RNA–Protein interactions for RNA: ENST00000432954.1

CCDC171-202, Transcript of coiled-coil domain containing 171, humanhuman

TSL 2

Gene CCDC171, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-202ENST00000432954 SPTA1P02549 2419 aa6.28□□□□□ -1.4
CCDC171-202ENST00000432954 KRTAP9-6A0A140TA67 174 aa6.28□□□□□ -1.4
CCDC171-202ENST00000432954 COL12A1Q99715 3063 aa6.28□□□□□ -1.4
CCDC171-202ENST00000432954 SPTBN4Q9H254 2564 aa6.27□□□□□ -1.41
CCDC171-202ENST00000432954 Q6ZSA8 131 aa6.27□□□□□ -1.41
CCDC171-202ENST00000432954 TPRXLQ17RH7 258 aa6.26□□□□□ -1.41
CCDC171-202ENST00000432954 TENM2Q9NT68 2774 aa6.25□□□□□ -1.41
CCDC171-202ENST00000432954 MAP1AP78559 2803 aaPredicted RBP6.25□□□□□ -1.41
CCDC171-202ENST00000432954 PRO0255Q9UI72 69 aa6.24□□□□□ -1.41
CCDC171-202ENST00000432954 LY6EQ16553 131 aa6.24□□□□□ -1.41
CCDC171-202ENST00000432954 ITPR1Q14643 2758 aa6.24□□□□□ -1.41
CCDC171-202ENST00000432954 KRTAP17-1Q9BYP8 105 aa6.23□□□□□ -1.41
CCDC171-202ENST00000432954 H3BUX3 64 aa6.23□□□□□ -1.41
CCDC171-202ENST00000432954 ASPMQ8IZT6 3477 aa6.22□□□□□ -1.41
CCDC171-202ENST00000432954 K7EIL1 84 aa6.22□□□□□ -1.41
CCDC171-202ENST00000432954 TLN1Q9Y490 2541 aaKnown RBP6.22□□□□□ -1.41
CCDC171-202ENST00000432954 BSNQ9UPA5 3926 aa6.22□□□□□ -1.41
CCDC171-202ENST00000432954 CELSR3Q9NYQ7 3312 aa6.22□□□□□ -1.41
CCDC171-202ENST00000432954 Q6YL49 198 aa6.21□□□□□ -1.41
CCDC171-202ENST00000432954 CEP295Q9C0D2 2601 aa6.21□□□□□ -1.42
CCDC171-202ENST00000432954 LAMA5O15230 3695 aa6.21□□□□□ -1.42
CCDC171-202ENST00000432954 GIG44P09565 113 aaPredicted RBP6.21□□□□□ -1.42
CCDC171-202ENST00000432954 SPRR1BP22528 89 aa6.2□□□□□ -1.42
CCDC171-202ENST00000432954 CELSR2Q9HCU4 2923 aa6.19□□□□□ -1.42
CCDC171-202ENST00000432954 A0A096LPF7 62 aa6.18□□□□□ -1.42
CCDC171-202ENST00000432954 NCOR2Q9Y618 2525 aa6.18□□□□□ -1.42
CCDC171-202ENST00000432954 HIVEP3Q5T1R4 2406 aa6.18□□□□□ -1.42
CCDC171-202ENST00000432954 AKAP9Q99996 3911 aa6.18□□□□□ -1.42
CCDC171-202ENST00000432954 PRRC2CQ9Y520 2896 aaKnown RBP6.17□□□□□ -1.42
CCDC171-202ENST00000432954 SLURP1P55000 103 aa6.17□□□□□ -1.42
CCDC171-202ENST00000432954 C10orf99Q6UWK7 81 aa6.17□□□□□ -1.42
CCDC171-202ENST00000432954 ATMQ13315 3056 aa6.16□□□□□ -1.42
CCDC171-202ENST00000432954 PKD1L2Q7Z442 2459 aa6.16□□□□□ -1.42
CCDC171-202ENST00000432954 LELP1Q5T871 98 aa6.16□□□□□ -1.42
CCDC171-202ENST00000432954 FLG2Q5D862 2391 aaPredicted RBP6.14□□□□□ -1.43
CCDC171-202ENST00000432954 A0A1B0GU33 70 aa6.14□□□□□ -1.43
CCDC171-202ENST00000432954 DEFB130BP0DP73 79 aa6.14□□□□□ -1.43
CCDC171-202ENST00000432954 DEFB130AP0DP74 79 aa6.14□□□□□ -1.43
CCDC171-202ENST00000432954 KRTAP4-8A0A0G2JLE6 195 aa6.12□□□□□ -1.43
CCDC171-202ENST00000432954 ANKHD1Q8IWZ3 2542 aaKnown RBP6.12□□□□□ -1.43
CCDC171-202ENST00000432954 A0A1W2PPR1 153 aa6.11□□□□□ -1.43
CCDC171-202ENST00000432954 IGKV2-30P06310 120 aa6.11□□□□□ -1.43
CCDC171-202ENST00000432954 ACACBO00763 2458 aa6.11□□□□□ -1.43
CCDC171-202ENST00000432954 NOTCH3Q9UM47 2321 aa6.1□□□□□ -1.43
CCDC171-202ENST00000432954 H1FX-AS1Q4G0G2 97 aa6.1□□□□□ -1.43
CCDC171-202ENST00000432954 LCE3BQ5TA77 95 aa6.1□□□□□ -1.43
CCDC171-202ENST00000432954 LCE2CQ5TA81 110 aa6.1□□□□□ -1.43
CCDC171-202ENST00000432954 USP24Q9UPU5 2620 aa6.1□□□□□ -1.43
CCDC171-202ENST00000432954 CHD8Q9HCK8 2581 aa6.1□□□□□ -1.43
CCDC171-202ENST00000432954 LORP23490 312 aaPredicted RBP6.1□□□□□ -1.43
CCDC171-202ENST00000432954 LRBAP50851 2863 aa6.1□□□□□ -1.43
CCDC171-202ENST00000432954 ATRXP46100 2492 aa6.09□□□□□ -1.43
CCDC171-202ENST00000432954 KRTAP7-1Q8IUC3 87 aa6.08□□□□□ -1.44
CCDC171-202ENST00000432954 J3QKU1 62 aa6.07□□□□□ -1.44
CCDC171-202ENST00000432954 IGKV2D-30A0A075B6S6 120 aa6.06□□□□□ -1.44
CCDC171-202ENST00000432954 FAM229AH3BQW9 127 aa6.06□□□□□ -1.44
CCDC171-202ENST00000432954 CELSR1Q9NYQ6 3014 aa6.05□□□□□ -1.44
CCDC171-202ENST00000432954 IGSF10Q6WRI0 2623 aa6.05□□□□□ -1.44
CCDC171-202ENST00000432954 DOPEY1Q5JWR5 2465 aa6.05□□□□□ -1.44
CCDC171-202ENST00000432954 RELNP78509 3460 aa6.04□□□□□ -1.44
CCDC171-202ENST00000432954 KRTAP9-8Q9BYQ0 159 aa6.04□□□□□ -1.44
CCDC171-202ENST00000432954 SPG11Q96JI7 2443 aa6.03□□□□□ -1.44
CCDC171-202ENST00000432954 KRTAP24-1Q3LI83 254 aa6.03□□□□□ -1.44
CCDC171-202ENST00000432954 C4orf3Q8WVX3 66 aa6.03□□□□□ -1.44
CCDC171-202ENST00000432954 KRTAP4-7Q9BYR0 210 aa6.02□□□□□ -1.45
CCDC171-202ENST00000432954 CRYBG3Q68DQ2 2970 aa6.01□□□□□ -1.45
CCDC171-202ENST00000432954 C10orf95Q9H7T3 257 aa6.01□□□□□ -1.45
CCDC171-202ENST00000432954 DCHS2Q6V1P9 2916 aa6□□□□□ -1.45
CCDC171-202ENST00000432954 CREBBPQ92793 2442 aa6□□□□□ -1.45
CCDC171-202ENST00000432954 PRLHP81277 87 aa6□□□□□ -1.45
CCDC171-202ENST00000432954 NBASA2RRP1 2371 aa6□□□□□ -1.45
CCDC171-202ENST00000432954 UBR5O95071 2799 aaPredicted RBP6□□□□□ -1.45
CCDC171-202ENST00000432954 KRTAP5-3Q6L8H2 238 aa5.99□□□□□ -1.45
CCDC171-202ENST00000432954 NF1P21359 2839 aa5.98□□□□□ -1.45
CCDC171-202ENST00000432954 KRTAP9-9Q9BYP9 154 aa5.98□□□□□ -1.45
CCDC171-202ENST00000432954 KRTAP9-4Q9BYQ2 154 aa5.98□□□□□ -1.45
CCDC171-202ENST00000432954 NBPF19A0A087WUL8 3843 aa5.97□□□□□ -1.45
CCDC171-202ENST00000432954 CFAP46Q8IYW2 2715 aa5.97□□□□□ -1.45
CCDC171-202ENST00000432954 COX6B2Q6YFQ2 88 aa5.97□□□□□ -1.45
CCDC171-202ENST00000432954 FAM208BQ5VWN6 2430 aa5.96□□□□□ -1.46
CCDC171-202ENST00000432954 HRNRQ86YZ3 2850 aaPredicted RBP5.96□□□□□ -1.46
CCDC171-202ENST00000432954 TYMSOSQ8TAI1 123 aa5.94□□□□□ -1.46
CCDC171-202ENST00000432954 KRTAP4-12Q9BQ66 201 aa5.94□□□□□ -1.46
CCDC171-202ENST00000432954 RPL37P61927 97 aaKnown RBP5.93□□□□□ -1.46
CCDC171-202ENST00000432954 ZNF462Q96JM2 2506 aa5.93□□□□□ -1.46
CCDC171-202ENST00000432954 ADGRG4Q8IZF6 3080 aa5.93□□□□□ -1.46
CCDC171-202ENST00000432954 USP9XQ93008 2570 aaPredicted RBP5.93□□□□□ -1.46
CCDC171-202ENST00000432954 ABCA2Q9BZC7 2435 aa5.92□□□□□ -1.46
CCDC171-202ENST00000432954 KRTAP10-9P60411 292 aa5.92□□□□□ -1.46
CCDC171-202ENST00000432954 SPINK1P00995 79 aa5.91□□□□□ -1.46
CCDC171-202ENST00000432954 PRO2289Q9P1D8 64 aa5.91□□□□□ -1.46
CCDC171-202ENST00000432954 APCP25054 2843 aa5.91□□□□□ -1.46
CCDC171-202ENST00000432954 EPG5Q9HCE0 2579 aa5.9□□□□□ -1.47
CCDC171-202ENST00000432954 A0A096LNI7 61 aa5.89□□□□□ -1.47
CCDC171-202ENST00000432954 SVEP1Q4LDE5 3571 aa5.88□□□□□ -1.47
CCDC171-202ENST00000432954 SPTAN1Q13813 2472 aaKnown RBP5.86□□□□□ -1.47
CCDC171-202ENST00000432954 MYO18BQ8IUG5 2567 aa5.85□□□□□ -1.47
CCDC171-202ENST00000432954 FLNCQ14315 2725 aa5.85□□□□□ -1.47
CCDC171-202ENST00000432954 ZFYVE26Q68DK2 2539 aa5.85□□□□□ -1.47
CCDC171-202ENST00000432954 WWC2-AS2Q96NR7 200 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms