RNA–Protein interactions for RNA: ENST00000448520.5

PDLIM2-213, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-213ENST00000448520 FAM229BQ4G0N7 80 aa8□□□□□ -1.13
PDLIM2-213ENST00000448520 ZNF706Q9Y5V0 76 aaPredicted RBP8□□□□□ -1.13
PDLIM2-213ENST00000448520 LST1O00453 97 aa7.99□□□□□ -1.13
PDLIM2-213ENST00000448520 IGLV5-48A0A075B6I7 105 aa7.98□□□□□ -1.13
PDLIM2-213ENST00000448520 LINC00483Q53H64 154 aa7.98□□□□□ -1.13
PDLIM2-213ENST00000448520 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.98□□□□□ -1.13
PDLIM2-213ENST00000448520 Q8N377 158 aa7.98□□□□□ -1.13
PDLIM2-213ENST00000448520 C3orf22Q8N5N4 141 aa7.98□□□□□ -1.13
PDLIM2-213ENST00000448520 KRTAP13-2Q52LG2 175 aa7.97□□□□□ -1.13
PDLIM2-213ENST00000448520 LINC00304Q8N9R0 145 aa7.97□□□□□ -1.13
PDLIM2-213ENST00000448520 A0A1B0GX51 115 aa7.96□□□□□ -1.14
PDLIM2-213ENST00000448520 TRACP01848 142 aa7.96□□□□□ -1.14
PDLIM2-213ENST00000448520 FABP2P12104 132 aa7.96□□□□□ -1.14
PDLIM2-213ENST00000448520 SPRR1BP22528 89 aa7.96□□□□□ -1.14
PDLIM2-213ENST00000448520 TEX49A0A1B0GTD5 131 aa7.95□□□□□ -1.14
PDLIM2-213ENST00000448520 ATXN8Q156A1 80 aa7.95□□□□□ -1.14
PDLIM2-213ENST00000448520 LYRM7Q5U5X0 104 aa7.95□□□□□ -1.14
PDLIM2-213ENST00000448520 SMIM29Q86T20 159 aa7.95□□□□□ -1.14
PDLIM2-213ENST00000448520 SPCS1Q9Y6A9 102 aa7.95□□□□□ -1.14
PDLIM2-213ENST00000448520 IGLV9-49A0A0B4J1Y8 123 aa7.94□□□□□ -1.14
PDLIM2-213ENST00000448520 SNCGO76070 127 aa7.94□□□□□ -1.14
PDLIM2-213ENST00000448520 DNAL4O96015 105 aa7.94□□□□□ -1.14
PDLIM2-213ENST00000448520 UBE2V1Q13404 147 aa7.93□□□□□ -1.14
PDLIM2-213ENST00000448520 MTURNQ8N3F0 131 aa7.93□□□□□ -1.14
PDLIM2-213ENST00000448520 MOBPQ13875 183 aa7.92□□□□□ -1.14
PDLIM2-213ENST00000448520 TPRXLQ17RH7 258 aa7.92□□□□□ -1.14
PDLIM2-213ENST00000448520 CDIP1Q9H305 208 aa7.92□□□□□ -1.14
PDLIM2-213ENST00000448520 ORMDL1Q9P0S3 153 aa7.92□□□□□ -1.14
PDLIM2-213ENST00000448520 IGLV7-46A0A075B6I9 117 aa7.91□□□□□ -1.14
PDLIM2-213ENST00000448520 TRBV20-1A0A075B6N2 111 aa7.91□□□□□ -1.14
PDLIM2-213ENST00000448520 C9JAW5 83 aa7.91□□□□□ -1.14
PDLIM2-213ENST00000448520 H3BMG7 143 aa7.91□□□□□ -1.14
PDLIM2-213ENST00000448520 RETNLBQ9BQ08 111 aa7.91□□□□□ -1.14
PDLIM2-213ENST00000448520 A0A0G2JQZ4 141 aa7.9□□□□□ -1.14
PDLIM2-213ENST00000448520 C9orf153Q5TBE3 101 aa7.9□□□□□ -1.14
PDLIM2-213ENST00000448520 KRTAP9-2Q9BYQ4 174 aa7.9□□□□□ -1.14
PDLIM2-213ENST00000448520 LAMTOR3Q9UHA4 124 aa7.9□□□□□ -1.14
PDLIM2-213ENST00000448520 A0A1B0GV72 72 aa7.89□□□□□ -1.15
PDLIM2-213ENST00000448520 K7EP34 96 aa7.89□□□□□ -1.15
PDLIM2-213ENST00000448520 BAALC-AS2P0C853 105 aa7.89□□□□□ -1.15
PDLIM2-213ENST00000448520 OCIAD2Q56VL3 154 aa7.89□□□□□ -1.15
PDLIM2-213ENST00000448520 LCE2AQ5TA79 106 aaPredicted RBP7.89□□□□□ -1.15
PDLIM2-213ENST00000448520 SPAG11AQ6PDA7 123 aa7.89□□□□□ -1.15
PDLIM2-213ENST00000448520 NDUFV3P56181 108 aaKnown RBP7.87□□□□□ -1.15
PDLIM2-213ENST00000448520 Q8NBF4 154 aa7.86□□□□□ -1.15
PDLIM2-213ENST00000448520 PPDPFLQ8WWR9 84 aa7.86□□□□□ -1.15
PDLIM2-213ENST00000448520 FAT4Q6V0I7 4981 aa7.85□□□□□ -1.15
PDLIM2-213ENST00000448520 F8WEM9 126 aa7.84□□□□□ -1.15
PDLIM2-213ENST00000448520 TMEM256-PLSCR3K7ERE1 68 aa7.84□□□□□ -1.15
PDLIM2-213ENST00000448520 C4orf48Q5BLP8 95 aa7.84□□□□□ -1.15
PDLIM2-213ENST00000448520 SMCPP49901 116 aaPredicted RBP7.83□□□□□ -1.16
PDLIM2-213ENST00000448520 GTF2H5Q6ZYL4 71 aa7.83□□□□□ -1.16
PDLIM2-213ENST00000448520 MUC17Q685J3 4493 aa7.82□□□□□ -1.16
PDLIM2-213ENST00000448520 FP248Q71RG6 208 aaPredicted RBP7.82□□□□□ -1.16
PDLIM2-213ENST00000448520 ANKRD29Q8N6D5 301 aa7.82□□□□□ -1.16
PDLIM2-213ENST00000448520 PRO0461Q9UI25 63 aa7.82□□□□□ -1.16
PDLIM2-213ENST00000448520 GHRHP01286 108 aa7.81□□□□□ -1.16
PDLIM2-213ENST00000448520 HRCT1Q6UXD1 115 aa7.81□□□□□ -1.16
PDLIM2-213ENST00000448520 SSBP3-AS1Q7Z2R9 100 aa7.81□□□□□ -1.16
PDLIM2-213ENST00000448520 IGLV8-61A0A075B6I0 122 aa7.8□□□□□ -1.16
PDLIM2-213ENST00000448520 H3BQ85 93 aa7.8□□□□□ -1.16
PDLIM2-213ENST00000448520 IGFL1Q6UW32 110 aa7.8□□□□□ -1.16
PDLIM2-213ENST00000448520 H3BT86 120 aa7.79□□□□□ -1.16
PDLIM2-213ENST00000448520 SPINK1P00995 79 aa7.77□□□□□ -1.17
PDLIM2-213ENST00000448520 Q6JHZ5 121 aa7.75□□□□□ -1.17
PDLIM2-213ENST00000448520 C14orf132Q9NPU4 83 aa7.74□□□□□ -1.17
PDLIM2-213ENST00000448520 A0A1W2PNM2 257 aa7.73□□□□□ -1.17
PDLIM2-213ENST00000448520 RBM3P98179 157 aaKnown RBP7.73□□□□□ -1.17
PDLIM2-213ENST00000448520 KRTAP13-3Q3SY46 172 aa7.73□□□□□ -1.17
PDLIM2-213ENST00000448520 OBSCN-AS1Q96MR7 158 aa7.73□□□□□ -1.17
PDLIM2-213ENST00000448520 TRBV7-4A0A0J9YYF1 115 aa7.72□□□□□ -1.17
PDLIM2-213ENST00000448520 ASB16-AS1Q495Z4 193 aa7.72□□□□□ -1.17
PDLIM2-213ENST00000448520 KRTAP9-6A0A140TA67 174 aa7.71□□□□□ -1.18
PDLIM2-213ENST00000448520 K7ERU9 68 aa7.71□□□□□ -1.18
PDLIM2-213ENST00000448520 F8W1H4 67 aa7.7□□□□□ -1.18
PDLIM2-213ENST00000448520 JMJD7-PLA2G4BH0Y9G9 81 aa7.7□□□□□ -1.18
PDLIM2-213ENST00000448520 SEC61BP60468 96 aaKnown RBP7.7□□□□□ -1.18
PDLIM2-213ENST00000448520 RPS29P62273 56 aaKnown RBP7.7□□□□□ -1.18
PDLIM2-213ENST00000448520 DSCR8Q96T75 97 aa7.7□□□□□ -1.18
PDLIM2-213ENST00000448520 VPS25Q9BRG1 176 aa7.7□□□□□ -1.18
PDLIM2-213ENST00000448520 TRBV7-7A0A0K0K1E9 115 aa7.69□□□□□ -1.18
PDLIM2-213ENST00000448520 CD164Q04900 197 aa7.69□□□□□ -1.18
PDLIM2-213ENST00000448520 CCKP06307 115 aa7.68□□□□□ -1.18
PDLIM2-213ENST00000448520 ETDBQ3ZM63 59 aa7.68□□□□□ -1.18
PDLIM2-213ENST00000448520 Q6ZQT0 140 aa7.68□□□□□ -1.18
PDLIM2-213ENST00000448520 LOC110117498A0A087WWA1 95 aa7.67□□□□□ -1.18
PDLIM2-213ENST00000448520 TEN1Q86WV5 123 aa7.67□□□□□ -1.18
PDLIM2-213ENST00000448520 A0A087WSZ3 146 aa7.65□□□□□ -1.18
PDLIM2-213ENST00000448520 Q6Q795 121 aa7.65□□□□□ -1.18
PDLIM2-213ENST00000448520 LIMD2Q9BT23 127 aa7.62□□□□□ -1.19
PDLIM2-213ENST00000448520 J3QR89 54 aa7.6□□□□□ -1.19
PDLIM2-213ENST00000448520 KRTAP4-1Q9BYQ7 146 aa7.6□□□□□ -1.19
PDLIM2-213ENST00000448520 PDE6GP18545 87 aa7.59□□□□□ -1.19
PDLIM2-213ENST00000448520 XP32Q5T750 250 aa7.59□□□□□ -1.19
PDLIM2-213ENST00000448520 Q5XG85 94 aa7.59□□□□□ -1.19
PDLIM2-213ENST00000448520 LCE2DQ5TA82 110 aaPredicted RBP7.58□□□□□ -1.2
PDLIM2-213ENST00000448520 C1orf195Q5TG92 126 aa7.58□□□□□ -1.2
PDLIM2-213ENST00000448520 Q96NJ1 140 aa7.56□□□□□ -1.2
PDLIM2-213ENST00000448520 DEFB116Q30KQ4 102 aa7.54□□□□□ -1.2
PDLIM2-213ENST00000448520 SS18L2Q9UHA2 77 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms