RNA–Protein interactions for RNA: ENST00000433360.5

PPP1R9A-206, Transcript of protein phosphatase 1 regulatory subunit 9A, humanhuman

TSL 1 (best) BASIC

Gene PPP1R9A, Length 5,369 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R9A-206ENST00000433360 OXTP01178 125 aa3.43□□□□□ -1.86
PPP1R9A-206ENST00000433360 LINC01558Q9Y6Z2 57 aa3.43□□□□□ -1.86
PPP1R9A-206ENST00000433360 MMP24-AS1A0A0U1RRL7 71 aa3.42□□□□□ -1.86
PPP1R9A-206ENST00000433360 LCE6AA0A183 80 aa3.42□□□□□ -1.86
PPP1R9A-206ENST00000433360 XIRP2A4UGR9 3374 aa3.41□□□□□ -1.86
PPP1R9A-206ENST00000433360 SPTBN5Q9NRC6 3674 aaKnown RBP3.4□□□□□ -1.87
PPP1R9A-206ENST00000433360 ANKRD17O75179 2603 aaKnown RBP3.4□□□□□ -1.87
PPP1R9A-206ENST00000433360 TLN2Q9Y4G6 2542 aa3.39□□□□□ -1.87
PPP1R9A-206ENST00000433360 R4GN34 69 aa3.39□□□□□ -1.87
PPP1R9A-206ENST00000433360 Q5VSD8 79 aa3.39□□□□□ -1.87
PPP1R9A-206ENST00000433360 Q5W150 140 aa3.38□□□□□ -1.87
PPP1R9A-206ENST00000433360 USP9YO00507 2555 aaPredicted RBP3.38□□□□□ -1.87
PPP1R9A-206ENST00000433360 SPINK7P58062 85 aa3.38□□□□□ -1.87
PPP1R9A-206ENST00000433360 LINC00472Q9H8W2 130 aa3.38□□□□□ -1.87
PPP1R9A-206ENST00000433360 A0A0A0MQY5 61 aa3.37□□□□□ -1.87
PPP1R9A-206ENST00000433360 CFAP54Q96N23 3096 aa3.35□□□□□ -1.87
PPP1R9A-206ENST00000433360 WDFY4Q6ZS81 3184 aa3.35□□□□□ -1.87
PPP1R9A-206ENST00000433360 MUC3AQ02505 3323 aa3.35□□□□□ -1.87
PPP1R9A-206ENST00000433360 RPS29P62273 56 aaKnown RBP3.35□□□□□ -1.87
PPP1R9A-206ENST00000433360 Q8N9P0 234 aaPredicted RBP3.34□□□□□ -1.87
PPP1R9A-206ENST00000433360 PLAC4Q8WY50 150 aa3.34□□□□□ -1.87
PPP1R9A-206ENST00000433360 HECTD1Q9ULT8 2610 aa3.34□□□□□ -1.87
PPP1R9A-206ENST00000433360 RPL37P61927 97 aaKnown RBP3.34□□□□□ -1.87
PPP1R9A-206ENST00000433360 ASB16-AS1Q495Z4 193 aa3.33□□□□□ -1.88
PPP1R9A-206ENST00000433360 BAHCC1Q9P281 2608 aa3.32□□□□□ -1.88
PPP1R9A-206ENST00000433360 TRIOO75962 3097 aa3.32□□□□□ -1.88
PPP1R9A-206ENST00000433360 ROMO1P60602 79 aa3.32□□□□□ -1.88
PPP1R9A-206ENST00000433360 KRTAP10-1P60331 282 aa3.31□□□□□ -1.88
PPP1R9A-206ENST00000433360 KRTAP26-1Q6PEX3 210 aa3.31□□□□□ -1.88
PPP1R9A-206ENST00000433360 H1FX-AS1Q4G0G2 97 aa3.31□□□□□ -1.88
PPP1R9A-206ENST00000433360 REV3LO60673 3130 aa3.31□□□□□ -1.88
PPP1R9A-206ENST00000433360 M0QZ58 72 aa3.3□□□□□ -1.88
PPP1R9A-206ENST00000433360 ZNF292O60281 2723 aa3.3□□□□□ -1.88
PPP1R9A-206ENST00000433360 Q6ZR54 194 aa3.3□□□□□ -1.88
PPP1R9A-206ENST00000433360 SETD2Q9BYW2 2564 aaPredicted RBP3.28□□□□□ -1.88
PPP1R9A-206ENST00000433360 USP24Q9UPU5 2620 aa3.28□□□□□ -1.88
PPP1R9A-206ENST00000433360 KRTAP1-5Q9BYS1 174 aa3.28□□□□□ -1.88
PPP1R9A-206ENST00000433360 CR1P17927 2039 aa3.28□□□□□ -1.88
PPP1R9A-206ENST00000433360 ACANP16112 2415 aa3.28□□□□□ -1.88
PPP1R9A-206ENST00000433360 Q5VV11 94 aa3.27□□□□□ -1.89
PPP1R9A-206ENST00000433360 SETXQ7Z333 2677 aaKnown RBP3.27□□□□□ -1.89
PPP1R9A-206ENST00000433360 HELZ2Q9BYK8 2649 aaKnown RBP3.27□□□□□ -1.89
PPP1R9A-206ENST00000433360 Q8NDZ9 215 aa3.27□□□□□ -1.89
PPP1R9A-206ENST00000433360 KRTAP10-2P60368 255 aa3.27□□□□□ -1.89
PPP1R9A-206ENST00000433360 VPS13AQ96RL7 3174 aa3.26□□□□□ -1.89
PPP1R9A-206ENST00000433360 KRTAP21-3Q3LHN1 58 aa3.26□□□□□ -1.89
PPP1R9A-206ENST00000433360 MAST4O15021 2626 aa3.26□□□□□ -1.89
PPP1R9A-206ENST00000433360 CHD6Q8TD26 2715 aa3.25□□□□□ -1.89
PPP1R9A-206ENST00000433360 MYO15AQ9UKN7 3530 aa3.25□□□□□ -1.89
PPP1R9A-206ENST00000433360 PANO1I0J062 215 aa3.25□□□□□ -1.89
PPP1R9A-206ENST00000433360 ADM2Q7Z4H4 148 aa3.25□□□□□ -1.89
PPP1R9A-206ENST00000433360 KRTAP4-16G5E9R7 235 aaPredicted RBP3.25□□□□□ -1.89
PPP1R9A-206ENST00000433360 Q5XG85 94 aa3.24□□□□□ -1.89
PPP1R9A-206ENST00000433360 PRRC2CQ9Y520 2896 aaKnown RBP3.24□□□□□ -1.89
PPP1R9A-206ENST00000433360 MGAM2Q2M2H8 2515 aa3.24□□□□□ -1.89
PPP1R9A-206ENST00000433360 KRTAP3-3Q9BYR6 98 aa3.24□□□□□ -1.89
PPP1R9A-206ENST00000433360 KRTAP3-2Q9BYR7 98 aa3.24□□□□□ -1.89
PPP1R9A-206ENST00000433360 DMXL1Q9Y485 3027 aa3.23□□□□□ -1.89
PPP1R9A-206ENST00000433360 KRTAP29-1A8MX34 341 aaPredicted RBP3.23□□□□□ -1.89
PPP1R9A-206ENST00000433360 DSPP15924 2871 aaKnown RBP3.2□□□□□ -1.9
PPP1R9A-206ENST00000433360 DMDP11532 3685 aa3.19□□□□□ -1.9
PPP1R9A-206ENST00000433360 PRAC1Q96KF2 57 aa3.19□□□□□ -1.9
PPP1R9A-206ENST00000433360 FRYLO94915 3013 aa3.19□□□□□ -1.9
PPP1R9A-206ENST00000433360 DNAH14Q0VDD8 3507 aa3.19□□□□□ -1.9
PPP1R9A-206ENST00000433360 ATRQ13535 2644 aa3.19□□□□□ -1.9
PPP1R9A-206ENST00000433360 CFAP47Q6ZTR5 3102 aa3.19□□□□□ -1.9
PPP1R9A-206ENST00000433360 SPATA8Q6RVD6 105 aa3.19□□□□□ -1.9
PPP1R9A-206ENST00000433360 AKAP13Q12802 2813 aa3.18□□□□□ -1.9
PPP1R9A-206ENST00000433360 A0A087X002 238 aa3.18□□□□□ -1.9
PPP1R9A-206ENST00000433360 DCHS1Q96JQ0 3298 aa3.18□□□□□ -1.9
PPP1R9A-206ENST00000433360 FRYQ5TBA9 3013 aa3.18□□□□□ -1.9
PPP1R9A-206ENST00000433360 LAMA1P25391 3075 aa3.17□□□□□ -1.9
PPP1R9A-206ENST00000433360 Q6ZRN7 208 aaPredicted RBP3.17□□□□□ -1.9
PPP1R9A-206ENST00000433360 KMT2BQ9UMN6 2715 aaPredicted RBP3.17□□□□□ -1.9
PPP1R9A-206ENST00000433360 A8MUU9 505 aa3.17□□□□□ -1.9
PPP1R9A-206ENST00000433360 IGSF10Q6WRI0 2623 aa3.16□□□□□ -1.9
PPP1R9A-206ENST00000433360 GCN1Q92616 2671 aaKnown RBP3.16□□□□□ -1.9
PPP1R9A-206ENST00000433360 ZFHX3Q15911 3703 aa3.15□□□□□ -1.9
PPP1R9A-206ENST00000433360 MGAQ8IWI9 3026 aa3.14□□□□□ -1.91
PPP1R9A-206ENST00000433360 CYSTM1Q9H1C7 97 aa3.14□□□□□ -1.91
PPP1R9A-206ENST00000433360 NOTCH2NLQ7Z3S9 236 aa3.13□□□□□ -1.91
PPP1R9A-206ENST00000433360 C20orf166-AS1Q96NR2 134 aa3.13□□□□□ -1.91
PPP1R9A-206ENST00000433360 TNP1P09430 55 aa3.13□□□□□ -1.91
PPP1R9A-206ENST00000433360 KRTAP13-1Q8IUC0 172 aa3.13□□□□□ -1.91
PPP1R9A-206ENST00000433360 DMXL2Q8TDJ6 3036 aa3.12□□□□□ -1.91
PPP1R9A-206ENST00000433360 CELSR3Q9NYQ7 3312 aa3.11□□□□□ -1.91
PPP1R9A-206ENST00000433360 KRTAP25-1Q3LHN0 102 aa3.11□□□□□ -1.91
PPP1R9A-206ENST00000433360 CFAP46Q8IYW2 2715 aa3.1□□□□□ -1.91
PPP1R9A-206ENST00000433360 FLNAP21333 2647 aaKnown RBP3.1□□□□□ -1.91
PPP1R9A-206ENST00000433360 KRTAP13-2Q52LG2 175 aa3.1□□□□□ -1.91
PPP1R9A-206ENST00000433360 TEP1Q99973 2627 aaKnown RBP3.1□□□□□ -1.91
PPP1R9A-206ENST00000433360 ITPR3Q14573 2671 aa3.1□□□□□ -1.91
PPP1R9A-206ENST00000433360 PP632Q6XCG6 107 aa3.1□□□□□ -1.91
PPP1R9A-206ENST00000433360 ASPMQ8IZT6 3477 aa3.09□□□□□ -1.91
PPP1R9A-206ENST00000433360 STAB1Q9NY15 2570 aa3.09□□□□□ -1.91
PPP1R9A-206ENST00000433360 FREM2Q5SZK8 3169 aa3.09□□□□□ -1.91
PPP1R9A-206ENST00000433360 NOTCH1P46531 2555 aa3.08□□□□□ -1.92
PPP1R9A-206ENST00000433360 ZZEF1O43149 2961 aa3.07□□□□□ -1.92
PPP1R9A-206ENST00000433360 KRTAP16-1A8MUX0 517 aa3.07□□□□□ -1.92
PPP1R9A-206ENST00000433360 ZFHX4Q86UP3 3567 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms