RNA–Protein interactions for RNA: ENST00000448276.6

SMARCD2-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD2, Length 2,716 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-203ENST00000448276 LINC00208Q96KT6 92 aa12.95□□□□□ -0.34
SMARCD2-203ENST00000448276 REG3GQ6UW15 175 aa12.94□□□□□ -0.34
SMARCD2-203ENST00000448276 PRR15Q8IV56 129 aa12.94□□□□□ -0.34
SMARCD2-203ENST00000448276 MAST4O15021 2626 aa12.93□□□□□ -0.34
SMARCD2-203ENST00000448276 CYP4F30PQ9H0H9 118 aa12.93□□□□□ -0.34
SMARCD2-203ENST00000448276 DNAH10OSP0CZ25 163 aa12.92□□□□□ -0.34
SMARCD2-203ENST00000448276 C11orf45Q8TAV5 145 aa12.92□□□□□ -0.34
SMARCD2-203ENST00000448276 SEC61GP60059 68 aa12.9□□□□□ -0.35
SMARCD2-203ENST00000448276 KRTAP24-1Q3LI83 254 aa12.9□□□□□ -0.35
SMARCD2-203ENST00000448276 LINC00588Q9Y4M8 146 aa12.89□□□□□ -0.35
SMARCD2-203ENST00000448276 MP68P56378 58 aa12.89□□□□□ -0.35
SMARCD2-203ENST00000448276 NOTCH1P46531 2555 aa12.88□□□□□ -0.35
SMARCD2-203ENST00000448276 IGKV2-24A0A0C4DH68 120 aa12.87□□□□□ -0.35
SMARCD2-203ENST00000448276 DNAH1Q9P2D7 4330 aa12.86□□□□□ -0.35
SMARCD2-203ENST00000448276 B9D2Q9BPU9 175 aa12.86□□□□□ -0.35
SMARCD2-203ENST00000448276 CMYA5Q8N3K9 4069 aa12.85□□□□□ -0.35
SMARCD2-203ENST00000448276 CSMD3Q7Z407 3707 aa12.84□□□□□ -0.35
SMARCD2-203ENST00000448276 NDUFB1O75438 58 aa12.83□□□□□ -0.35
SMARCD2-203ENST00000448276 H0Y9P7 68 aa12.83□□□□□ -0.36
SMARCD2-203ENST00000448276 PMAIP1Q13794 54 aa12.83□□□□□ -0.36
SMARCD2-203ENST00000448276 KRTAP29-1A8MX34 341 aaPredicted RBP12.82□□□□□ -0.36
SMARCD2-203ENST00000448276 DNAH10Q8IVF4 4471 aa12.82□□□□□ -0.36
SMARCD2-203ENST00000448276 Q5VV11 94 aa12.81□□□□□ -0.36
SMARCD2-203ENST00000448276 COL6A5A8TX70 2615 aa12.8□□□□□ -0.36
SMARCD2-203ENST00000448276 CASC2Q6XLA1 102 aa12.8□□□□□ -0.36
SMARCD2-203ENST00000448276 A0A096LNI7 61 aa12.8□□□□□ -0.36
SMARCD2-203ENST00000448276 UBE2AP49459 152 aa12.79□□□□□ -0.36
SMARCD2-203ENST00000448276 CNBPP62633 177 aaKnown RBP12.79□□□□□ -0.36
SMARCD2-203ENST00000448276 KRTAP11-1Q8IUC1 163 aa12.76□□□□□ -0.37
SMARCD2-203ENST00000448276 LYSTQ99698 3801 aa12.76□□□□□ -0.37
SMARCD2-203ENST00000448276 Q8N9P0 234 aaPredicted RBP12.74□□□□□ -0.37
SMARCD2-203ENST00000448276 CHKB-CPT1BH3BT56 60 aa12.73□□□□□ -0.37
SMARCD2-203ENST00000448276 NBEAL1Q6ZS30 2694 aa12.73□□□□□ -0.37
SMARCD2-203ENST00000448276 IGLV8-61A0A075B6I0 122 aa12.72□□□□□ -0.37
SMARCD2-203ENST00000448276 PRR15LQ9BU68 103 aa12.72□□□□□ -0.37
SMARCD2-203ENST00000448276 CHTF8P0CG12 524 aa12.7□□□□□ -0.38
SMARCD2-203ENST00000448276 PHF5AQ7RTV0 110 aaKnown RBP12.69□□□□□ -0.38
SMARCD2-203ENST00000448276 H0Y9J4 135 aa12.68□□□□□ -0.38
SMARCD2-203ENST00000448276 A8MWP4 228 aa12.67□□□□□ -0.38
SMARCD2-203ENST00000448276 LINC00472Q9H8W2 130 aa12.67□□□□□ -0.38
SMARCD2-203ENST00000448276 SPANXA2-OT1Q8N9U9 137 aa12.66□□□□□ -0.38
SMARCD2-203ENST00000448276 C9orf163Q8N9P6 203 aa12.65□□□□□ -0.38
SMARCD2-203ENST00000448276 COL7A1Q02388 2944 aa12.65□□□□□ -0.38
SMARCD2-203ENST00000448276 DNAH3Q8TD57 4116 aa12.64□□□□□ -0.39
SMARCD2-203ENST00000448276 C16orf90A8MZG2 172 aa12.64□□□□□ -0.39
SMARCD2-203ENST00000448276 PCOTHQ58A44 107 aa12.64□□□□□ -0.39
SMARCD2-203ENST00000448276 KRTAP1-5Q9BYS1 174 aa12.64□□□□□ -0.39
SMARCD2-203ENST00000448276 SPTSSBQ8NFR3 76 aa12.63□□□□□ -0.39
SMARCD2-203ENST00000448276 COA5Q86WW8 74 aa12.61□□□□□ -0.39
SMARCD2-203ENST00000448276 LIMD2Q9BT23 127 aa12.6□□□□□ -0.39
SMARCD2-203ENST00000448276 TENM2Q9NT68 2774 aa12.6□□□□□ -0.39
SMARCD2-203ENST00000448276 MMP24-AS1A0A0U1RRL7 71 aa12.59□□□□□ -0.39
SMARCD2-203ENST00000448276 H3BPC8 53 aa12.59□□□□□ -0.39
SMARCD2-203ENST00000448276 MGAM2Q2M2H8 2515 aa12.58□□□□□ -0.4
SMARCD2-203ENST00000448276 LCA10Q71F78 164 aa12.58□□□□□ -0.4
SMARCD2-203ENST00000448276 DNAH9Q9NYC9 4486 aa12.58□□□□□ -0.4
SMARCD2-203ENST00000448276 A6NED7 52 aa12.54□□□□□ -0.4
SMARCD2-203ENST00000448276 HUWE1Q7Z6Z7 4374 aaKnown RBP12.52□□□□□ -0.4
SMARCD2-203ENST00000448276 CD164Q04900 197 aa12.52□□□□□ -0.41
SMARCD2-203ENST00000448276 IGLV7-46A0A075B6I9 117 aa12.51□□□□□ -0.41
SMARCD2-203ENST00000448276 SPRR1BP22528 89 aa12.51□□□□□ -0.41
SMARCD2-203ENST00000448276 SPAG11AQ6PDA7 123 aa12.5□□□□□ -0.41
SMARCD2-203ENST00000448276 IGLV9-49A0A0B4J1Y8 123 aa12.49□□□□□ -0.41
SMARCD2-203ENST00000448276 K7EIL1 84 aa12.49□□□□□ -0.41
SMARCD2-203ENST00000448276 Q75L30 129 aa12.48□□□□□ -0.41
SMARCD2-203ENST00000448276 PANO1I0J062 215 aa12.46□□□□□ -0.42
SMARCD2-203ENST00000448276 NDUFS5O43920 106 aa12.45□□□□□ -0.42
SMARCD2-203ENST00000448276 Q96NJ1 140 aa12.45□□□□□ -0.42
SMARCD2-203ENST00000448276 LOC101927531A0A1B0GV80 90 aa12.44□□□□□ -0.42
SMARCD2-203ENST00000448276 STAB2Q8WWQ8 2551 aa12.42□□□□□ -0.42
SMARCD2-203ENST00000448276 IGHV6-1A0A0B4J1U7 121 aa12.41□□□□□ -0.42
SMARCD2-203ENST00000448276 DNAH7Q8WXX0 4024 aa12.4□□□□□ -0.42
SMARCD2-203ENST00000448276 KTN1-AS1Q86SY8 53 aa12.39□□□□□ -0.43
SMARCD2-203ENST00000448276 C8orf17Q9NRJ1 99 aa12.39□□□□□ -0.43
SMARCD2-203ENST00000448276 ATP11AUNQ6ZP68 121 aa12.38□□□□□ -0.43
SMARCD2-203ENST00000448276 MOBPQ13875 183 aa12.36□□□□□ -0.43
SMARCD2-203ENST00000448276 A0A087X002 238 aa12.36□□□□□ -0.43
SMARCD2-203ENST00000448276 NOTCH2NLQ7Z3S9 236 aa12.36□□□□□ -0.43
SMARCD2-203ENST00000448276 UBE2DNLQ8IWF7 75 aa12.36□□□□□ -0.43
SMARCD2-203ENST00000448276 HRES1P13985 223 aa12.35□□□□□ -0.43
SMARCD2-203ENST00000448276 SPINK7P58062 85 aa12.34□□□□□ -0.43
SMARCD2-203ENST00000448276 ASB16-AS1Q495Z4 193 aa12.34□□□□□ -0.43
SMARCD2-203ENST00000448276 A6NN06 94 aa12.34□□□□□ -0.43
SMARCD2-203ENST00000448276 ANAPC11Q9NYG5 84 aa12.33□□□□□ -0.44
SMARCD2-203ENST00000448276 KRTAP13-1Q8IUC0 172 aa12.33□□□□□ -0.44
SMARCD2-203ENST00000448276 CDC42SE1Q9NRR8 79 aa12.33□□□□□ -0.44
SMARCD2-203ENST00000448276 RBM12B-AS1Q9P1G2 102 aa12.32□□□□□ -0.44
SMARCD2-203ENST00000448276 LINC01558Q9Y6Z2 57 aa12.32□□□□□ -0.44
SMARCD2-203ENST00000448276 TP53AIP1Q9HCN2 124 aa12.32□□□□□ -0.44
SMARCD2-203ENST00000448276 Q6ZR54 194 aa12.31□□□□□ -0.44
SMARCD2-203ENST00000448276 PLAC8Q9NZF1 115 aa12.29□□□□□ -0.44
SMARCD2-203ENST00000448276 A0A1B0GVX0 72 aa12.28□□□□□ -0.44
SMARCD2-203ENST00000448276 C14orf177Q52M58 125 aa12.25□□□□□ -0.45
SMARCD2-203ENST00000448276 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.25□□□□□ -0.45
SMARCD2-203ENST00000448276 FRAS1Q86XX4 4008 aa12.25□□□□□ -0.45
SMARCD2-203ENST00000448276 PRR26Q8N8Z3 221 aa12.25□□□□□ -0.45
SMARCD2-203ENST00000448276 MRPL34Q9BQ48 92 aaKnown RBP12.24□□□□□ -0.45
SMARCD2-203ENST00000448276 MDFIQ99750 246 aa12.23□□□□□ -0.45
SMARCD2-203ENST00000448276 CDK2AP2O75956 126 aa12.22□□□□□ -0.45
SMARCD2-203ENST00000448276 Q5W150 140 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms