RNA–Protein interactions for RNA: ENST00000438796.6

LRCH3-206, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

APPRIS P5 TSL 2 BASIC

Gene LRCH3, Length 7,394 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-206ENST00000438796 H1FX-AS1Q4G0G2 97 aa8.29□□□□□ -1.08
LRCH3-206ENST00000438796 CFAP54Q96N23 3096 aa8.29□□□□□ -1.08
LRCH3-206ENST00000438796 ADM2Q7Z4H4 148 aa8.28□□□□□ -1.08
LRCH3-206ENST00000438796 ITPR3Q14573 2671 aa8.26□□□□□ -1.09
LRCH3-206ENST00000438796 FLNAP21333 2647 aaKnown RBP8.26□□□□□ -1.09
LRCH3-206ENST00000438796 LCE6AA0A183 80 aa8.26□□□□□ -1.09
LRCH3-206ENST00000438796 FLNBO75369 2602 aaKnown RBP8.25□□□□□ -1.09
LRCH3-206ENST00000438796 MKI67P46013 3256 aaKnown RBP8.25□□□□□ -1.09
LRCH3-206ENST00000438796 XIRP2A4UGR9 3374 aa8.25□□□□□ -1.09
LRCH3-206ENST00000438796 LINC01558Q9Y6Z2 57 aa8.24□□□□□ -1.09
LRCH3-206ENST00000438796 A0A0A0MQY5 61 aa8.23□□□□□ -1.09
LRCH3-206ENST00000438796 SPATA8Q6RVD6 105 aa8.22□□□□□ -1.09
LRCH3-206ENST00000438796 LINC00472Q9H8W2 130 aa8.21□□□□□ -1.1
LRCH3-206ENST00000438796 ROMO1P60602 79 aa8.19□□□□□ -1.1
LRCH3-206ENST00000438796 SPRR1AP35321 89 aa8.18□□□□□ -1.1
LRCH3-206ENST00000438796 RPL37P61927 97 aaKnown RBP8.18□□□□□ -1.1
LRCH3-206ENST00000438796 CYSTM1Q9H1C7 97 aa8.18□□□□□ -1.1
LRCH3-206ENST00000438796 ATRQ13535 2644 aa8.17□□□□□ -1.1
LRCH3-206ENST00000438796 Q5VV11 94 aa8.17□□□□□ -1.1
LRCH3-206ENST00000438796 KRTAP26-1Q6PEX3 210 aa8.17□□□□□ -1.1
LRCH3-206ENST00000438796 CFAP46Q8IYW2 2715 aa8.16□□□□□ -1.1
LRCH3-206ENST00000438796 H3BS24 57 aa8.15□□□□□ -1.1
LRCH3-206ENST00000438796 PANO1I0J062 215 aa8.13□□□□□ -1.11
LRCH3-206ENST00000438796 OXTP01178 125 aa8.12□□□□□ -1.11
LRCH3-206ENST00000438796 A0A0C4DFX4 3053 aa8.12□□□□□ -1.11
LRCH3-206ENST00000438796 FP248Q71RG6 208 aaPredicted RBP8.12□□□□□ -1.11
LRCH3-206ENST00000438796 MAST4O15021 2626 aa8.12□□□□□ -1.11
LRCH3-206ENST00000438796 AKAP13Q12802 2813 aa8.11□□□□□ -1.11
LRCH3-206ENST00000438796 Q6ZR54 194 aa8.11□□□□□ -1.11
LRCH3-206ENST00000438796 HELZ2Q9BYK8 2649 aaKnown RBP8.1□□□□□ -1.11
LRCH3-206ENST00000438796 CELSR3Q9NYQ7 3312 aa8.09□□□□□ -1.11
LRCH3-206ENST00000438796 A0A087X002 238 aa8.09□□□□□ -1.11
LRCH3-206ENST00000438796 Q5XG85 94 aa8.08□□□□□ -1.12
LRCH3-206ENST00000438796 SPRR1BP22528 89 aa8.07□□□□□ -1.12
LRCH3-206ENST00000438796 LAMA2P24043 3122 aaKnown RBP8.06□□□□□ -1.12
LRCH3-206ENST00000438796 CHD7Q9P2D1 2997 aa8.04□□□□□ -1.12
LRCH3-206ENST00000438796 TRIOO75962 3097 aa8.03□□□□□ -1.12
LRCH3-206ENST00000438796 CHD6Q8TD26 2715 aa8.01□□□□□ -1.13
LRCH3-206ENST00000438796 TEX15Q9BXT5 2789 aa8.01□□□□□ -1.13
LRCH3-206ENST00000438796 C20orf166-AS1Q96NR2 134 aa7.99□□□□□ -1.13
LRCH3-206ENST00000438796 FREM2Q5SZK8 3169 aa7.98□□□□□ -1.13
LRCH3-206ENST00000438796 BRCA2P51587 3418 aa7.98□□□□□ -1.13
LRCH3-206ENST00000438796 LAMA3Q16787 3333 aa7.97□□□□□ -1.13
LRCH3-206ENST00000438796 NOTCH2NLQ7Z3S9 236 aa7.96□□□□□ -1.13
LRCH3-206ENST00000438796 MGAQ8IWI9 3026 aa7.96□□□□□ -1.14
LRCH3-206ENST00000438796 PRUNE2Q8WUY3 3088 aa7.96□□□□□ -1.14
LRCH3-206ENST00000438796 A8MUU9 505 aa7.95□□□□□ -1.14
LRCH3-206ENST00000438796 NBEAL1Q6ZS30 2694 aa7.94□□□□□ -1.14
LRCH3-206ENST00000438796 A8MU10 97 aa7.92□□□□□ -1.14
LRCH3-206ENST00000438796 DMBT1Q9UGM3 2413 aaPredicted RBP7.92□□□□□ -1.14
LRCH3-206ENST00000438796 STAB1Q9NY15 2570 aa7.92□□□□□ -1.14
LRCH3-206ENST00000438796 UNC80Q8N2C7 3258 aa7.89□□□□□ -1.15
LRCH3-206ENST00000438796 DNAH14Q0VDD8 3507 aa7.88□□□□□ -1.15
LRCH3-206ENST00000438796 KRTAP11-1Q8IUC1 163 aa7.87□□□□□ -1.15
LRCH3-206ENST00000438796 CENPEQ02224 2701 aa7.87□□□□□ -1.15
LRCH3-206ENST00000438796 WDFY4Q6ZS81 3184 aa7.85□□□□□ -1.15
LRCH3-206ENST00000438796 CDH23Q9H251 3354 aa7.83□□□□□ -1.16
LRCH3-206ENST00000438796 REV3LO60673 3130 aa7.83□□□□□ -1.16
LRCH3-206ENST00000438796 TEP1Q99973 2627 aaKnown RBP7.83□□□□□ -1.16
LRCH3-206ENST00000438796 RANBP2P49792 3224 aaKnown RBP7.82□□□□□ -1.16
LRCH3-206ENST00000438796 KRTAP4-16G5E9R7 235 aaPredicted RBP7.82□□□□□ -1.16
LRCH3-206ENST00000438796 FRYQ5TBA9 3013 aa7.79□□□□□ -1.16
LRCH3-206ENST00000438796 VPS13AQ96RL7 3174 aa7.78□□□□□ -1.16
LRCH3-206ENST00000438796 UNC79Q9P2D8 2635 aa7.78□□□□□ -1.16
LRCH3-206ENST00000438796 KRTAP29-1A8MX34 341 aaPredicted RBP7.76□□□□□ -1.17
LRCH3-206ENST00000438796 COL6A5A8TX70 2615 aa7.76□□□□□ -1.17
LRCH3-206ENST00000438796 COL6A3P12111 3177 aa7.74□□□□□ -1.17
LRCH3-206ENST00000438796 A0A1B0GVY2 172 aa7.74□□□□□ -1.17
LRCH3-206ENST00000438796 SZT2Q5T011 3432 aa7.73□□□□□ -1.17
LRCH3-206ENST00000438796 C10orf95Q9H7T3 257 aa7.73□□□□□ -1.17
LRCH3-206ENST00000438796 HTTP42858 3142 aa7.72□□□□□ -1.17
LRCH3-206ENST00000438796 CRYBG3Q68DQ2 2970 aa7.71□□□□□ -1.17
LRCH3-206ENST00000438796 GCN1Q92616 2671 aaKnown RBP7.71□□□□□ -1.17
LRCH3-206ENST00000438796 KRTAP13-2Q52LG2 175 aa7.71□□□□□ -1.18
LRCH3-206ENST00000438796 SETXQ7Z333 2677 aaKnown RBP7.7□□□□□ -1.18
LRCH3-206ENST00000438796 KRTAP16-1A8MUX0 517 aa7.69□□□□□ -1.18
LRCH3-206ENST00000438796 KRTAP25-1Q3LHN0 102 aa7.68□□□□□ -1.18
LRCH3-206ENST00000438796 Q6ZRN7 208 aaPredicted RBP7.67□□□□□ -1.18
LRCH3-206ENST00000438796 TNP1P09430 55 aa7.67□□□□□ -1.18
LRCH3-206ENST00000438796 NBEAL2Q6ZNJ1 2754 aa7.67□□□□□ -1.18
LRCH3-206ENST00000438796 STAB2Q8WWQ8 2551 aa7.65□□□□□ -1.18
LRCH3-206ENST00000438796 BAHCC1Q9P281 2608 aa7.63□□□□□ -1.19
LRCH3-206ENST00000438796 KRTAP10-8P60410 259 aa7.63□□□□□ -1.19
LRCH3-206ENST00000438796 CFAP47Q6ZTR5 3102 aa7.63□□□□□ -1.19
LRCH3-206ENST00000438796 RPS29P62273 56 aaKnown RBP7.63□□□□□ -1.19
LRCH3-206ENST00000438796 KRTAP7-1Q8IUC3 87 aa7.62□□□□□ -1.19
LRCH3-206ENST00000438796 ASB16-AS1Q495Z4 193 aa7.62□□□□□ -1.19
LRCH3-206ENST00000438796 NDUFAF8A1L188 74 aa7.62□□□□□ -1.19
LRCH3-206ENST00000438796 CHD9Q3L8U1 2897 aa7.61□□□□□ -1.19
LRCH3-206ENST00000438796 ITPR2Q14571 2701 aa7.61□□□□□ -1.19
LRCH3-206ENST00000438796 SPEGQ15772 3267 aa7.6□□□□□ -1.19
LRCH3-206ENST00000438796 KALRNO60229 2985 aa7.59□□□□□ -1.19
LRCH3-206ENST00000438796 NOTCH1P46531 2555 aa7.58□□□□□ -1.2
LRCH3-206ENST00000438796 MAP1AP78559 2803 aaPredicted RBP7.55□□□□□ -1.2
LRCH3-206ENST00000438796 VCANP13611 3396 aa7.54□□□□□ -1.2
LRCH3-206ENST00000438796 ZNF292O60281 2723 aa7.52□□□□□ -1.21
LRCH3-206ENST00000438796 DSPP15924 2871 aaKnown RBP7.5□□□□□ -1.21
LRCH3-206ENST00000438796 LAMA1P25391 3075 aa7.5□□□□□ -1.21
LRCH3-206ENST00000438796 LRBAP50851 2863 aa7.49□□□□□ -1.21
LRCH3-206ENST00000438796 A6NN06 94 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms