RNA–Protein interactions for RNA: ENST00000445497.1

UBBP3-201, Transcript of ubiquitin B pseudogene 3, humanhuman

BASIC

Gene UBBP3, Length 241 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP3-201ENST00000445497 STATHP02808 62 aa1.08□□□□□ -2.24
UBBP3-201ENST00000445497 KRTAP10-12P60413 245 aa1.08□□□□□ -2.24
UBBP3-201ENST00000445497 SPTBN2O15020 2390 aa1.08□□□□□ -2.24
UBBP3-201ENST00000445497 WNK1Q9H4A3 2382 aa1.08□□□□□ -2.24
UBBP3-201ENST00000445497 HIVEP2P31629 2446 aa1.08□□□□□ -2.24
UBBP3-201ENST00000445497 KRTAP6-3Q3LI67 103 aa1.07□□□□□ -2.24
UBBP3-201ENST00000445497 ABCA2Q9BZC7 2435 aa1.07□□□□□ -2.24
UBBP3-201ENST00000445497 KRTAP10-7P60409 375 aaPredicted RBP1.06□□□□□ -2.24
UBBP3-201ENST00000445497 LCE3CQ5T5A8 94 aa1.06□□□□□ -2.24
UBBP3-201ENST00000445497 Q9Y3F1 56 aa1.06□□□□□ -2.24
UBBP3-201ENST00000445497 SPTBN1Q01082 2364 aaKnown RBP1.06□□□□□ -2.24
UBBP3-201ENST00000445497 HTN1P15515 57 aa1.05□□□□□ -2.24
UBBP3-201ENST00000445497 CSPG4Q6UVK1 2322 aa1.04□□□□□ -2.24
UBBP3-201ENST00000445497 AKAP6Q13023 2319 aa1.04□□□□□ -2.24
UBBP3-201ENST00000445497 MUC6Q6W4X9 2439 aa1.04□□□□□ -2.24
UBBP3-201ENST00000445497 KRTAP1-1Q07627 177 aa1.03□□□□□ -2.24
UBBP3-201ENST00000445497 LCE1EQ5T753 118 aa1.03□□□□□ -2.24
UBBP3-201ENST00000445497 TNP1P09430 55 aa1.01□□□□□ -2.25
UBBP3-201ENST00000445497 SPART-AS1P0CW21 52 aa1.01□□□□□ -2.25
UBBP3-201ENST00000445497 DEFB1P60022 68 aa1.01□□□□□ -2.25
UBBP3-201ENST00000445497 KRTAP10-5P60370 271 aa1.01□□□□□ -2.25
UBBP3-201ENST00000445497 KRTAP5-3Q6L8H2 238 aa1.01□□□□□ -2.25
UBBP3-201ENST00000445497 DEFB108BQ8NET1 73 aa1.01□□□□□ -2.25
UBBP3-201ENST00000445497 SPTA1P02549 2419 aa1.01□□□□□ -2.25
UBBP3-201ENST00000445497 C9orf92A6NGG3 77 aa1□□□□□ -2.25
UBBP3-201ENST00000445497 DEFB135Q30KP9 77 aa1□□□□□ -2.25
UBBP3-201ENST00000445497 PKD1L2Q7Z442 2459 aa0.99□□□□□ -2.25
UBBP3-201ENST00000445497 F8P00451 2351 aa0.99□□□□□ -2.25
UBBP3-201ENST00000445497 KRTAP12-3P60328 96 aa0.99□□□□□ -2.25
UBBP3-201ENST00000445497 DEFB124Q8NES8 71 aa0.99□□□□□ -2.25
UBBP3-201ENST00000445497 NOTCH3Q9UM47 2321 aa0.99□□□□□ -2.25
UBBP3-201ENST00000445497 ABCA12Q86UK0 2595 aa0.99□□□□□ -2.25
UBBP3-201ENST00000445497 DSPP15924 2871 aaKnown RBP0.98□□□□□ -2.25
UBBP3-201ENST00000445497 RP1L1Q8IWN7 2480 aaPredicted RBP0.98□□□□□ -2.25
UBBP3-201ENST00000445497 ACACAQ13085 2346 aa0.98□□□□□ -2.25
UBBP3-201ENST00000445497 MEGF8Q7Z7M0 2845 aa0.97□□□□□ -2.25
UBBP3-201ENST00000445497 H3BNG1 76 aa0.97□□□□□ -2.25
UBBP3-201ENST00000445497 SPINK6Q6UWN8 80 aa0.97□□□□□ -2.25
UBBP3-201ENST00000445497 GVINP1Q7Z2Y8 2422 aa0.96□□□□□ -2.26
UBBP3-201ENST00000445497 M0R2T5 61 aa0.96□□□□□ -2.26
UBBP3-201ENST00000445497 DEFB136Q30KP8 78 aa0.96□□□□□ -2.26
UBBP3-201ENST00000445497 LCE3EQ5T5B0 92 aa0.96□□□□□ -2.26
UBBP3-201ENST00000445497 REV3LO60673 3130 aa0.95□□□□□ -2.26
UBBP3-201ENST00000445497 A0A096LNI7 61 aa0.95□□□□□ -2.26
UBBP3-201ENST00000445497 KRTAP10-4P60372 401 aaPredicted RBP0.95□□□□□ -2.26
UBBP3-201ENST00000445497 DEFB110Q30KQ9 67 aa0.95□□□□□ -2.26
UBBP3-201ENST00000445497 APC2O95996 2303 aa0.95□□□□□ -2.26
UBBP3-201ENST00000445497 CEP290O15078 2479 aa0.95□□□□□ -2.26
UBBP3-201ENST00000445497 CELSR2Q9HCU4 2923 aa0.95□□□□□ -2.26
UBBP3-201ENST00000445497 TTC28Q96AY4 2481 aa0.94□□□□□ -2.26
UBBP3-201ENST00000445497 FBN1P35555 2871 aaKnown RBP0.94□□□□□ -2.26
UBBP3-201ENST00000445497 HECTD1Q9ULT8 2610 aa0.94□□□□□ -2.26
UBBP3-201ENST00000445497 NCOR1O75376 2440 aa0.93□□□□□ -2.26
UBBP3-201ENST00000445497 EP300Q09472 2414 aaPredicted RBP0.93□□□□□ -2.26
UBBP3-201ENST00000445497 LINC01556Q5JQF7 62 aa0.93□□□□□ -2.26
UBBP3-201ENST00000445497 CREBBPQ92793 2442 aa0.93□□□□□ -2.26
UBBP3-201ENST00000445497 CEP250Q9BV73 2442 aa0.92□□□□□ -2.26
UBBP3-201ENST00000445497 DMBT1Q9UGM3 2413 aaPredicted RBP0.92□□□□□ -2.26
UBBP3-201ENST00000445497 TRANK1O15050 2925 aa0.91□□□□□ -2.26
UBBP3-201ENST00000445497 RPS29P62273 56 aaKnown RBP0.91□□□□□ -2.26
UBBP3-201ENST00000445497 LCE3DQ9BYE3 92 aa0.91□□□□□ -2.26
UBBP3-201ENST00000445497 NBASA2RRP1 2371 aa0.91□□□□□ -2.26
UBBP3-201ENST00000445497 KRTAP2-3P0C7H8 128 aa0.9□□□□□ -2.27
UBBP3-201ENST00000445497 KRTAP2-4Q9BYR9 128 aa0.9□□□□□ -2.27
UBBP3-201ENST00000445497 KRTAP2-1Q9BYU5 128 aa0.9□□□□□ -2.27
UBBP3-201ENST00000445497 NAV2Q8IVL1 2488 aa0.9□□□□□ -2.27
UBBP3-201ENST00000445497 ASH1LQ9NR48 2969 aaKnown RBP0.9□□□□□ -2.27
UBBP3-201ENST00000445497 SETD2Q9BYW2 2564 aaPredicted RBP0.88□□□□□ -2.27
UBBP3-201ENST00000445497 SPTBN4Q9H254 2564 aa0.88□□□□□ -2.27
UBBP3-201ENST00000445497 A0A096LPF7 62 aa0.88□□□□□ -2.27
UBBP3-201ENST00000445497 KRTAP9-6A8MVA2 160 aa0.88□□□□□ -2.27
UBBP3-201ENST00000445497 SMR3AQ99954 134 aa0.88□□□□□ -2.27
UBBP3-201ENST00000445497 POLQO75417 2590 aa0.88□□□□□ -2.27
UBBP3-201ENST00000445497 A0A0C4DFX4 3053 aa0.87□□□□□ -2.27
UBBP3-201ENST00000445497 ZNF292O60281 2723 aa0.87□□□□□ -2.27
UBBP3-201ENST00000445497 DEFB133Q30KQ1 61 aa0.87□□□□□ -2.27
UBBP3-201ENST00000445497 COL6A5A8TX70 2615 aa0.87□□□□□ -2.27
UBBP3-201ENST00000445497 PRRC2CQ9Y520 2896 aaKnown RBP0.87□□□□□ -2.27
UBBP3-201ENST00000445497 UBR5O95071 2799 aaPredicted RBP0.86□□□□□ -2.27
UBBP3-201ENST00000445497 MAP1BP46821 2468 aaKnown RBP0.86□□□□□ -2.27
UBBP3-201ENST00000445497 CD52P31358 61 aa0.86□□□□□ -2.27
UBBP3-201ENST00000445497 KRTAP17-1Q9BYP8 105 aa0.86□□□□□ -2.27
UBBP3-201ENST00000445497 U3KQA8 63 aa0.86□□□□□ -2.27
UBBP3-201ENST00000445497 FAM186AA6NE01 2351 aa0.86□□□□□ -2.27
UBBP3-201ENST00000445497 TENM4Q6N022 2769 aa0.85□□□□□ -2.27
UBBP3-201ENST00000445497 CCDC168Q8NDH2 2452 aa0.85□□□□□ -2.27
UBBP3-201ENST00000445497 SRRM2Q9UQ35 2752 aaKnown RBP0.85□□□□□ -2.27
UBBP3-201ENST00000445497 CHD8Q9HCK8 2581 aa0.84□□□□□ -2.27
UBBP3-201ENST00000445497 KRTAP8-1Q8IUC2 63 aa0.84□□□□□ -2.27
UBBP3-201ENST00000445497 EPG5Q9HCE0 2579 aa0.84□□□□□ -2.28
UBBP3-201ENST00000445497 NCOR2Q9Y618 2525 aa0.83□□□□□ -2.28
UBBP3-201ENST00000445497 TENM2Q9NT68 2774 aa0.83□□□□□ -2.28
UBBP3-201ENST00000445497 CHD6Q8TD26 2715 aa0.83□□□□□ -2.28
UBBP3-201ENST00000445497 AKAP13Q12802 2813 aa0.83□□□□□ -2.28
UBBP3-201ENST00000445497 HIVEP3Q5T1R4 2406 aa0.83□□□□□ -2.28
UBBP3-201ENST00000445497 ATRQ13535 2644 aa0.82□□□□□ -2.28
UBBP3-201ENST00000445497 CHD7Q9P2D1 2997 aa0.81□□□□□ -2.28
UBBP3-201ENST00000445497 RIF1Q5UIP0 2472 aaKnown RBP0.81□□□□□ -2.28
UBBP3-201ENST00000445497 KRTAP5-11Q6L8G4 156 aa0.81□□□□□ -2.28
UBBP3-201ENST00000445497 PIEZO1Q92508 2521 aa0.81□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms