RNA–Protein interactions for RNA: ENST00000447376.1

SF3A1-204, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 418 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-204ENST00000447376 LRP2P98164 4655 aa9.42□□□□□ -0.9
SF3A1-204ENST00000447376 A0A1B0GX51 115 aa9.41□□□□□ -0.9
SF3A1-204ENST00000447376 TRIAP1O43715 76 aa9.41□□□□□ -0.9
SF3A1-204ENST00000447376 GHRHP01286 108 aa9.41□□□□□ -0.9
SF3A1-204ENST00000447376 LINC01547P58512 204 aaPredicted RBP9.41□□□□□ -0.9
SF3A1-204ENST00000447376 PPDPFLQ8WWR9 84 aa9.41□□□□□ -0.9
SF3A1-204ENST00000447376 RPS29P62273 56 aaKnown RBP9.4□□□□□ -0.9
SF3A1-204ENST00000447376 OCIAD2Q56VL3 154 aa9.4□□□□□ -0.9
SF3A1-204ENST00000447376 Q8N377 158 aa9.4□□□□□ -0.9
SF3A1-204ENST00000447376 F8WEM9 126 aa9.39□□□□□ -0.91
SF3A1-204ENST00000447376 IGLV7-46A0A075B6I9 117 aa9.38□□□□□ -0.91
SF3A1-204ENST00000447376 FP248Q71RG6 208 aaPredicted RBP9.38□□□□□ -0.91
SF3A1-204ENST00000447376 SMIM29Q86T20 159 aa9.37□□□□□ -0.91
SF3A1-204ENST00000447376 SCGB1C2P0DMR2 95 aa9.36□□□□□ -0.91
SF3A1-204ENST00000447376 FAM218AQ96MZ4 157 aa9.36□□□□□ -0.91
SF3A1-204ENST00000447376 SNHG12Q9BXW3 62 aa9.36□□□□□ -0.91
SF3A1-204ENST00000447376 DNAL4O96015 105 aa9.35□□□□□ -0.91
SF3A1-204ENST00000447376 LIMD2Q9BT23 127 aa9.35□□□□□ -0.91
SF3A1-204ENST00000447376 CLEC2BQ92478 149 aa9.34□□□□□ -0.91
SF3A1-204ENST00000447376 CDIP1Q9H305 208 aa9.33□□□□□ -0.92
SF3A1-204ENST00000447376 H3BQ85 93 aa9.32□□□□□ -0.92
SF3A1-204ENST00000447376 BATFQ16520 125 aa9.32□□□□□ -0.92
SF3A1-204ENST00000447376 TPRXLQ17RH7 258 aa9.32□□□□□ -0.92
SF3A1-204ENST00000447376 CD164Q04900 197 aa9.31□□□□□ -0.92
SF3A1-204ENST00000447376 HRCT1Q6UXD1 115 aa9.31□□□□□ -0.92
SF3A1-204ENST00000447376 LPAP08519 4548 aa9.31□□□□□ -0.92
SF3A1-204ENST00000447376 Q6JHZ5 121 aa9.3□□□□□ -0.92
SF3A1-204ENST00000447376 ORMDL1Q9P0S3 153 aa9.29□□□□□ -0.92
SF3A1-204ENST00000447376 FABP2P12104 132 aa9.28□□□□□ -0.92
SF3A1-204ENST00000447376 IGLV8-61A0A075B6I0 122 aa9.27□□□□□ -0.93
SF3A1-204ENST00000447376 TRACP01848 142 aa9.27□□□□□ -0.93
SF3A1-204ENST00000447376 NDUFV3P56181 108 aaKnown RBP9.26□□□□□ -0.93
SF3A1-204ENST00000447376 LYRM7Q5U5X0 104 aa9.26□□□□□ -0.93
SF3A1-204ENST00000447376 TMEM256-PLSCR3K7ERE1 68 aa9.25□□□□□ -0.93
SF3A1-204ENST00000447376 LST1O00453 97 aa9.25□□□□□ -0.93
SF3A1-204ENST00000447376 RNF213Q63HN8 5207 aa9.22□□□□□ -0.93
SF3A1-204ENST00000447376 ATXN8Q156A1 80 aa9.22□□□□□ -0.93
SF3A1-204ENST00000447376 NAA38Q9BRA0 125 aaKnown RBP9.22□□□□□ -0.93
SF3A1-204ENST00000447376 H3BMG7 143 aa9.21□□□□□ -0.94
SF3A1-204ENST00000447376 IGFL1Q6UW32 110 aa9.21□□□□□ -0.94
SF3A1-204ENST00000447376 A0A0G2JQZ4 141 aa9.2□□□□□ -0.94
SF3A1-204ENST00000447376 H3BUT2 72 aa9.2□□□□□ -0.94
SF3A1-204ENST00000447376 TCL1BO95988 128 aa9.19□□□□□ -0.94
SF3A1-204ENST00000447376 TRBV20-1A0A075B6N2 111 aa9.18□□□□□ -0.94
SF3A1-204ENST00000447376 C9orf118A6NHY6 69 aa9.18□□□□□ -0.94
SF3A1-204ENST00000447376 UBE2V1Q13404 147 aa9.18□□□□□ -0.94
SF3A1-204ENST00000447376 KRTAP13-3Q3SY46 172 aa9.18□□□□□ -0.94
SF3A1-204ENST00000447376 Q5XG85 94 aa9.18□□□□□ -0.94
SF3A1-204ENST00000447376 TRBV7-7A0A0K0K1E9 115 aa9.15□□□□□ -0.94
SF3A1-204ENST00000447376 TAX1BP3O14907 124 aa9.15□□□□□ -0.94
SF3A1-204ENST00000447376 BAALC-AS2P0C853 105 aa9.15□□□□□ -0.94
SF3A1-204ENST00000447376 A0A0U1RQV1 116 aa9.13□□□□□ -0.95
SF3A1-204ENST00000447376 COL5A1-AS1Q5SY13 56 aa9.13□□□□□ -0.95
SF3A1-204ENST00000447376 TEN1Q86WV5 123 aa9.13□□□□□ -0.95
SF3A1-204ENST00000447376 ANKRD29Q8N6D5 301 aa9.13□□□□□ -0.95
SF3A1-204ENST00000447376 A0A1W2PPM0 123 aa9.12□□□□□ -0.95
SF3A1-204ENST00000447376 PCP4L1A6NKN8 68 aa9.12□□□□□ -0.95
SF3A1-204ENST00000447376 Q6Q795 121 aa9.12□□□□□ -0.95
SF3A1-204ENST00000447376 SS18L2Q9UHA2 77 aa9.1□□□□□ -0.95
SF3A1-204ENST00000447376 A0A1B0GV72 72 aa9.09□□□□□ -0.95
SF3A1-204ENST00000447376 SEC61BP60468 96 aaKnown RBP9.09□□□□□ -0.95
SF3A1-204ENST00000447376 RBM3P98179 157 aaKnown RBP9.09□□□□□ -0.95
SF3A1-204ENST00000447376 ASB16-AS1Q495Z4 193 aa9.08□□□□□ -0.96
SF3A1-204ENST00000447376 DSCR8Q96T75 97 aa9.08□□□□□ -0.96
SF3A1-204ENST00000447376 C9JAW5 83 aa9.07□□□□□ -0.96
SF3A1-204ENST00000447376 C1orf195Q5TG92 126 aa9.07□□□□□ -0.96
SF3A1-204ENST00000447376 TRBV7-4A0A0J9YYF1 115 aa9.05□□□□□ -0.96
SF3A1-204ENST00000447376 JMJD7-PLA2G4BH0Y9G9 81 aa9.05□□□□□ -0.96
SF3A1-204ENST00000447376 C9orf92A6NGG3 77 aa9.04□□□□□ -0.96
SF3A1-204ENST00000447376 CCKP06307 115 aa9.04□□□□□ -0.96
SF3A1-204ENST00000447376 A0A087WSZ3 146 aa9.03□□□□□ -0.96
SF3A1-204ENST00000447376 A0A1W2PNM2 257 aa9.03□□□□□ -0.96
SF3A1-204ENST00000447376 XP32Q5T750 250 aa9.03□□□□□ -0.96
SF3A1-204ENST00000447376 SPCS1Q9Y6A9 102 aa9.03□□□□□ -0.96
SF3A1-204ENST00000447376 H3BT86 120 aa9.01□□□□□ -0.97
SF3A1-204ENST00000447376 VPS25Q9BRG1 176 aa9□□□□□ -0.97
SF3A1-204ENST00000447376 PDE6GP18545 87 aa8.99□□□□□ -0.97
SF3A1-204ENST00000447376 C21orf62-AS1Q17RA5 79 aa8.99□□□□□ -0.97
SF3A1-204ENST00000447376 MUC2Q02817 5179 aa8.99□□□□□ -0.97
SF3A1-204ENST00000447376 MUC17Q685J3 4493 aa8.99□□□□□ -0.97
SF3A1-204ENST00000447376 LOC110117498A0A087WWA1 95 aa8.95□□□□□ -0.98
SF3A1-204ENST00000447376 A0A1B0GW54 56 aa8.93□□□□□ -0.98
SF3A1-204ENST00000447376 K7EP34 96 aa8.93□□□□□ -0.98
SF3A1-204ENST00000447376 GTF2H5Q6ZYL4 71 aa8.93□□□□□ -0.98
SF3A1-204ENST00000447376 MTURNQ8N3F0 131 aa8.93□□□□□ -0.98
SF3A1-204ENST00000447376 OBSCN-AS1Q96MR7 158 aa8.93□□□□□ -0.98
SF3A1-204ENST00000447376 Q6ZQT0 140 aa8.92□□□□□ -0.98
SF3A1-204ENST00000447376 C14orf132Q9NPU4 83 aa8.92□□□□□ -0.98
SF3A1-204ENST00000447376 Q96NJ1 140 aa8.88□□□□□ -0.99
SF3A1-204ENST00000447376 SIGMAR1Q99720 223 aa8.88□□□□□ -0.99
SF3A1-204ENST00000447376 PCOTHQ58A44 107 aa8.87□□□□□ -0.99
SF3A1-204ENST00000447376 IGKV4-1P06312 121 aa8.86□□□□□ -0.99
SF3A1-204ENST00000447376 RPL37P61927 97 aaKnown RBP8.85□□□□□ -0.99
SF3A1-204ENST00000447376 LINC00472Q9H8W2 130 aa8.85□□□□□ -0.99
SF3A1-204ENST00000447376 SMCPP49901 116 aaPredicted RBP8.83□□□□□ -1
SF3A1-204ENST00000447376 J3KT08 172 aa8.82□□□□□ -1
SF3A1-204ENST00000447376 PRO0461Q9UI25 63 aa8.82□□□□□ -1
SF3A1-204ENST00000447376 F8W1H4 67 aa8.81□□□□□ -1
SF3A1-204ENST00000447376 DEFB116Q30KQ4 102 aa8.81□□□□□ -1
SF3A1-204ENST00000447376 ATP11AUNQ6ZP68 121 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms