RNA–Protein interactions for RNA: ENST00000437340.5

CPNE1-216, Transcript of copine 1, humanhuman

TSL 1 (best)

Gene CPNE1, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-216ENST00000437340 HECTD4Q9Y4D8 3996 aa15.94■□□□□ 0.14
CPNE1-216ENST00000437340 IGLV5-52A0A0A0MRZ9 124 aa15.93■□□□□ 0.14
CPNE1-216ENST00000437340 LCE6AA0A183 80 aa15.93■□□□□ 0.14
CPNE1-216ENST00000437340 ATOX1O00244 68 aa15.93■□□□□ 0.14
CPNE1-216ENST00000437340 A0A1W2PNM2 257 aa15.92■□□□□ 0.14
CPNE1-216ENST00000437340 Q8NBF4 154 aa15.92■□□□□ 0.14
CPNE1-216ENST00000437340 SPRR1BP22528 89 aa15.91■□□□□ 0.14
CPNE1-216ENST00000437340 KRTAP13-1Q8IUC0 172 aa15.9■□□□□ 0.14
CPNE1-216ENST00000437340 IGLV8-61A0A075B6I0 122 aa15.9■□□□□ 0.14
CPNE1-216ENST00000437340 NREPQ16612 68 aa15.89■□□□□ 0.13
CPNE1-216ENST00000437340 SPRR4Q96PI1 79 aa15.89■□□□□ 0.13
CPNE1-216ENST00000437340 PLAC8Q9NZF1 115 aa15.89■□□□□ 0.13
CPNE1-216ENST00000437340 CCDC179H3BU77 68 aa15.84■□□□□ 0.13
CPNE1-216ENST00000437340 FAT2Q9NYQ8 4349 aa15.82■□□□□ 0.12
CPNE1-216ENST00000437340 CRYGAP11844 174 aa15.81■□□□□ 0.12
CPNE1-216ENST00000437340 IGFL1Q6UW32 110 aa15.8■□□□□ 0.12
CPNE1-216ENST00000437340 DNAH11Q96DT5 4516 aa15.79■□□□□ 0.12
CPNE1-216ENST00000437340 UQCRQO14949 82 aa15.77■□□□□ 0.11
CPNE1-216ENST00000437340 RYR2Q92736 4967 aa15.77■□□□□ 0.11
CPNE1-216ENST00000437340 KMT2CQ8NEZ4 4911 aaKnown RBP15.76■□□□□ 0.11
CPNE1-216ENST00000437340 BPY2O14599 106 aa15.76■□□□□ 0.11
CPNE1-216ENST00000437340 SCXQ7RTU7 201 aa15.76■□□□□ 0.11
CPNE1-216ENST00000437340 COX7CP15954 63 aa15.75■□□□□ 0.11
CPNE1-216ENST00000437340 PSORS1C2Q9UIG4 136 aa15.75■□□□□ 0.11
CPNE1-216ENST00000437340 SERP2Q8N6R1 65 aa15.73■□□□□ 0.11
CPNE1-216ENST00000437340 PKD1P98161 4303 aa15.7■□□□□ 0.1
CPNE1-216ENST00000437340 DNAH5Q8TE73 4624 aa15.7■□□□□ 0.1
CPNE1-216ENST00000437340 KRTAP10-2P60368 255 aa15.69■□□□□ 0.1
CPNE1-216ENST00000437340 ZNF706Q9Y5V0 76 aaPredicted RBP15.67■□□□□ 0.1
CPNE1-216ENST00000437340 DNAH8Q96JB1 4490 aa15.66■□□□□ 0.1
CPNE1-216ENST00000437340 A0A0G2JQZ4 141 aa15.66■□□□□ 0.1
CPNE1-216ENST00000437340 IGKV4-1P06312 121 aa15.66■□□□□ 0.1
CPNE1-216ENST00000437340 LINC00483Q53H64 154 aa15.66■□□□□ 0.1
CPNE1-216ENST00000437340 ZNF861PO60384 105 aa15.65■□□□□ 0.1
CPNE1-216ENST00000437340 SRRM2Q9UQ35 2752 aaKnown RBP15.63■□□□□ 0.09
CPNE1-216ENST00000437340 C9orf153Q5TBE3 101 aa15.62■□□□□ 0.09
CPNE1-216ENST00000437340 SMIM20Q8N5G0 67 aa15.62■□□□□ 0.09
CPNE1-216ENST00000437340 Q8N9L7 120 aa15.61■□□□□ 0.09
CPNE1-216ENST00000437340 A0A087WSZ3 146 aa15.59■□□□□ 0.09
CPNE1-216ENST00000437340 RPL37AP61513 92 aaKnown RBP15.58■□□□□ 0.08
CPNE1-216ENST00000437340 LINC00336Q6ZUF6 198 aa15.57■□□□□ 0.08
CPNE1-216ENST00000437340 FAM30AQ9NZY2 134 aa15.57■□□□□ 0.08
CPNE1-216ENST00000437340 Q6ZSA8 131 aa15.56■□□□□ 0.08
CPNE1-216ENST00000437340 CIRBP-AS1Q8TBR5 109 aa15.56■□□□□ 0.08
CPNE1-216ENST00000437340 TRAV7A0A075B6U4 112 aa15.55■□□□□ 0.08
CPNE1-216ENST00000437340 IGLV7-43P04211 117 aa15.54■□□□□ 0.08
CPNE1-216ENST00000437340 DSCR10P59022 87 aa15.54■□□□□ 0.08
CPNE1-216ENST00000437340 IGLV9-49A0A0B4J1Y8 123 aa15.49■□□□□ 0.07
CPNE1-216ENST00000437340 KRTAP10-1P60331 282 aa15.49■□□□□ 0.07
CPNE1-216ENST00000437340 RYR3Q15413 4870 aa15.47■□□□□ 0.07
CPNE1-216ENST00000437340 A0A1B0GVY2 172 aa15.46■□□□□ 0.07
CPNE1-216ENST00000437340 PKHD1P08F94 4074 aa15.45■□□□□ 0.06
CPNE1-216ENST00000437340 K7EQZ3 153 aa15.45■□□□□ 0.06
CPNE1-216ENST00000437340 LINC00472Q9H8W2 130 aa15.41■□□□□ 0.06
CPNE1-216ENST00000437340 SS18L2Q9UHA2 77 aa15.4■□□□□ 0.06
CPNE1-216ENST00000437340 MOBPQ13875 183 aa15.38■□□□□ 0.05
CPNE1-216ENST00000437340 DEFB116Q30KQ4 102 aa15.38■□□□□ 0.05
CPNE1-216ENST00000437340 ANAPC11Q9NYG5 84 aa15.36■□□□□ 0.05
CPNE1-216ENST00000437340 OCR1Q9BZK8 76 aa15.36■□□□□ 0.05
CPNE1-216ENST00000437340 C20orf197Q8N268 126 aa15.35■□□□□ 0.05
CPNE1-216ENST00000437340 CYSTM1Q9H1C7 97 aa15.34■□□□□ 0.05
CPNE1-216ENST00000437340 LRP1BQ9NZR2 4599 aa15.33■□□□□ 0.04
CPNE1-216ENST00000437340 HCG22E2RYF7 251 aa15.33■□□□□ 0.04
CPNE1-216ENST00000437340 J3KT08 172 aa15.33■□□□□ 0.04
CPNE1-216ENST00000437340 DYNC1H1Q14204 4646 aaKnown RBP15.31■□□□□ 0.04
CPNE1-216ENST00000437340 A8MWP4 228 aa15.3■□□□□ 0.04
CPNE1-216ENST00000437340 KLKP1Q107X0 134 aa15.29■□□□□ 0.04
CPNE1-216ENST00000437340 PRR15Q8IV56 129 aa15.29■□□□□ 0.04
CPNE1-216ENST00000437340 TMEM258P61165 79 aa15.26■□□□□ 0.03
CPNE1-216ENST00000437340 HRCT1Q6UXD1 115 aa15.25■□□□□ 0.03
CPNE1-216ENST00000437340 SSBP3-AS1Q7Z2R9 100 aa15.24■□□□□ 0.03
CPNE1-216ENST00000437340 Q96NJ1 140 aa15.24■□□□□ 0.03
CPNE1-216ENST00000437340 CD164Q04900 197 aa15.2■□□□□ 0.02
CPNE1-216ENST00000437340 TMEM254Q8TBM7 123 aa15.2■□□□□ 0.02
CPNE1-216ENST00000437340 NDUFB1O75438 58 aa15.19■□□□□ 0.02
CPNE1-216ENST00000437340 KRTAP29-1A8MX34 341 aaPredicted RBP15.18■□□□□ 0.02
CPNE1-216ENST00000437340 FAM229BQ4G0N7 80 aa15.17■□□□□ 0.02
CPNE1-216ENST00000437340 SNURFQ9Y675 71 aa15.16■□□□□ 0.02
CPNE1-216ENST00000437340 WFDC13Q8IUB5 93 aa15.16■□□□□ 0.02
CPNE1-216ENST00000437340 NDUFC1O43677 76 aa15.14■□□□□ 0.01
CPNE1-216ENST00000437340 APOBP04114 4563 aaKnown RBP15.14■□□□□ 0.01
CPNE1-216ENST00000437340 H7BZZ5 65 aa15.13■□□□□ 0.01
CPNE1-216ENST00000437340 CASC2Q6XLA1 102 aa15.13■□□□□ 0.01
CPNE1-216ENST00000437340 A0A0U1RQV1 116 aa15.11■□□□□ 0.01
CPNE1-216ENST00000437340 A0A087X002 238 aa15.08■□□□□ 0
CPNE1-216ENST00000437340 MMP24-AS1A0A0U1RRL7 71 aa15.07■□□□□ 0
CPNE1-216ENST00000437340 C5orf47Q569G3 176 aa15.07■□□□□ 0
CPNE1-216ENST00000437340 KRTAP13-2Q52LG2 175 aa15.06■□□□□ 0
CPNE1-216ENST00000437340 VPS13BQ7Z7G8 4022 aa15.05■□□□□ -0
CPNE1-216ENST00000437340 KRTAP1-4P0C5Y4 121 aa15.05■□□□□ -0
CPNE1-216ENST00000437340 CDK2AP2O75956 126 aa15.03■□□□□ -0
CPNE1-216ENST00000437340 ASB16-AS1Q495Z4 193 aa15.03■□□□□ -0
CPNE1-216ENST00000437340 A0A1B0GVX0 72 aa15.02□□□□□ -0.01
CPNE1-216ENST00000437340 hDV103S1A0JD37 113 aa15.01□□□□□ -0.01
CPNE1-216ENST00000437340 FAM236DA0A1B0GTK5 79 aa14.99□□□□□ -0.01
CPNE1-216ENST00000437340 FAM236CP0DP71 79 aa14.99□□□□□ -0.01
CPNE1-216ENST00000437340 C8orf17Q9NRJ1 99 aa14.99□□□□□ -0.01
CPNE1-216ENST00000437340 RPS28P62857 69 aaKnown RBP14.98□□□□□ -0.01
CPNE1-216ENST00000437340 SPINK6Q6UWN8 80 aa14.98□□□□□ -0.01
CPNE1-216ENST00000437340 Q5XG85 94 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms