RNA–Protein interactions for RNA: ENST00000449307.3

AC006001.3-201, humanhuman

TSL 3 BASIC

Gene AC006001.3, Length 7,092 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC006001.3-201ENST00000449307 MMP24-AS1A0A0U1RRL7 71 aa7.64□□□□□ -1.19
AC006001.3-201ENST00000449307 MAST4O15021 2626 aa7.63□□□□□ -1.19
AC006001.3-201ENST00000449307 ATRQ13535 2644 aa7.63□□□□□ -1.19
AC006001.3-201ENST00000449307 FP248Q71RG6 208 aaPredicted RBP7.63□□□□□ -1.19
AC006001.3-201ENST00000449307 CFAP46Q8IYW2 2715 aa7.63□□□□□ -1.19
AC006001.3-201ENST00000449307 ADM2Q7Z4H4 148 aa7.6□□□□□ -1.19
AC006001.3-201ENST00000449307 PRRC2CQ9Y520 2896 aaKnown RBP7.6□□□□□ -1.19
AC006001.3-201ENST00000449307 OCR1Q9BZK8 76 aa7.58□□□□□ -1.2
AC006001.3-201ENST00000449307 Q5XG85 94 aa7.57□□□□□ -1.2
AC006001.3-201ENST00000449307 Q8NDZ9 215 aa7.56□□□□□ -1.2
AC006001.3-201ENST00000449307 SPRR1AP35321 89 aa7.55□□□□□ -1.2
AC006001.3-201ENST00000449307 FLG2Q5D862 2391 aaPredicted RBP7.55□□□□□ -1.2
AC006001.3-201ENST00000449307 H1FX-AS1Q4G0G2 97 aa7.54□□□□□ -1.2
AC006001.3-201ENST00000449307 PANO1I0J062 215 aa7.53□□□□□ -1.2
AC006001.3-201ENST00000449307 Q6ZR54 194 aa7.5□□□□□ -1.21
AC006001.3-201ENST00000449307 A0A087X002 238 aa7.5□□□□□ -1.21
AC006001.3-201ENST00000449307 LINC00472Q9H8W2 130 aa7.5□□□□□ -1.21
AC006001.3-201ENST00000449307 SPRR1BP22528 89 aa7.48□□□□□ -1.21
AC006001.3-201ENST00000449307 A0A0A0MQY5 61 aa7.46□□□□□ -1.22
AC006001.3-201ENST00000449307 KRTAP26-1Q6PEX3 210 aa7.45□□□□□ -1.22
AC006001.3-201ENST00000449307 STAB1Q9NY15 2570 aa7.44□□□□□ -1.22
AC006001.3-201ENST00000449307 Q75L30 129 aa7.44□□□□□ -1.22
AC006001.3-201ENST00000449307 BAHCC1Q9P281 2608 aa7.43□□□□□ -1.22
AC006001.3-201ENST00000449307 CYSTM1Q9H1C7 97 aa7.43□□□□□ -1.22
AC006001.3-201ENST00000449307 RPL37P61927 97 aaKnown RBP7.43□□□□□ -1.22
AC006001.3-201ENST00000449307 TEX15Q9BXT5 2789 aa7.42□□□□□ -1.22
AC006001.3-201ENST00000449307 C20orf166-AS1Q96NR2 134 aa7.41□□□□□ -1.22
AC006001.3-201ENST00000449307 SPATA8Q6RVD6 105 aa7.39□□□□□ -1.23
AC006001.3-201ENST00000449307 TEP1Q99973 2627 aaKnown RBP7.38□□□□□ -1.23
AC006001.3-201ENST00000449307 LINC01558Q9Y6Z2 57 aa7.38□□□□□ -1.23
AC006001.3-201ENST00000449307 SETXQ7Z333 2677 aaKnown RBP7.38□□□□□ -1.23
AC006001.3-201ENST00000449307 ROMO1P60602 79 aa7.37□□□□□ -1.23
AC006001.3-201ENST00000449307 Q5VV11 94 aa7.35□□□□□ -1.23
AC006001.3-201ENST00000449307 A8MUU9 505 aa7.33□□□□□ -1.24
AC006001.3-201ENST00000449307 PCNTO95613 3336 aa7.33□□□□□ -1.24
AC006001.3-201ENST00000449307 KRTAP21-3Q3LHN1 58 aa7.32□□□□□ -1.24
AC006001.3-201ENST00000449307 CHD7Q9P2D1 2997 aa7.3□□□□□ -1.24
AC006001.3-201ENST00000449307 AKAP13Q12802 2813 aa7.29□□□□□ -1.24
AC006001.3-201ENST00000449307 KRTAP16-1A8MUX0 517 aa7.27□□□□□ -1.25
AC006001.3-201ENST00000449307 CHD6Q8TD26 2715 aa7.26□□□□□ -1.25
AC006001.3-201ENST00000449307 MKI67P46013 3256 aaKnown RBP7.25□□□□□ -1.25
AC006001.3-201ENST00000449307 NBEAL1Q6ZS30 2694 aa7.25□□□□□ -1.25
AC006001.3-201ENST00000449307 Q6ZRN7 208 aaPredicted RBP7.23□□□□□ -1.25
AC006001.3-201ENST00000449307 KRTAP11-1Q8IUC1 163 aa7.23□□□□□ -1.25
AC006001.3-201ENST00000449307 MGAQ8IWI9 3026 aa7.23□□□□□ -1.25
AC006001.3-201ENST00000449307 NOTCH2NLQ7Z3S9 236 aa7.22□□□□□ -1.25
AC006001.3-201ENST00000449307 CFAP54Q96N23 3096 aa7.22□□□□□ -1.25
AC006001.3-201ENST00000449307 RPS29P62273 56 aaKnown RBP7.21□□□□□ -1.26
AC006001.3-201ENST00000449307 CENPEQ02224 2701 aa7.21□□□□□ -1.26
AC006001.3-201ENST00000449307 A0A1B0GVY2 172 aa7.2□□□□□ -1.26
AC006001.3-201ENST00000449307 UNC79Q9P2D8 2635 aa7.19□□□□□ -1.26
AC006001.3-201ENST00000449307 KRTAP4-16G5E9R7 235 aaPredicted RBP7.18□□□□□ -1.26
AC006001.3-201ENST00000449307 A0A0C4DFX4 3053 aa7.17□□□□□ -1.26
AC006001.3-201ENST00000449307 COL6A5A8TX70 2615 aa7.17□□□□□ -1.26
AC006001.3-201ENST00000449307 KRTAP13-2Q52LG2 175 aa7.16□□□□□ -1.26
AC006001.3-201ENST00000449307 DMBT1Q9UGM3 2413 aaPredicted RBP7.16□□□□□ -1.26
AC006001.3-201ENST00000449307 LAMA3Q16787 3333 aa7.15□□□□□ -1.27
AC006001.3-201ENST00000449307 XIRP2A4UGR9 3374 aa7.14□□□□□ -1.27
AC006001.3-201ENST00000449307 A8MU10 97 aa7.09□□□□□ -1.27
AC006001.3-201ENST00000449307 ASB16-AS1Q495Z4 193 aa7.09□□□□□ -1.27
AC006001.3-201ENST00000449307 PRUNE2Q8WUY3 3088 aa7.09□□□□□ -1.28
AC006001.3-201ENST00000449307 KRTAP10-8P60410 259 aa7.08□□□□□ -1.28
AC006001.3-201ENST00000449307 ITPR2Q14571 2701 aa7.08□□□□□ -1.28
AC006001.3-201ENST00000449307 RANBP2P49792 3224 aaKnown RBP7.07□□□□□ -1.28
AC006001.3-201ENST00000449307 FRYQ5TBA9 3013 aa7.07□□□□□ -1.28
AC006001.3-201ENST00000449307 TNP1P09430 55 aa7.07□□□□□ -1.28
AC006001.3-201ENST00000449307 BRCA2P51587 3418 aa7.06□□□□□ -1.28
AC006001.3-201ENST00000449307 WDFY4Q6ZS81 3184 aa7.05□□□□□ -1.28
AC006001.3-201ENST00000449307 CRYBG3Q68DQ2 2970 aa7.05□□□□□ -1.28
AC006001.3-201ENST00000449307 KRTAP29-1A8MX34 341 aaPredicted RBP7.03□□□□□ -1.28
AC006001.3-201ENST00000449307 TRIOO75962 3097 aa7.03□□□□□ -1.28
AC006001.3-201ENST00000449307 NDUFAF8A1L188 74 aa7.02□□□□□ -1.29
AC006001.3-201ENST00000449307 HTTP42858 3142 aa7.01□□□□□ -1.29
AC006001.3-201ENST00000449307 CHD9Q3L8U1 2897 aa7.01□□□□□ -1.29
AC006001.3-201ENST00000449307 KRTAP10-10P60014 251 aa7.01□□□□□ -1.29
AC006001.3-201ENST00000449307 UNC80Q8N2C7 3258 aa7□□□□□ -1.29
AC006001.3-201ENST00000449307 KRTAP7-1Q8IUC3 87 aa7□□□□□ -1.29
AC006001.3-201ENST00000449307 GCN1Q92616 2671 aaKnown RBP6.99□□□□□ -1.29
AC006001.3-201ENST00000449307 CELSR3Q9NYQ7 3312 aa6.99□□□□□ -1.29
AC006001.3-201ENST00000449307 STAB2Q8WWQ8 2551 aa6.98□□□□□ -1.29
AC006001.3-201ENST00000449307 ZNF292O60281 2723 aa6.97□□□□□ -1.29
AC006001.3-201ENST00000449307 KMT2BQ9UMN6 2715 aaPredicted RBP6.97□□□□□ -1.29
AC006001.3-201ENST00000449307 LAMA2P24043 3122 aaKnown RBP6.96□□□□□ -1.29
AC006001.3-201ENST00000449307 NOTCH1P46531 2555 aa6.96□□□□□ -1.3
AC006001.3-201ENST00000449307 A6NN06 94 aa6.95□□□□□ -1.3
AC006001.3-201ENST00000449307 IGSF10Q6WRI0 2623 aa6.95□□□□□ -1.3
AC006001.3-201ENST00000449307 KRTAP25-1Q3LHN0 102 aa6.95□□□□□ -1.3
AC006001.3-201ENST00000449307 C10orf95Q9H7T3 257 aa6.94□□□□□ -1.3
AC006001.3-201ENST00000449307 DSPP15924 2871 aaKnown RBP6.94□□□□□ -1.3
AC006001.3-201ENST00000449307 KRTAP13-1Q8IUC0 172 aa6.93□□□□□ -1.3
AC006001.3-201ENST00000449307 XP32Q5T750 250 aa6.92□□□□□ -1.3
AC006001.3-201ENST00000449307 CDH23Q9H251 3354 aa6.91□□□□□ -1.3
AC006001.3-201ENST00000449307 NBEAL2Q6ZNJ1 2754 aa6.91□□□□□ -1.3
AC006001.3-201ENST00000449307 TRANK1O15050 2925 aa6.85□□□□□ -1.31
AC006001.3-201ENST00000449307 PRO2289Q9P1D8 64 aa6.84□□□□□ -1.31
AC006001.3-201ENST00000449307 REV3LO60673 3130 aa6.84□□□□□ -1.31
AC006001.3-201ENST00000449307 TPRXLQ17RH7 258 aa6.81□□□□□ -1.32
AC006001.3-201ENST00000449307 NSD1Q96L73 2696 aaPredicted RBP6.8□□□□□ -1.32
AC006001.3-201ENST00000449307 COL6A3P12111 3177 aa6.8□□□□□ -1.32
AC006001.3-201ENST00000449307 UBR5O95071 2799 aaPredicted RBP6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms