RNA–Protein interactions for RNA: ENST00000439475.1

MCF2L-216, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-216ENST00000439475 CEND1Q8N111 149 aa5.89□□□□□ -1.47
MCF2L-216ENST00000439475 PPDPFLQ8WWR9 84 aa5.88□□□□□ -1.47
MCF2L-216ENST00000439475 GHRHP01286 108 aa5.87□□□□□ -1.47
MCF2L-216ENST00000439475 KRTAP13-3Q3SY46 172 aa5.87□□□□□ -1.47
MCF2L-216ENST00000439475 PYY3Q5JQD4 70 aa5.87□□□□□ -1.47
MCF2L-216ENST00000439475 C2orf91Q6ZV80 131 aa5.87□□□□□ -1.47
MCF2L-216ENST00000439475 SNHG12Q9BXW3 62 aa5.87□□□□□ -1.47
MCF2L-216ENST00000439475 TMA7Q9Y2S6 64 aaKnown RBP5.87□□□□□ -1.47
MCF2L-216ENST00000439475 OCIAD2Q56VL3 154 aa5.86□□□□□ -1.47
MCF2L-216ENST00000439475 Q6JHZ5 121 aa5.86□□□□□ -1.47
MCF2L-216ENST00000439475 PRO1854Q9UHT4 67 aa5.86□□□□□ -1.47
MCF2L-216ENST00000439475 TCL1BO95988 128 aa5.85□□□□□ -1.47
MCF2L-216ENST00000439475 Q5XG85 94 aa5.85□□□□□ -1.47
MCF2L-216ENST00000439475 A0A1B0GX51 115 aa5.83□□□□□ -1.48
MCF2L-216ENST00000439475 SEC61BP60468 96 aaKnown RBP5.83□□□□□ -1.48
MCF2L-216ENST00000439475 HSD52Q0P140 79 aa5.83□□□□□ -1.48
MCF2L-216ENST00000439475 UQCR10Q9UDW1 63 aa5.83□□□□□ -1.48
MCF2L-216ENST00000439475 FXYD2P54710 66 aa5.82□□□□□ -1.48
MCF2L-216ENST00000439475 IGLV8-61A0A075B6I0 122 aa5.81□□□□□ -1.48
MCF2L-216ENST00000439475 COX6CP09669 75 aa5.81□□□□□ -1.48
MCF2L-216ENST00000439475 CLEC2BQ92478 149 aa5.81□□□□□ -1.48
MCF2L-216ENST00000439475 RNF213Q63HN8 5207 aa5.81□□□□□ -1.48
MCF2L-216ENST00000439475 MUC17Q685J3 4493 aa5.81□□□□□ -1.48
MCF2L-216ENST00000439475 A0A0G2JQZ4 141 aa5.8□□□□□ -1.48
MCF2L-216ENST00000439475 ASB16-AS1Q495Z4 193 aa5.8□□□□□ -1.48
MCF2L-216ENST00000439475 PSMB2P49721 201 aa5.79□□□□□ -1.48
MCF2L-216ENST00000439475 IGFL1Q6UW32 110 aa5.79□□□□□ -1.48
MCF2L-216ENST00000439475 H3BQ85 93 aa5.78□□□□□ -1.48
MCF2L-216ENST00000439475 DNAL4O96015 105 aa5.78□□□□□ -1.48
MCF2L-216ENST00000439475 XP32Q5T750 250 aa5.78□□□□□ -1.48
MCF2L-216ENST00000439475 C1orf195Q5TG92 126 aa5.78□□□□□ -1.48
MCF2L-216ENST00000439475 TRBV7-7A0A0K0K1E9 115 aa5.77□□□□□ -1.49
MCF2L-216ENST00000439475 FABP2P12104 132 aa5.77□□□□□ -1.49
MCF2L-216ENST00000439475 NDUFV3P56181 108 aaKnown RBP5.77□□□□□ -1.49
MCF2L-216ENST00000439475 FAM218AQ96MZ4 157 aa5.77□□□□□ -1.49
MCF2L-216ENST00000439475 C9orf92A6NGG3 77 aa5.76□□□□□ -1.49
MCF2L-216ENST00000439475 TRIAP1O43715 76 aa5.76□□□□□ -1.49
MCF2L-216ENST00000439475 H3BMG7 143 aa5.74□□□□□ -1.49
MCF2L-216ENST00000439475 H3BUT2 72 aa5.74□□□□□ -1.49
MCF2L-216ENST00000439475 SCGB1C2P0DMR2 95 aa5.74□□□□□ -1.49
MCF2L-216ENST00000439475 ORMDL1Q9P0S3 153 aa5.74□□□□□ -1.49
MCF2L-216ENST00000439475 SS18L2Q9UHA2 77 aa5.74□□□□□ -1.49
MCF2L-216ENST00000439475 TMEM256-PLSCR3K7ERE1 68 aa5.73□□□□□ -1.49
MCF2L-216ENST00000439475 LST1O00453 97 aa5.73□□□□□ -1.49
MCF2L-216ENST00000439475 TEN1Q86WV5 123 aa5.73□□□□□ -1.49
MCF2L-216ENST00000439475 K7ERJ3 54 aa5.72□□□□□ -1.49
MCF2L-216ENST00000439475 Q6Q795 121 aa5.72□□□□□ -1.49
MCF2L-216ENST00000439475 M0R143 59 aa5.7□□□□□ -1.5
MCF2L-216ENST00000439475 ANKRD29Q8N6D5 301 aa5.7□□□□□ -1.5
MCF2L-216ENST00000439475 TRACP01848 142 aa5.68□□□□□ -1.5
MCF2L-216ENST00000439475 SMIM6P0DI80 62 aa5.68□□□□□ -1.5
MCF2L-216ENST00000439475 PCOTHQ58A44 107 aa5.68□□□□□ -1.5
MCF2L-216ENST00000439475 A0A087WSZ3 146 aa5.67□□□□□ -1.5
MCF2L-216ENST00000439475 UBE2V1Q13404 147 aa5.67□□□□□ -1.5
MCF2L-216ENST00000439475 MUC2Q02817 5179 aa5.66□□□□□ -1.5
MCF2L-216ENST00000439475 RPL37P61927 97 aaKnown RBP5.66□□□□□ -1.5
MCF2L-216ENST00000439475 TRBV7-4A0A0J9YYF1 115 aa5.64□□□□□ -1.51
MCF2L-216ENST00000439475 TSTD3H0UI37 97 aa5.64□□□□□ -1.51
MCF2L-216ENST00000439475 KRTAP4-1Q9BYQ7 146 aa5.64□□□□□ -1.51
MCF2L-216ENST00000439475 A0A1W2PNM2 257 aa5.63□□□□□ -1.51
MCF2L-216ENST00000439475 RBM3P98179 157 aaKnown RBP5.63□□□□□ -1.51
MCF2L-216ENST00000439475 DSCR8Q96T75 97 aa5.63□□□□□ -1.51
MCF2L-216ENST00000439475 A0A1B0GV72 72 aa5.62□□□□□ -1.51
MCF2L-216ENST00000439475 BAALC-AS2P0C853 105 aa5.62□□□□□ -1.51
MCF2L-216ENST00000439475 ATXN8Q156A1 80 aa5.62□□□□□ -1.51
MCF2L-216ENST00000439475 ATP11AUNQ6ZP68 121 aa5.62□□□□□ -1.51
MCF2L-216ENST00000439475 OBSCN-AS1Q96MR7 158 aa5.62□□□□□ -1.51
MCF2L-216ENST00000439475 CCKP06307 115 aa5.61□□□□□ -1.51
MCF2L-216ENST00000439475 LCE2AQ5TA79 106 aaPredicted RBP5.61□□□□□ -1.51
MCF2L-216ENST00000439475 LYRM7Q5U5X0 104 aa5.61□□□□□ -1.51
MCF2L-216ENST00000439475 Q96NJ1 140 aa5.61□□□□□ -1.51
MCF2L-216ENST00000439475 C21orf62-AS1Q17RA5 79 aa5.6□□□□□ -1.51
MCF2L-216ENST00000439475 Q75L30 129 aa5.6□□□□□ -1.51
MCF2L-216ENST00000439475 SIGMAR1Q99720 223 aa5.59□□□□□ -1.51
MCF2L-216ENST00000439475 VPS25Q9BRG1 176 aa5.59□□□□□ -1.51
MCF2L-216ENST00000439475 C9JAW5 83 aa5.58□□□□□ -1.52
MCF2L-216ENST00000439475 JMJD7-PLA2G4BH0Y9G9 81 aa5.58□□□□□ -1.52
MCF2L-216ENST00000439475 IGKV4-1P06312 121 aa5.58□□□□□ -1.52
MCF2L-216ENST00000439475 FAT4Q6V0I7 4981 aa5.57□□□□□ -1.52
MCF2L-216ENST00000439475 TRBV20-1A0A075B6N2 111 aa5.57□□□□□ -1.52
MCF2L-216ENST00000439475 BATFQ16520 125 aa5.57□□□□□ -1.52
MCF2L-216ENST00000439475 LOC105371267A0A1B0GV96 52 aa5.56□□□□□ -1.52
MCF2L-216ENST00000439475 LINC00313P59037 77 aa5.56□□□□□ -1.52
MCF2L-216ENST00000439475 NAA38Q9BRA0 125 aaKnown RBP5.56□□□□□ -1.52
MCF2L-216ENST00000439475 PDE6GP18545 87 aa5.54□□□□□ -1.52
MCF2L-216ENST00000439475 C20orf166-AS1Q96NR2 134 aa5.54□□□□□ -1.52
MCF2L-216ENST00000439475 LINC00472Q9H8W2 130 aa5.54□□□□□ -1.52
MCF2L-216ENST00000439475 A0A1B0GW54 56 aa5.53□□□□□ -1.52
MCF2L-216ENST00000439475 DSCR10P59022 87 aa5.53□□□□□ -1.52
MCF2L-216ENST00000439475 A8MUU9 505 aa5.52□□□□□ -1.53
MCF2L-216ENST00000439475 J3KT08 172 aa5.52□□□□□ -1.53
MCF2L-216ENST00000439475 DEFB116Q30KQ4 102 aa5.52□□□□□ -1.53
MCF2L-216ENST00000439475 C9orf118A6NHY6 69 aa5.51□□□□□ -1.53
MCF2L-216ENST00000439475 COX6B2Q6YFQ2 88 aa5.51□□□□□ -1.53
MCF2L-216ENST00000439475 C8orf87E5RJ46 101 aa5.5□□□□□ -1.53
MCF2L-216ENST00000439475 NDUFB1O75438 58 aa5.5□□□□□ -1.53
MCF2L-216ENST00000439475 Q6ZQT0 140 aa5.5□□□□□ -1.53
MCF2L-216ENST00000439475 LOC110117498A0A087WWA1 95 aa5.49□□□□□ -1.53
MCF2L-216ENST00000439475 IGHV6-1A0A0B4J1U7 121 aa5.49□□□□□ -1.53
MCF2L-216ENST00000439475 LCE2CQ5TA81 110 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 220.9 ms