RNA–Protein interactions for RNA: ENST00000440421.2

LTBR-202, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 729 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-202ENST00000440421 MUC17Q685J3 4493 aa7.59□□□□□ -1.19
LTBR-202ENST00000440421 A0A0B4J2C4 111 aa7.59□□□□□ -1.19
LTBR-202ENST00000440421 PYY3Q5JQD4 70 aa7.59□□□□□ -1.19
LTBR-202ENST00000440421 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.59□□□□□ -1.19
LTBR-202ENST00000440421 CEND1Q8N111 149 aa7.59□□□□□ -1.19
LTBR-202ENST00000440421 ASB16-AS1Q495Z4 193 aa7.58□□□□□ -1.2
LTBR-202ENST00000440421 XP32Q5T750 250 aa7.57□□□□□ -1.2
LTBR-202ENST00000440421 C9orf92A6NGG3 77 aa7.56□□□□□ -1.2
LTBR-202ENST00000440421 SEC61BP60468 96 aaKnown RBP7.56□□□□□ -1.2
LTBR-202ENST00000440421 Q5XG85 94 aa7.56□□□□□ -1.2
LTBR-202ENST00000440421 TMEM238LA0A1B0GVL6 79 aa7.55□□□□□ -1.2
LTBR-202ENST00000440421 A6NJY4 79 aa7.55□□□□□ -1.2
LTBR-202ENST00000440421 FXYD2P54710 66 aa7.55□□□□□ -1.2
LTBR-202ENST00000440421 C1orf195Q5TG92 126 aa7.55□□□□□ -1.2
LTBR-202ENST00000440421 OCIAD2Q56VL3 154 aa7.54□□□□□ -1.2
LTBR-202ENST00000440421 IGFL1Q6UW32 110 aa7.54□□□□□ -1.2
LTBR-202ENST00000440421 FAM218AQ96MZ4 157 aa7.54□□□□□ -1.2
LTBR-202ENST00000440421 SNHG12Q9BXW3 62 aa7.54□□□□□ -1.2
LTBR-202ENST00000440421 PRO1854Q9UHT4 67 aa7.54□□□□□ -1.2
LTBR-202ENST00000440421 IGLV8-61A0A075B6I0 122 aa7.53□□□□□ -1.2
LTBR-202ENST00000440421 H0YGX0 51 aa7.53□□□□□ -1.2
LTBR-202ENST00000440421 Q6JHZ5 121 aa7.53□□□□□ -1.2
LTBR-202ENST00000440421 PPDPFLQ8WWR9 84 aa7.53□□□□□ -1.2
LTBR-202ENST00000440421 SNCGO76070 127 aa7.52□□□□□ -1.21
LTBR-202ENST00000440421 TCL1BO95988 128 aa7.52□□□□□ -1.21
LTBR-202ENST00000440421 CLEC2BQ92478 149 aa7.52□□□□□ -1.21
LTBR-202ENST00000440421 KRTAP4-1Q9BYQ7 146 aa7.52□□□□□ -1.21
LTBR-202ENST00000440421 H3BUT2 72 aa7.51□□□□□ -1.21
LTBR-202ENST00000440421 HSD52Q0P140 79 aa7.5□□□□□ -1.21
LTBR-202ENST00000440421 TRBV7-7A0A0K0K1E9 115 aa7.49□□□□□ -1.21
LTBR-202ENST00000440421 K7ERJ3 54 aa7.48□□□□□ -1.21
LTBR-202ENST00000440421 TRIAP1O43715 76 aa7.48□□□□□ -1.21
LTBR-202ENST00000440421 UQCR10Q9UDW1 63 aa7.47□□□□□ -1.21
LTBR-202ENST00000440421 NDUFV3P56181 108 aaKnown RBP7.46□□□□□ -1.22
LTBR-202ENST00000440421 FAT4Q6V0I7 4981 aa7.46□□□□□ -1.22
LTBR-202ENST00000440421 PSMB2P49721 201 aa7.45□□□□□ -1.22
LTBR-202ENST00000440421 PCOTHQ58A44 107 aa7.45□□□□□ -1.22
LTBR-202ENST00000440421 LCE2AQ5TA79 106 aaPredicted RBP7.45□□□□□ -1.22
LTBR-202ENST00000440421 A0A1B0GX51 115 aa7.44□□□□□ -1.22
LTBR-202ENST00000440421 FABP2P12104 132 aa7.44□□□□□ -1.22
LTBR-202ENST00000440421 H3BMG7 143 aa7.41□□□□□ -1.22
LTBR-202ENST00000440421 GHRHP01286 108 aa7.41□□□□□ -1.22
LTBR-202ENST00000440421 DNAL4O96015 105 aa7.4□□□□□ -1.22
LTBR-202ENST00000440421 LST1O00453 97 aa7.39□□□□□ -1.23
LTBR-202ENST00000440421 COX6CP09669 75 aa7.39□□□□□ -1.23
LTBR-202ENST00000440421 TEN1Q86WV5 123 aa7.39□□□□□ -1.23
LTBR-202ENST00000440421 RPL37P61927 97 aaKnown RBP7.38□□□□□ -1.23
LTBR-202ENST00000440421 Q6Q795 121 aa7.38□□□□□ -1.23
LTBR-202ENST00000440421 ORMDL1Q9P0S3 153 aa7.38□□□□□ -1.23
LTBR-202ENST00000440421 A0A1B0GV72 72 aa7.37□□□□□ -1.23
LTBR-202ENST00000440421 SS18L2Q9UHA2 77 aa7.37□□□□□ -1.23
LTBR-202ENST00000440421 A0A087WSZ3 146 aa7.36□□□□□ -1.23
LTBR-202ENST00000440421 OBSCN-AS1Q96MR7 158 aa7.35□□□□□ -1.23
LTBR-202ENST00000440421 SCGB1C2P0DMR2 95 aa7.34□□□□□ -1.23
LTBR-202ENST00000440421 A0A1W2PNM2 257 aa7.33□□□□□ -1.24
LTBR-202ENST00000440421 ANKRD29Q8N6D5 301 aa7.33□□□□□ -1.24
LTBR-202ENST00000440421 H3BQ85 93 aa7.32□□□□□ -1.24
LTBR-202ENST00000440421 TMEM256-PLSCR3K7ERE1 68 aa7.32□□□□□ -1.24
LTBR-202ENST00000440421 TRACP01848 142 aa7.3□□□□□ -1.24
LTBR-202ENST00000440421 LCE2CQ5TA81 110 aa7.29□□□□□ -1.24
LTBR-202ENST00000440421 Q96NJ1 140 aa7.29□□□□□ -1.24
LTBR-202ENST00000440421 M0R143 59 aa7.28□□□□□ -1.24
LTBR-202ENST00000440421 SMIM6P0DI80 62 aa7.28□□□□□ -1.24
LTBR-202ENST00000440421 UBE2V1Q13404 147 aa7.28□□□□□ -1.24
LTBR-202ENST00000440421 KRTAP19-2Q3LHN2 52 aa7.28□□□□□ -1.24
LTBR-202ENST00000440421 TRBV7-4A0A0J9YYF1 115 aa7.27□□□□□ -1.25
LTBR-202ENST00000440421 NAA38Q9BRA0 125 aaKnown RBP7.27□□□□□ -1.25
LTBR-202ENST00000440421 CCKP06307 115 aa7.26□□□□□ -1.25
LTBR-202ENST00000440421 Q75L30 129 aa7.26□□□□□ -1.25
LTBR-202ENST00000440421 SIGMAR1Q99720 223 aa7.26□□□□□ -1.25
LTBR-202ENST00000440421 ATP11AUNQ6ZP68 121 aa7.25□□□□□ -1.25
LTBR-202ENST00000440421 DSCR10P59022 87 aa7.24□□□□□ -1.25
LTBR-202ENST00000440421 KRTAP9-2Q9BYQ4 174 aa7.24□□□□□ -1.25
LTBR-202ENST00000440421 IGKV4-1P06312 121 aa7.23□□□□□ -1.25
LTBR-202ENST00000440421 BAALC-AS2P0C853 105 aa7.23□□□□□ -1.25
LTBR-202ENST00000440421 VPS25Q9BRG1 176 aa7.23□□□□□ -1.25
LTBR-202ENST00000440421 RBM3P98179 157 aaKnown RBP7.22□□□□□ -1.25
LTBR-202ENST00000440421 DEFB116Q30KQ4 102 aa7.22□□□□□ -1.25
LTBR-202ENST00000440421 DSCR8Q96T75 97 aa7.21□□□□□ -1.26
LTBR-202ENST00000440421 MT1HP80294 61 aa7.2□□□□□ -1.26
LTBR-202ENST00000440421 ATXN8Q156A1 80 aa7.2□□□□□ -1.26
LTBR-202ENST00000440421 TSTD3H0UI37 97 aa7.19□□□□□ -1.26
LTBR-202ENST00000440421 BATFQ16520 125 aa7.19□□□□□ -1.26
LTBR-202ENST00000440421 COX6B2Q6YFQ2 88 aa7.19□□□□□ -1.26
LTBR-202ENST00000440421 C20orf166-AS1Q96NR2 134 aa7.19□□□□□ -1.26
LTBR-202ENST00000440421 A8MUU9 505 aa7.18□□□□□ -1.26
LTBR-202ENST00000440421 LINC00472Q9H8W2 130 aa7.18□□□□□ -1.26
LTBR-202ENST00000440421 C9JAW5 83 aa7.17□□□□□ -1.26
LTBR-202ENST00000440421 LINC00313P59037 77 aa7.17□□□□□ -1.26
LTBR-202ENST00000440421 LOC105371267A0A1B0GV96 52 aa7.16□□□□□ -1.26
LTBR-202ENST00000440421 IGHV6-1A0A0B4J1U7 121 aa7.14□□□□□ -1.27
LTBR-202ENST00000440421 NOTCH2NLQ7Z3S9 236 aa7.14□□□□□ -1.27
LTBR-202ENST00000440421 KRTAP16-1A8MUX0 517 aa7.13□□□□□ -1.27
LTBR-202ENST00000440421 JMJD7-PLA2G4BH0Y9G9 81 aa7.12□□□□□ -1.27
LTBR-202ENST00000440421 LYRM7Q5U5X0 104 aa7.12□□□□□ -1.27
LTBR-202ENST00000440421 M0R2T5 61 aa7.1□□□□□ -1.27
LTBR-202ENST00000440421 Q6ZQT0 140 aa7.1□□□□□ -1.27
LTBR-202ENST00000440421 TRBV20-1A0A075B6N2 111 aa7.09□□□□□ -1.27
LTBR-202ENST00000440421 C14orf132Q9NPU4 83 aa7.09□□□□□ -1.27
LTBR-202ENST00000440421 LOC110117498A0A087WWA1 95 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms