ENST00000450717 KRTAP29-1A8MX34 341 aaPredicted RBP7.83□□□□□ -1.16
SMARCA4-205ENST00000450717 SEC61BP60468 96 aaKnown RBP7.83□□□□□ -1.16
SMARCA4-205ENST00000450717 KRTAP10-2P60368 255 aa7.82□□□□□ -1.16
SMARCA4-205ENST00000450717 LCE6AA0A183 80 aa7.8□□□□□ -1.16
SMARCA4-205ENST00000450717 PANO1I0J062 215 aa7.79□□□□□ -1.16
SMARCA4-205ENST00000450717 Q5VSD8 79 aa7.79□□□□□ -1.16
SMARCA4-205ENST00000450717 R4GN34 69 aa7.79□□□□□ -1.16
SMARCA4-205ENST00000450717 ZNF292O60281 2723 aa7.79□□□□□ -1.16
SMARCA4-205ENST00000450717 RPL37P61927 97 aaKnown RBP7.74□□□□□ -1.17
SMARCA4-205ENST00000450717 H1FX-AS1Q4G0G2 97 aa7.73□□□□□ -1.17
SMARCA4-205ENST00000450717 MGAQ8IWI9 3026 aa7.73□□□□□ -1.17
SMARCA4-205ENST00000450717 CENPEQ02224 2701 aa7.71□□□□□ -1.17
SMARCA4-205ENST00000450717 ROMO1P60602 79 aa7.71□□□□□ -1.17
SMARCA4-205ENST00000450717 ASB16-AS1Q495Z4 193 aa7.71□□□□□ -1.17
SMARCA4-205ENST00000450717 TEP1Q99973 2627 aaKnown RBP7.69□□□□□ -1.18
SMARCA4-205ENST00000450717 RANBP2P49792 3224 aaKnown RBP7.68□□□□□ -1.18
SMARCA4-205ENST00000450717 CHD6Q8TD26 2715 aa7.67□□□□□ -1.18
SMARCA4-205ENST00000450717 A0A087X002 238 aa7.67□□□□□ -1.18
SMARCA4-205ENST00000450717 BAHCC1Q9P281 2608 aa7.67□□□□□ -1.18
SMARCA4-205ENST00000450717 Q6ZRN7 208 aaPredicted RBP7.66□□□□□ -1.18
SMARCA4-205ENST00000450717 RPS29P62273 56 aaKnown RBP7.65□□□□□ -1.18
SMARCA4-205ENST00000450717 CFAP54Q96N23 3096 aa7.65□□□□□ -1.18
SMARCA4-205ENST00000450717 AKAP13Q12802 2813 aa7.65□□□□□ -1.19
SMARCA4-205ENST00000450717 A0A0A0MQY5 61 aa7.65□□□□□ -1.19
SMARCA4-205ENST00000450717 M0QZ58 72 aa7.65□□□□□ -1.19
SMARCA4-205ENST00000450717 KRTAP11-1Q8IUC1 163 aa7.64□□□□□ -1.19
SMARCA4-205ENST00000450717 KRTAP7-1Q8IUC3 87 aa7.64□□□□□ -1.19
SMARCA4-205ENST00000450717 STAB1Q9NY15 2570 aa7.62□□□□□ -1.19
SMARCA4-205ENST00000450717 GCN1Q92616 2671 aaKnown RBP7.62□□□□□ -1.19
SMARCA4-205ENST00000450717 NOTCH2NLQ7Z3S9 236 aa7.61□□□□□ -1.19
SMARCA4-205ENST00000450717 MKI67P46013 3256 aaKnown RBP7.61□□□□□ -1.19
SMARCA4-205ENST00000450717 A0A0C4DFX4 3053 aa7.61□□□□□ -1.19
SMARCA4-205ENST00000450717 TEX15Q9BXT5 2789 aa7.6□□□□□ -1.19
SMARCA4-205ENST00000450717 ADM2Q7Z4H4 148 aa7.58□□□□□ -1.2
SMARCA4-205ENST00000450717 KRTAP13-1Q8IUC0 172 aa7.58□□□□□ -1.2
SMARCA4-205ENST00000450717 UNC79Q9P2D8 2635 aa7.56□□□□□ -1.2
SMARCA4-205ENST00000450717 SPATA8Q6RVD6 105 aa7.56□□□□□ -1.2
SMARCA4-205ENST00000450717 NBEAL1Q6ZS30 2694 aa7.55□□□□□ -1.2
SMARCA4-205ENST00000450717 LAMA3Q16787 3333 aa7.55□□□□□ -1.2
SMARCA4-205ENST00000450717 IGSF10Q6WRI0 2623 aa7.54□□□□□ -1.2
SMARCA4-205ENST00000450717 PLAC4Q8WY50 150 aa7.52□□□□□ -1.21
SMARCA4-205ENST00000450717 COL6A5A8TX70 2615 aa7.5□□□□□ -1.21
SMARCA4-205ENST00000450717 KRTAP13-2Q52LG2 175 aa7.49□□□□□ -1.21
SMARCA4-205ENST00000450717 WDFY4Q6ZS81 3184 aa7.48□□□□□ -1.21
SMARCA4-205ENST00000450717 A6NN06 94 aa7.47□□□□□ -1.21
SMARCA4-205ENST00000450717 LAMA2P24043 3122 aaKnown RBP7.45□□□□□ -1.22
SMARCA4-205ENST00000450717 DSPP15924 2871 aaKnown RBP7.45□□□□□ -1.22
SMARCA4-205ENST00000450717 NBEAL2Q6ZNJ1 2754 aa7.45□□□□□ -1.22
SMARCA4-205ENST00000450717 TRIOO75962 3097 aa7.43□□□□□ -1.22
SMARCA4-205ENST00000450717 NOTCH1P46531 2555 aa7.43□□□□□ -1.22
SMARCA4-205ENST00000450717 BRCA2P51587 3418 aa7.43□□□□□ -1.22
SMARCA4-205ENST00000450717 FLG2Q5D862 2391 aaPredicted RBP7.39□□□□□ -1.23
SMARCA4-205ENST00000450717 FRYQ5TBA9 3013 aa7.38□□□□□ -1.23
SMARCA4-205ENST00000450717 KRTAP16-1A8MUX0 517 aa7.38□□□□□ -1.23
SMARCA4-205ENST00000450717 KRTAP25-1Q3LHN0 102 aa7.35□□□□□ -1.23
SMARCA4-205ENST00000450717 KMT2BQ9UMN6 2715 aaPredicted RBP7.35□□□□□ -1.23
SMARCA4-205ENST00000450717 PRUNE2Q8WUY3 3088 aa7.35□□□□□ -1.23
SMARCA4-205ENST00000450717 DMBT1Q9UGM3 2413 aaPredicted RBP7.35□□□□□ -1.23
SMARCA4-205ENST00000450717 A8MUU9 505 aa7.35□□□□□ -1.23
SMARCA4-205ENST00000450717 NSD1Q96L73 2696 aaPredicted RBP7.34□□□□□ -1.23
SMARCA4-205ENST00000450717 ITPR2Q14571 2701 aa7.34□□□□□ -1.23
SMARCA4-205ENST00000450717 UBR5O95071 2799 aaPredicted RBP7.34□□□□□ -1.23
SMARCA4-205ENST00000450717 VPS13AQ96RL7 3174 aa7.32□□□□□ -1.24
SMARCA4-205ENST00000450717 A8MU10 97 aa7.32□□□□□ -1.24
SMARCA4-205ENST00000450717 KRTAP21-3Q3LHN1 58 aa7.32□□□□□ -1.24
SMARCA4-205ENST00000450717 UNC80Q8N2C7 3258 aa7.31□□□□□ -1.24
SMARCA4-205ENST00000450717 C20orf166-AS1Q96NR2 134 aa7.27□□□□□ -1.25
SMARCA4-205ENST00000450717 MAP1AP78559 2803 aaPredicted RBP7.27□□□□□ -1.25
SMARCA4-205ENST00000450717 ITPR1Q14643 2758 aa7.27□□□□□ -1.25
SMARCA4-205ENST00000450717 XIRP2A4UGR9 3374 aa7.25□□□□□ -1.25
SMARCA4-205ENST00000450717 CDH23Q9H251 3354 aa7.23□□□□□ -1.25
SMARCA4-205ENST00000450717 STAB2Q8WWQ8 2551 aa7.22□□□□□ -1.25
SMARCA4-205ENST00000450717 KALRNO60229 2985 aa7.2□□□□□ -1.26
SMARCA4-205ENST00000450717 NDUFAF8A1L188 74 aa7.2□□□□□ -1.26
SMARCA4-205ENST00000450717 FLNCQ14315 2725 aa7.16□□□□□ -1.26
SMARCA4-205ENST00000450717 KRTAP1-4P0C5Y4 121 aa7.16□□□□□ -1.26
SMARCA4-205ENST00000450717 ATMQ13315 3056 aa7.15□□□□□ -1.27
SMARCA4-205ENST00000450717 UTP20O75691 2785 aaKnown RBP7.14□□□□□ -1.27
SMARCA4-205ENST00000450717 TNP1P09430 55 aa7.13□□□□□ -1.27
SMARCA4-205ENST00000450717 LRBAP50851 2863 aa7.12□□□□□ -1.27
SMARCA4-205ENST00000450717 CELSR3Q9NYQ7 3312 aa7.12□□□□□ -1.27
SMARCA4-205ENST00000450717 LAMA1P25391 3075 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms