RNA–Protein interactions for RNA: ENST00000433645.1

LINC01239-201, Transcript of long intergenic non-protein coding RNA 1239, humanhuman

TSL 3

Gene LINC01239, Length 325 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01239-201ENST00000433645 S4R3F8 94 aa-2.36□□□□□ -2.79
LINC01239-201ENST00000433645 NESP48681 1621 aa-2.36□□□□□ -2.79
LINC01239-201ENST00000433645 POLR1AO95602 1720 aaPredicted RBP-2.37□□□□□ -2.79
LINC01239-201ENST00000433645 DEPDC5O75140 1603 aa-2.39□□□□□ -2.79
LINC01239-201ENST00000433645 LINC00158P58513 81 aa-2.4□□□□□ -2.79
LINC01239-201ENST00000433645 PLGLAQ15195 96 aa-2.4□□□□□ -2.79
LINC01239-201ENST00000433645 NWD1Q149M9 1564 aa-2.4□□□□□ -2.79
LINC01239-201ENST00000433645 DNAH7Q8WXX0 4024 aa-2.4□□□□□ -2.79
LINC01239-201ENST00000433645 LTN1O94822 1766 aa-2.41□□□□□ -2.79
LINC01239-201ENST00000433645 IQCF6A8MYZ5 107 aa-2.41□□□□□ -2.8
LINC01239-201ENST00000433645 FAUP35544 74 aaKnown RBP-2.41□□□□□ -2.8
LINC01239-201ENST00000433645 K7EP34 96 aa-2.42□□□□□ -2.8
LINC01239-201ENST00000433645 HMGN2P05204 90 aaKnown RBP-2.42□□□□□ -2.8
LINC01239-201ENST00000433645 S100A10P60903 97 aa-2.42□□□□□ -2.8
LINC01239-201ENST00000433645 DPY30Q9C005 99 aa-2.42□□□□□ -2.8
LINC01239-201ENST00000433645 ATP10BO94823 1461 aa-2.42□□□□□ -2.8
LINC01239-201ENST00000433645 BAZ1AQ9NRL2 1556 aaPredicted RBP-2.42□□□□□ -2.8
LINC01239-201ENST00000433645 COL12A1Q99715 3063 aa-2.42□□□□□ -2.8
LINC01239-201ENST00000433645 C5orf42Q9H799 3197 aa-2.44□□□□□ -2.8
LINC01239-201ENST00000433645 DEFB110Q30KQ9 67 aa-2.44□□□□□ -2.8
LINC01239-201ENST00000433645 MYO3AQ8NEV4 1616 aa-2.44□□□□□ -2.8
LINC01239-201ENST00000433645 CELSR3Q9NYQ7 3312 aa-2.44□□□□□ -2.8
LINC01239-201ENST00000433645 TLN2Q9Y4G6 2542 aa-2.44□□□□□ -2.8
LINC01239-201ENST00000433645 CYB5AP00167 134 aa-2.45□□□□□ -2.8
LINC01239-201ENST00000433645 CEP170BQ9Y4F5 1589 aaPredicted RBP-2.45□□□□□ -2.8
LINC01239-201ENST00000433645 KRTAP19-5Q3LI72 72 aa-2.46□□□□□ -2.8
LINC01239-201ENST00000433645 DYNC1H1Q14204 4646 aaKnown RBP-2.47□□□□□ -2.8
LINC01239-201ENST00000433645 UBR1Q8IWV7 1749 aa-2.47□□□□□ -2.8
LINC01239-201ENST00000433645 SMIM11AP58511 58 aa-2.47□□□□□ -2.8
LINC01239-201ENST00000433645 MAGI3Q5TCQ9 1506 aa-2.47□□□□□ -2.81
LINC01239-201ENST00000433645 DEFB1P60022 68 aa-2.48□□□□□ -2.81
LINC01239-201ENST00000433645 DOT1LQ8TEK3 1739 aa-2.48□□□□□ -2.81
LINC01239-201ENST00000433645 TRAV21A0A0B4J279 112 aa-2.49□□□□□ -2.81
LINC01239-201ENST00000433645 SARNPP82979 210 aaKnown RBP-2.49□□□□□ -2.81
LINC01239-201ENST00000433645 LCE6AA0A183 80 aa-2.5□□□□□ -2.81
LINC01239-201ENST00000433645 H0YAA0 97 aa-2.5□□□□□ -2.81
LINC01239-201ENST00000433645 S100PP25815 95 aa-2.5□□□□□ -2.81
LINC01239-201ENST00000433645 C14orf144Q96I85 54 aa-2.5□□□□□ -2.81
LINC01239-201ENST00000433645 LYNX1G3V0Z9 82 aa-2.51□□□□□ -2.81
LINC01239-201ENST00000433645 PEA15Q15121 130 aa-2.52□□□□□ -2.81
LINC01239-201ENST00000433645 WFDC9Q8NEX5 89 aa-2.52□□□□□ -2.81
LINC01239-201ENST00000433645 TCEAL7Q9BRU2 100 aa-2.52□□□□□ -2.81
LINC01239-201ENST00000433645 CNTLNQ9NXG0 1405 aa-2.52□□□□□ -2.81
LINC01239-201ENST00000433645 NEXMIFQ5QGS0 1516 aa-2.52□□□□□ -2.81
LINC01239-201ENST00000433645 ACBD7Q8N6N7 88 aa-2.53□□□□□ -2.81
LINC01239-201ENST00000433645 NDUFB1O75438 58 aa-2.55□□□□□ -2.82
LINC01239-201ENST00000433645 ANKRD26Q9UPS8 1709 aa-2.56□□□□□ -2.82
LINC01239-201ENST00000433645 PLIN4Q96Q06 1357 aa-2.56□□□□□ -2.82
LINC01239-201ENST00000433645 GYPAP02724 150 aa-2.56□□□□□ -2.82
LINC01239-201ENST00000433645 RBP2P50120 134 aa-2.56□□□□□ -2.82
LINC01239-201ENST00000433645 DYNC2H1Q8NCM8 4307 aaKnown RBP-2.56□□□□□ -2.82
LINC01239-201ENST00000433645 ITPR1Q14643 2758 aa-2.56□□□□□ -2.82
LINC01239-201ENST00000433645 BPTFQ12830 3046 aa-2.57□□□□□ -2.82
LINC01239-201ENST00000433645 CEP162Q5TB80 1403 aa-2.57□□□□□ -2.82
LINC01239-201ENST00000433645 IFI6P09912 130 aa-2.58□□□□□ -2.82
LINC01239-201ENST00000433645 DEFB130BP0DP73 79 aa-2.58□□□□□ -2.82
LINC01239-201ENST00000433645 DEFB130AP0DP74 79 aa-2.58□□□□□ -2.82
LINC01239-201ENST00000433645 SRCAPQ6ZRS2 3230 aa-2.59□□□□□ -2.82
LINC01239-201ENST00000433645 DIP2BQ9P265 1576 aa-2.6□□□□□ -2.83
LINC01239-201ENST00000433645 DDX60LQ5H9U9 1706 aaKnown RBP-2.6□□□□□ -2.83
LINC01239-201ENST00000433645 TMEM131LA2VDJ0 1609 aa-2.6□□□□□ -2.83
LINC01239-201ENST00000433645 SPENQ96T58 3664 aaKnown RBP-2.61□□□□□ -2.83
LINC01239-201ENST00000433645 CHD7Q9P2D1 2997 aa-2.61□□□□□ -2.83
LINC01239-201ENST00000433645 MYMXA0A1B0GTQ4 84 aa-2.61□□□□□ -2.83
LINC01239-201ENST00000433645 DEFB106AQ8N104 65 aa-2.61□□□□□ -2.83
LINC01239-201ENST00000433645 IAPPP10997 89 aa-2.62□□□□□ -2.83
LINC01239-201ENST00000433645 SPTBN5Q9NRC6 3674 aaKnown RBP-2.62□□□□□ -2.83
LINC01239-201ENST00000433645 CCDC88BA6NC98 1476 aa-2.63□□□□□ -2.83
LINC01239-201ENST00000433645 ARFGEF2Q9Y6D5 1785 aa-2.63□□□□□ -2.83
LINC01239-201ENST00000433645 C20orf78Q9BR46 151 aa-2.63□□□□□ -2.83
LINC01239-201ENST00000433645 ZNF831Q5JPB2 1677 aa-2.63□□□□□ -2.83
LINC01239-201ENST00000433645 ATP6V1G2-DDX39BF2Z307 99 aa-2.64□□□□□ -2.83
LINC01239-201ENST00000433645 MT1XP80297 61 aa-2.64□□□□□ -2.83
LINC01239-201ENST00000433645 LRBAP50851 2863 aa-2.64□□□□□ -2.83
LINC01239-201ENST00000433645 NCOA2Q15596 1464 aa-2.65□□□□□ -2.83
LINC01239-201ENST00000433645 NCMAPQ5T1S8 102 aa-2.65□□□□□ -2.83
LINC01239-201ENST00000433645 URB2Q14146 1524 aaKnown RBP-2.65□□□□□ -2.83
LINC01239-201ENST00000433645 CEP295Q9C0D2 2601 aa-2.65□□□□□ -2.83
LINC01239-201ENST00000433645 ABCA13Q86UQ4 5058 aa-2.66□□□□□ -2.83
LINC01239-201ENST00000433645 RABAC1Q9UI14 185 aa-2.66□□□□□ -2.84
LINC01239-201ENST00000433645 THOC2Q8NI27 1593 aaKnown RBP-2.66□□□□□ -2.84
LINC01239-201ENST00000433645 ANKRD36CQ5JPF3 1778 aa-2.66□□□□□ -2.84
LINC01239-201ENST00000433645 AKAP12Q02952 1782 aa-2.67□□□□□ -2.84
LINC01239-201ENST00000433645 MYO9AB2RTY4 2548 aa-2.68□□□□□ -2.84
LINC01239-201ENST00000433645 COL6A5A8TX70 2615 aa-2.68□□□□□ -2.84
LINC01239-201ENST00000433645 M0R143 59 aa-2.68□□□□□ -2.84
LINC01239-201ENST00000433645 ACYP1P07311 99 aa-2.68□□□□□ -2.84
LINC01239-201ENST00000433645 ITSN1Q15811 1721 aa-2.69□□□□□ -2.84
LINC01239-201ENST00000433645 CSMD1Q96PZ7 3565 aa-2.7□□□□□ -2.84
LINC01239-201ENST00000433645 CEBPZOSA8MTT3 80 aa-2.7□□□□□ -2.84
LINC01239-201ENST00000433645 IFI27P40305 119 aaPredicted RBP-2.7□□□□□ -2.84
LINC01239-201ENST00000433645 ABCC10Q5T3U5 1492 aa-2.71□□□□□ -2.84
LINC01239-201ENST00000433645 SNRPFP62306 86 aaKnown RBP-2.72□□□□□ -2.84
LINC01239-201ENST00000433645 LINC00643Q86TS7 51 aa-2.72□□□□□ -2.84
LINC01239-201ENST00000433645 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP-2.73□□□□□ -2.85
LINC01239-201ENST00000433645 VPS8Q8N3P4 1428 aa-2.73□□□□□ -2.85
LINC01239-201ENST00000433645 SMR3BP02814 79 aaPredicted RBP-2.73□□□□□ -2.85
LINC01239-201ENST00000433645 PLCH1Q4KWH8 1693 aa-2.73□□□□□ -2.85
LINC01239-201ENST00000433645 SMG1Q96Q15 3661 aaKnown RBP-2.74□□□□□ -2.85
LINC01239-201ENST00000433645 CLPSL2Q6UWE3 100 aa-2.74□□□□□ -2.85
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms