RNA–Protein interactions for RNA: ENST00000437974.5

ARHGEF28-204, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ARHGEF28, Length 5,792 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-204ENST00000437974 SPRR1BP22528 89 aa11.1□□□□□ -0.63
ARHGEF28-204ENST00000437974 LINC00483Q53H64 154 aa11.1□□□□□ -0.63
ARHGEF28-204ENST00000437974 Q8N9P0 234 aaPredicted RBP11.09□□□□□ -0.63
ARHGEF28-204ENST00000437974 STAB1Q9NY15 2570 aa11.08□□□□□ -0.64
ARHGEF28-204ENST00000437974 KRTAP10-1P60331 282 aa11.07□□□□□ -0.64
ARHGEF28-204ENST00000437974 SPINK7P58062 85 aa11.05□□□□□ -0.64
ARHGEF28-204ENST00000437974 Q5XG85 94 aa11.04□□□□□ -0.64
ARHGEF28-204ENST00000437974 Q75L30 129 aa11.04□□□□□ -0.64
ARHGEF28-204ENST00000437974 Q5W150 140 aa11.03□□□□□ -0.64
ARHGEF28-204ENST00000437974 MKI67P46013 3256 aaKnown RBP11.03□□□□□ -0.64
ARHGEF28-204ENST00000437974 KRTAP10-2P60368 255 aa11.03□□□□□ -0.64
ARHGEF28-204ENST00000437974 DMAC1Q96GE9 116 aa11.01□□□□□ -0.65
ARHGEF28-204ENST00000437974 LINC00472Q9H8W2 130 aa11.01□□□□□ -0.65
ARHGEF28-204ENST00000437974 KRTAP26-1Q6PEX3 210 aa10.99□□□□□ -0.65
ARHGEF28-204ENST00000437974 R4GN34 69 aa10.98□□□□□ -0.65
ARHGEF28-204ENST00000437974 FP248Q71RG6 208 aaPredicted RBP10.97□□□□□ -0.65
ARHGEF28-204ENST00000437974 CFAP54Q96N23 3096 aa10.97□□□□□ -0.65
ARHGEF28-204ENST00000437974 LINC01558Q9Y6Z2 57 aa10.97□□□□□ -0.65
ARHGEF28-204ENST00000437974 RANBP2P49792 3224 aaKnown RBP10.96□□□□□ -0.65
ARHGEF28-204ENST00000437974 A0A0C4DFX4 3053 aa10.94□□□□□ -0.66
ARHGEF28-204ENST00000437974 LAMA3Q16787 3333 aa10.9□□□□□ -0.66
ARHGEF28-204ENST00000437974 TRANK1O15050 2925 aa10.89□□□□□ -0.67
ARHGEF28-204ENST00000437974 OXTP01178 125 aa10.88□□□□□ -0.67
ARHGEF28-204ENST00000437974 Q5VV11 94 aa10.86□□□□□ -0.67
ARHGEF28-204ENST00000437974 CENPEQ02224 2701 aa10.85□□□□□ -0.67
ARHGEF28-204ENST00000437974 MGAQ8IWI9 3026 aa10.85□□□□□ -0.67
ARHGEF28-204ENST00000437974 SETXQ7Z333 2677 aaKnown RBP10.84□□□□□ -0.67
ARHGEF28-204ENST00000437974 BRCA2P51587 3418 aa10.83□□□□□ -0.68
ARHGEF28-204ENST00000437974 TEX15Q9BXT5 2789 aa10.83□□□□□ -0.68
ARHGEF28-204ENST00000437974 TEP1Q99973 2627 aaKnown RBP10.82□□□□□ -0.68
ARHGEF28-204ENST00000437974 Q6ZR54 194 aa10.82□□□□□ -0.68
ARHGEF28-204ENST00000437974 PRAC1Q96KF2 57 aa10.78□□□□□ -0.68
ARHGEF28-204ENST00000437974 LAMA2P24043 3122 aaKnown RBP10.77□□□□□ -0.69
ARHGEF28-204ENST00000437974 PANO1I0J062 215 aa10.77□□□□□ -0.69
ARHGEF28-204ENST00000437974 AKAP13Q12802 2813 aa10.76□□□□□ -0.69
ARHGEF28-204ENST00000437974 M0QZ58 72 aa10.75□□□□□ -0.69
ARHGEF28-204ENST00000437974 KRTAP4-16G5E9R7 235 aaPredicted RBP10.74□□□□□ -0.69
ARHGEF28-204ENST00000437974 CHD6Q8TD26 2715 aa10.73□□□□□ -0.69
ARHGEF28-204ENST00000437974 FLG2Q5D862 2391 aaPredicted RBP10.73□□□□□ -0.69
ARHGEF28-204ENST00000437974 NBEAL1Q6ZS30 2694 aa10.73□□□□□ -0.69
ARHGEF28-204ENST00000437974 COL6A5A8TX70 2615 aa10.72□□□□□ -0.69
ARHGEF28-204ENST00000437974 RPL37P61927 97 aaKnown RBP10.69□□□□□ -0.7
ARHGEF28-204ENST00000437974 PLAC4Q8WY50 150 aa10.68□□□□□ -0.7
ARHGEF28-204ENST00000437974 TRIOO75962 3097 aa10.68□□□□□ -0.7
ARHGEF28-204ENST00000437974 A0A087X002 238 aa10.67□□□□□ -0.7
ARHGEF28-204ENST00000437974 UNC80Q8N2C7 3258 aa10.66□□□□□ -0.7
ARHGEF28-204ENST00000437974 WDFY4Q6ZS81 3184 aa10.66□□□□□ -0.7
ARHGEF28-204ENST00000437974 H1FX-AS1Q4G0G2 97 aa10.62□□□□□ -0.71
ARHGEF28-204ENST00000437974 UNC79Q9P2D8 2635 aa10.62□□□□□ -0.71
ARHGEF28-204ENST00000437974 ADM2Q7Z4H4 148 aa10.62□□□□□ -0.71
ARHGEF28-204ENST00000437974 PRUNE2Q8WUY3 3088 aa10.62□□□□□ -0.71
ARHGEF28-204ENST00000437974 ZNF292O60281 2723 aa10.61□□□□□ -0.71
ARHGEF28-204ENST00000437974 KRTAP29-1A8MX34 341 aaPredicted RBP10.61□□□□□ -0.71
ARHGEF28-204ENST00000437974 BAHCC1Q9P281 2608 aa10.59□□□□□ -0.71
ARHGEF28-204ENST00000437974 XIRP2A4UGR9 3374 aa10.59□□□□□ -0.71
ARHGEF28-204ENST00000437974 ROMO1P60602 79 aa10.57□□□□□ -0.72
ARHGEF28-204ENST00000437974 CDH23Q9H251 3354 aa10.56□□□□□ -0.72
ARHGEF28-204ENST00000437974 GCN1Q92616 2671 aaKnown RBP10.54□□□□□ -0.72
ARHGEF28-204ENST00000437974 RPS29P62273 56 aaKnown RBP10.52□□□□□ -0.72
ARHGEF28-204ENST00000437974 NOTCH1P46531 2555 aa10.52□□□□□ -0.73
ARHGEF28-204ENST00000437974 KRTAP11-1Q8IUC1 163 aa10.51□□□□□ -0.73
ARHGEF28-204ENST00000437974 Q6ZRN7 208 aaPredicted RBP10.51□□□□□ -0.73
ARHGEF28-204ENST00000437974 NOTCH2NLQ7Z3S9 236 aa10.5□□□□□ -0.73
ARHGEF28-204ENST00000437974 ASB16-AS1Q495Z4 193 aa10.47□□□□□ -0.73
ARHGEF28-204ENST00000437974 DMBT1Q9UGM3 2413 aaPredicted RBP10.45□□□□□ -0.74
ARHGEF28-204ENST00000437974 A0A0A0MQY5 61 aa10.45□□□□□ -0.74
ARHGEF28-204ENST00000437974 SPATA8Q6RVD6 105 aa10.45□□□□□ -0.74
ARHGEF28-204ENST00000437974 FRYQ5TBA9 3013 aa10.45□□□□□ -0.74
ARHGEF28-204ENST00000437974 VPS13AQ96RL7 3174 aa10.44□□□□□ -0.74
ARHGEF28-204ENST00000437974 KRTAP7-1Q8IUC3 87 aa10.44□□□□□ -0.74
ARHGEF28-204ENST00000437974 CELSR3Q9NYQ7 3312 aa10.43□□□□□ -0.74
ARHGEF28-204ENST00000437974 DSPP15924 2871 aaKnown RBP10.41□□□□□ -0.74
ARHGEF28-204ENST00000437974 KRTAP21-3Q3LHN1 58 aa10.4□□□□□ -0.74
ARHGEF28-204ENST00000437974 NBEAL2Q6ZNJ1 2754 aa10.4□□□□□ -0.74
ARHGEF28-204ENST00000437974 IGSF10Q6WRI0 2623 aa10.39□□□□□ -0.75
ARHGEF28-204ENST00000437974 DNAH14Q0VDD8 3507 aa10.37□□□□□ -0.75
ARHGEF28-204ENST00000437974 H3BS24 57 aa10.34□□□□□ -0.75
ARHGEF28-204ENST00000437974 KRTAP13-2Q52LG2 175 aa10.32□□□□□ -0.76
ARHGEF28-204ENST00000437974 STAB2Q8WWQ8 2551 aa10.31□□□□□ -0.76
ARHGEF28-204ENST00000437974 A8MUU9 505 aa10.31□□□□□ -0.76
ARHGEF28-204ENST00000437974 MAP1AP78559 2803 aaPredicted RBP10.29□□□□□ -0.76
ARHGEF28-204ENST00000437974 UBR5O95071 2799 aaPredicted RBP10.29□□□□□ -0.76
ARHGEF28-204ENST00000437974 SZT2Q5T011 3432 aa10.28□□□□□ -0.76
ARHGEF28-204ENST00000437974 C20orf166-AS1Q96NR2 134 aa10.28□□□□□ -0.76
ARHGEF28-204ENST00000437974 NSD1Q96L73 2696 aaPredicted RBP10.26□□□□□ -0.77
ARHGEF28-204ENST00000437974 VCANP13611 3396 aa10.26□□□□□ -0.77
ARHGEF28-204ENST00000437974 FREM2Q5SZK8 3169 aa10.26□□□□□ -0.77
ARHGEF28-204ENST00000437974 ITPR2Q14571 2701 aa10.25□□□□□ -0.77
ARHGEF28-204ENST00000437974 KRTAP13-1Q8IUC0 172 aa10.24□□□□□ -0.77
ARHGEF28-204ENST00000437974 LAMA1P25391 3075 aa10.22□□□□□ -0.77
ARHGEF28-204ENST00000437974 KALRNO60229 2985 aa10.21□□□□□ -0.77
ARHGEF28-204ENST00000437974 A8MU10 97 aa10.15□□□□□ -0.79
ARHGEF28-204ENST00000437974 A6NN06 94 aa10.13□□□□□ -0.79
ARHGEF28-204ENST00000437974 COL6A3P12111 3177 aa10.13□□□□□ -0.79
ARHGEF28-204ENST00000437974 LRBAP50851 2863 aa10.09□□□□□ -0.79
ARHGEF28-204ENST00000437974 ATMQ13315 3056 aa10.06□□□□□ -0.8
ARHGEF28-204ENST00000437974 ITPR1Q14643 2758 aa10.04□□□□□ -0.8
ARHGEF28-204ENST00000437974 KMT2BQ9UMN6 2715 aaPredicted RBP10.04□□□□□ -0.8
ARHGEF28-204ENST00000437974 NBEAQ8NFP9 2946 aa10.03□□□□□ -0.8
ARHGEF28-204ENST00000437974 KRTAP25-1Q3LHN0 102 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms