RNA–Protein interactions for RNA: ENST00000448878.6

CHCHD3-203, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 5 BASIC

Gene CHCHD3, Length 1,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-203ENST00000448878 OBSCN-AS1Q96MR7 158 aa9.33□□□□□ -0.92
CHCHD3-203ENST00000448878 TRBV7-6A0A0J9YX20 115 aa9.32□□□□□ -0.92
CHCHD3-203ENST00000448878 ZNF815PA8K554 130 aa9.32□□□□□ -0.92
CHCHD3-203ENST00000448878 PYY3Q5JQD4 70 aa9.32□□□□□ -0.92
CHCHD3-203ENST00000448878 LINC01545Q5VT33 79 aa9.32□□□□□ -0.92
CHCHD3-203ENST00000448878 A6NDN8 102 aa9.31□□□□□ -0.92
CHCHD3-203ENST00000448878 F8WEM9 126 aa9.3□□□□□ -0.92
CHCHD3-203ENST00000448878 KRTAP9-8Q9BYQ0 159 aa9.3□□□□□ -0.92
CHCHD3-203ENST00000448878 USH2AO75445 5202 aa9.29□□□□□ -0.92
CHCHD3-203ENST00000448878 SSPOA2VEC9 5147 aa9.28□□□□□ -0.92
CHCHD3-203ENST00000448878 HSBP1L1C9JCN9 74 aa9.28□□□□□ -0.92
CHCHD3-203ENST00000448878 Q75L30 129 aa9.28□□□□□ -0.92
CHCHD3-203ENST00000448878 TTTY13Q9BZ97 58 aa9.28□□□□□ -0.92
CHCHD3-203ENST00000448878 NHP2Q9NX24 153 aaKnown RBP9.27□□□□□ -0.93
CHCHD3-203ENST00000448878 C12orf57Q99622 126 aa9.26□□□□□ -0.93
CHCHD3-203ENST00000448878 VAMP8Q9BV40 100 aa9.25□□□□□ -0.93
CHCHD3-203ENST00000448878 TRBV20-1A0A075B6N2 111 aa9.24□□□□□ -0.93
CHCHD3-203ENST00000448878 A4D1N5 150 aa9.24□□□□□ -0.93
CHCHD3-203ENST00000448878 SCGB1D4Q6XE38 83 aa9.24□□□□□ -0.93
CHCHD3-203ENST00000448878 ATOH7Q8N100 152 aa9.24□□□□□ -0.93
CHCHD3-203ENST00000448878 Q96NJ1 140 aa9.24□□□□□ -0.93
CHCHD3-203ENST00000448878 COPS9Q8WXC6 57 aa9.22□□□□□ -0.93
CHCHD3-203ENST00000448878 TRBV7-7A0A0K0K1E9 115 aa9.21□□□□□ -0.94
CHCHD3-203ENST00000448878 PAM16Q9Y3D7 125 aa9.2□□□□□ -0.94
CHCHD3-203ENST00000448878 SPATA45Q537H7 98 aa9.19□□□□□ -0.94
CHCHD3-203ENST00000448878 KRTAP19-1Q8IUB9 90 aa9.19□□□□□ -0.94
CHCHD3-203ENST00000448878 Q6JHZ5 121 aa9.18□□□□□ -0.94
CHCHD3-203ENST00000448878 SMIM11BQ8TCY0 68 aa9.18□□□□□ -0.94
CHCHD3-203ENST00000448878 CLEC2BQ92478 149 aa9.18□□□□□ -0.94
CHCHD3-203ENST00000448878 IGFL1Q6UW32 110 aa9.17□□□□□ -0.94
CHCHD3-203ENST00000448878 MUSTN1Q8IVN3 82 aa9.17□□□□□ -0.94
CHCHD3-203ENST00000448878 FCGBPQ9Y6R7 5405 aaPredicted RBP9.16□□□□□ -0.94
CHCHD3-203ENST00000448878 IFITM1P13164 125 aa9.16□□□□□ -0.94
CHCHD3-203ENST00000448878 LST1O00453 97 aa9.15□□□□□ -0.94
CHCHD3-203ENST00000448878 VAMP3Q15836 100 aa9.15□□□□□ -0.94
CHCHD3-203ENST00000448878 TRAV13-2A0A0B4J235 113 aa9.14□□□□□ -0.95
CHCHD3-203ENST00000448878 FAM236DA0A1B0GTK5 79 aa9.14□□□□□ -0.95
CHCHD3-203ENST00000448878 TSTD3H0UI37 97 aa9.14□□□□□ -0.95
CHCHD3-203ENST00000448878 MT2AP02795 61 aa9.14□□□□□ -0.95
CHCHD3-203ENST00000448878 FAM236CP0DP71 79 aa9.14□□□□□ -0.95
CHCHD3-203ENST00000448878 ANKRD39Q53RE8 183 aa9.14□□□□□ -0.95
CHCHD3-203ENST00000448878 Q6ZQY7 126 aa9.13□□□□□ -0.95
CHCHD3-203ENST00000448878 OCIAD2Q56VL3 154 aa9.12□□□□□ -0.95
CHCHD3-203ENST00000448878 hADV29S1A0JD25 119 aa9.11□□□□□ -0.95
CHCHD3-203ENST00000448878 LINC00575Q6W349 94 aa9.11□□□□□ -0.95
CHCHD3-203ENST00000448878 LCE2BO14633 110 aa9.1□□□□□ -0.95
CHCHD3-203ENST00000448878 COX8AP10176 69 aa9.1□□□□□ -0.95
CHCHD3-203ENST00000448878 Q6ZVH6 145 aa9.1□□□□□ -0.95
CHCHD3-203ENST00000448878 UQCR10Q9UDW1 63 aa9.1□□□□□ -0.95
CHCHD3-203ENST00000448878 KRTAP10-10P60014 251 aa9.09□□□□□ -0.95
CHCHD3-203ENST00000448878 C14orf144Q96I85 54 aa9.09□□□□□ -0.95
CHCHD3-203ENST00000448878 C20orf166-AS1Q96NR2 134 aa9.08□□□□□ -0.96
CHCHD3-203ENST00000448878 DLEU1O43261 78 aa9.07□□□□□ -0.96
CHCHD3-203ENST00000448878 A8MUU9 505 aa9.06□□□□□ -0.96
CHCHD3-203ENST00000448878 MT1FP04733 61 aa9.06□□□□□ -0.96
CHCHD3-203ENST00000448878 SNHG12Q9BXW3 62 aa9.06□□□□□ -0.96
CHCHD3-203ENST00000448878 H3BUT2 72 aa9.04□□□□□ -0.96
CHCHD3-203ENST00000448878 MACF1Q9UPN3 7388 aaKnown RBP9.02□□□□□ -0.97
CHCHD3-203ENST00000448878 PCP4L1A6NKN8 68 aa9.02□□□□□ -0.97
CHCHD3-203ENST00000448878 KRTAP9-3Q9BYQ3 159 aa9.02□□□□□ -0.97
CHCHD3-203ENST00000448878 SS18L2Q9UHA2 77 aa9.02□□□□□ -0.97
CHCHD3-203ENST00000448878 LINC00846Q9NV44 126 aa9.01□□□□□ -0.97
CHCHD3-203ENST00000448878 SYNE2Q8WXH0 6885 aaKnown RBP9□□□□□ -0.97
CHCHD3-203ENST00000448878 DSCR10P59022 87 aa9□□□□□ -0.97
CHCHD3-203ENST00000448878 RBM12B-AS1Q9P1G2 102 aa9□□□□□ -0.97
CHCHD3-203ENST00000448878 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.99□□□□□ -0.97
CHCHD3-203ENST00000448878 HIGD1BQ9P298 99 aa8.99□□□□□ -0.97
CHCHD3-203ENST00000448878 PPDPFLQ8WWR9 84 aa8.96□□□□□ -0.98
CHCHD3-203ENST00000448878 C2orf91Q6ZV80 131 aa8.95□□□□□ -0.98
CHCHD3-203ENST00000448878 HSD52Q0P140 79 aa8.94□□□□□ -0.98
CHCHD3-203ENST00000448878 A0A087WSZ3 146 aa8.93□□□□□ -0.98
CHCHD3-203ENST00000448878 KRTAP16-1A8MUX0 517 aa8.93□□□□□ -0.98
CHCHD3-203ENST00000448878 M0R143 59 aa8.93□□□□□ -0.98
CHCHD3-203ENST00000448878 TEN1Q86WV5 123 aa8.93□□□□□ -0.98
CHCHD3-203ENST00000448878 HIST1H4GQ99525 98 aa8.93□□□□□ -0.98
CHCHD3-203ENST00000448878 BVES-AS1Q5T3Y7 98 aa8.91□□□□□ -0.98
CHCHD3-203ENST00000448878 SIGMAR1Q99720 223 aa8.91□□□□□ -0.98
CHCHD3-203ENST00000448878 LINC00313P59037 77 aa8.89□□□□□ -0.99
CHCHD3-203ENST00000448878 HRES1P13985 223 aa8.88□□□□□ -0.99
CHCHD3-203ENST00000448878 TMEM238LA0A1B0GVL6 79 aa8.87□□□□□ -0.99
CHCHD3-203ENST00000448878 A6NJY4 79 aa8.87□□□□□ -0.99
CHCHD3-203ENST00000448878 CEND1Q8N111 149 aa8.87□□□□□ -0.99
CHCHD3-203ENST00000448878 NDUFV3P56181 108 aaKnown RBP8.85□□□□□ -0.99
CHCHD3-203ENST00000448878 BATFQ16520 125 aa8.85□□□□□ -0.99
CHCHD3-203ENST00000448878 KRTAP19-6Q3LI70 58 aa8.85□□□□□ -0.99
CHCHD3-203ENST00000448878 MPLKIPQ8TAP9 179 aa8.85□□□□□ -0.99
CHCHD3-203ENST00000448878 SNCGO76070 127 aa8.84□□□□□ -0.99
CHCHD3-203ENST00000448878 MTURNQ8N3F0 131 aa8.83□□□□□ -1
CHCHD3-203ENST00000448878 IGKV4-1P06312 121 aa8.82□□□□□ -1
CHCHD3-203ENST00000448878 H3BMG7 143 aa8.81□□□□□ -1
CHCHD3-203ENST00000448878 FXYD2P54710 66 aa8.81□□□□□ -1
CHCHD3-203ENST00000448878 NOTCH2NLQ7Z3S9 236 aa8.81□□□□□ -1
CHCHD3-203ENST00000448878 COL5A1-AS1Q5SY13 56 aa8.78□□□□□ -1
CHCHD3-203ENST00000448878 FABP2P12104 132 aa8.77□□□□□ -1.01
CHCHD3-203ENST00000448878 RAB37Q96AX2 223 aa8.77□□□□□ -1.01
CHCHD3-203ENST00000448878 A0A0B4J2C4 111 aa8.75□□□□□ -1.01
CHCHD3-203ENST00000448878 DEFB116Q30KQ4 102 aa8.75□□□□□ -1.01
CHCHD3-203ENST00000448878 KRTAP6-3Q3LI67 103 aa8.75□□□□□ -1.01
CHCHD3-203ENST00000448878 A0A1W2PNM2 257 aa8.74□□□□□ -1.01
CHCHD3-203ENST00000448878 IGHV6-1A0A0B4J1U7 121 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms