RNA–Protein interactions for RNA: ENST00000428555.1

TRIM39-208, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-208ENST00000428555 COPS9Q8WXC6 57 aa5.34□□□□□ -1.55
TRIM39-208ENST00000428555 M0R143 59 aa5.33□□□□□ -1.56
TRIM39-208ENST00000428555 SPRR1BP22528 89 aa5.33□□□□□ -1.56
TRIM39-208ENST00000428555 Q8N377 158 aa5.33□□□□□ -1.56
TRIM39-208ENST00000428555 DEFB105AQ8NG35 78 aa5.33□□□□□ -1.56
TRIM39-208ENST00000428555 FAT4Q6V0I7 4981 aa5.33□□□□□ -1.56
TRIM39-208ENST00000428555 TRBV7-6A0A0J9YX20 115 aa5.32□□□□□ -1.56
TRIM39-208ENST00000428555 SLC25A20O43772 301 aa5.31□□□□□ -1.56
TRIM39-208ENST00000428555 RPS29P62273 56 aaKnown RBP5.31□□□□□ -1.56
TRIM39-208ENST00000428555 KRTAP13-3Q3SY46 172 aa5.31□□□□□ -1.56
TRIM39-208ENST00000428555 LAMTOR3Q9UHA4 124 aa5.31□□□□□ -1.56
TRIM39-208ENST00000428555 TRAV13-2A0A0B4J235 113 aa5.3□□□□□ -1.56
TRIM39-208ENST00000428555 Q1RN00 199 aa5.3□□□□□ -1.56
TRIM39-208ENST00000428555 SLC25A34Q6PIV7 304 aa5.3□□□□□ -1.56
TRIM39-208ENST00000428555 HRCT1Q6UXD1 115 aa5.3□□□□□ -1.56
TRIM39-208ENST00000428555 SMIM11BQ8TCY0 68 aa5.3□□□□□ -1.56
TRIM39-208ENST00000428555 TEX49A0A1B0GTD5 131 aa5.29□□□□□ -1.56
TRIM39-208ENST00000428555 A0A1B0GWB2 263 aa5.29□□□□□ -1.56
TRIM39-208ENST00000428555 A0A1B0GX51 115 aa5.28□□□□□ -1.56
TRIM39-208ENST00000428555 SMIM29Q86T20 159 aa5.28□□□□□ -1.56
TRIM39-208ENST00000428555 A0A0U1RQV1 116 aa5.27□□□□□ -1.57
TRIM39-208ENST00000428555 LINC01547P58512 204 aaPredicted RBP5.27□□□□□ -1.57
TRIM39-208ENST00000428555 RPS28P62857 69 aaKnown RBP5.27□□□□□ -1.57
TRIM39-208ENST00000428555 IGLV5-48A0A075B6I7 105 aa5.26□□□□□ -1.57
TRIM39-208ENST00000428555 J3KT08 172 aa5.26□□□□□ -1.57
TRIM39-208ENST00000428555 PRO1933Q9H354 126 aa5.26□□□□□ -1.57
TRIM39-208ENST00000428555 A0A0G2JQZ4 141 aa5.25□□□□□ -1.57
TRIM39-208ENST00000428555 FAM240AA0A1B0GVK7 77 aa5.25□□□□□ -1.57
TRIM39-208ENST00000428555 ASB16-AS1Q495Z4 193 aa5.24□□□□□ -1.57
TRIM39-208ENST00000428555 LINC00575Q6W349 94 aa5.24□□□□□ -1.57
TRIM39-208ENST00000428555 HIST1H4GQ99525 98 aa5.24□□□□□ -1.57
TRIM39-208ENST00000428555 NHP2Q9NX24 153 aaKnown RBP5.24□□□□□ -1.57
TRIM39-208ENST00000428555 H7C2G1 150 aa5.23□□□□□ -1.57
TRIM39-208ENST00000428555 COX8AP10176 69 aa5.23□□□□□ -1.57
TRIM39-208ENST00000428555 LIMD2Q9BT23 127 aa5.23□□□□□ -1.57
TRIM39-208ENST00000428555 SEC61BP60468 96 aaKnown RBP5.22□□□□□ -1.57
TRIM39-208ENST00000428555 SNHG12Q9BXW3 62 aa5.22□□□□□ -1.57
TRIM39-208ENST00000428555 KRTAP4-1Q9BYQ7 146 aa5.22□□□□□ -1.57
TRIM39-208ENST00000428555 hADV29S1A0JD25 119 aa5.21□□□□□ -1.58
TRIM39-208ENST00000428555 COL5A1-AS1Q5SY13 56 aa5.21□□□□□ -1.58
TRIM39-208ENST00000428555 XP32Q5T750 250 aa5.21□□□□□ -1.58
TRIM39-208ENST00000428555 Q6ZQY7 126 aa5.2□□□□□ -1.58
TRIM39-208ENST00000428555 C9orf92A6NGG3 77 aa5.19□□□□□ -1.58
TRIM39-208ENST00000428555 SPATA45Q537H7 98 aa5.19□□□□□ -1.58
TRIM39-208ENST00000428555 Q5XG85 94 aa5.19□□□□□ -1.58
TRIM39-208ENST00000428555 Q6ZVQ6 151 aa5.19□□□□□ -1.58
TRIM39-208ENST00000428555 PAM16Q9Y3D7 125 aa5.19□□□□□ -1.58
TRIM39-208ENST00000428555 CFC1BP0CG36 223 aa5.18□□□□□ -1.58
TRIM39-208ENST00000428555 CFC1P0CG37 223 aa5.18□□□□□ -1.58
TRIM39-208ENST00000428555 PMAIP1Q13794 54 aa5.18□□□□□ -1.58
TRIM39-208ENST00000428555 F8WEM9 126 aa5.17□□□□□ -1.58
TRIM39-208ENST00000428555 BATFQ16520 125 aa5.17□□□□□ -1.58
TRIM39-208ENST00000428555 BVES-AS1Q5T3Y7 98 aa5.17□□□□□ -1.58
TRIM39-208ENST00000428555 VAMP8Q9BV40 100 aa5.17□□□□□ -1.58
TRIM39-208ENST00000428555 HIGD1BQ9P298 99 aa5.17□□□□□ -1.58
TRIM39-208ENST00000428555 FAM236DA0A1B0GTK5 79 aa5.16□□□□□ -1.58
TRIM39-208ENST00000428555 FAM236CP0DP71 79 aa5.16□□□□□ -1.58
TRIM39-208ENST00000428555 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.16□□□□□ -1.58
TRIM39-208ENST00000428555 C2orf91Q6ZV80 131 aa5.16□□□□□ -1.58
TRIM39-208ENST00000428555 RAB37Q96AX2 223 aa5.16□□□□□ -1.58
TRIM39-208ENST00000428555 IGLV8-61A0A075B6I0 122 aa5.14□□□□□ -1.59
TRIM39-208ENST00000428555 TCL1BO95988 128 aa5.14□□□□□ -1.59
TRIM39-208ENST00000428555 PCOTHQ58A44 107 aa5.14□□□□□ -1.59
TRIM39-208ENST00000428555 Q6JHZ5 121 aa5.14□□□□□ -1.59
TRIM39-208ENST00000428555 IGFL1Q6UW32 110 aa5.14□□□□□ -1.59
TRIM39-208ENST00000428555 A0A0B4J2C4 111 aa5.13□□□□□ -1.59
TRIM39-208ENST00000428555 C9JAW5 83 aa5.13□□□□□ -1.59
TRIM39-208ENST00000428555 PYY3Q5JQD4 70 aa5.13□□□□□ -1.59
TRIM39-208ENST00000428555 CEND1Q8N111 149 aa5.13□□□□□ -1.59
TRIM39-208ENST00000428555 H0YGX0 51 aa5.12□□□□□ -1.59
TRIM39-208ENST00000428555 FAM218AQ96MZ4 157 aa5.12□□□□□ -1.59
TRIM39-208ENST00000428555 ANAPC13Q9BS18 74 aa5.12□□□□□ -1.59
TRIM39-208ENST00000428555 TRBV7-7A0A0K0K1E9 115 aa5.11□□□□□ -1.59
TRIM39-208ENST00000428555 H3BUT2 72 aa5.11□□□□□ -1.59
TRIM39-208ENST00000428555 PPDPFLQ8WWR9 84 aa5.11□□□□□ -1.59
TRIM39-208ENST00000428555 CLEC2BQ92478 149 aa5.11□□□□□ -1.59
TRIM39-208ENST00000428555 PRO1854Q9UHT4 67 aa5.11□□□□□ -1.59
TRIM39-208ENST00000428555 SNCGO76070 127 aa5.1□□□□□ -1.59
TRIM39-208ENST00000428555 FXYD2P54710 66 aa5.1□□□□□ -1.59
TRIM39-208ENST00000428555 GTF2H5Q6ZYL4 71 aa5.09□□□□□ -1.59
TRIM39-208ENST00000428555 J3QR89 54 aa5.08□□□□□ -1.6
TRIM39-208ENST00000428555 NDUFV3P56181 108 aaKnown RBP5.08□□□□□ -1.6
TRIM39-208ENST00000428555 KRTAP9-2Q9BYQ4 174 aa5.07□□□□□ -1.6
TRIM39-208ENST00000428555 FABP2P12104 132 aa5.06□□□□□ -1.6
TRIM39-208ENST00000428555 RPL37P61927 97 aaKnown RBP5.06□□□□□ -1.6
TRIM39-208ENST00000428555 HSD52Q0P140 79 aa5.06□□□□□ -1.6
TRIM39-208ENST00000428555 C8orf87E5RJ46 101 aa5.05□□□□□ -1.6
TRIM39-208ENST00000428555 H3BMG7 143 aa5.05□□□□□ -1.6
TRIM39-208ENST00000428555 LST1O00453 97 aa5.05□□□□□ -1.6
TRIM39-208ENST00000428555 KRTAP19-2Q3LHN2 52 aa5.05□□□□□ -1.6
TRIM39-208ENST00000428555 K7ERJ3 54 aa5.04□□□□□ -1.6
TRIM39-208ENST00000428555 TEN1Q86WV5 123 aa5.04□□□□□ -1.6
TRIM39-208ENST00000428555 ANKRD29Q8N6D5 301 aa5.04□□□□□ -1.6
TRIM39-208ENST00000428555 C9orf118A6NHY6 69 aa5.03□□□□□ -1.6
TRIM39-208ENST00000428555 PSMB2P49721 201 aa5.03□□□□□ -1.6
TRIM39-208ENST00000428555 Q6Q795 121 aa5.03□□□□□ -1.6
TRIM39-208ENST00000428555 OBSCN-AS1Q96MR7 158 aa5.03□□□□□ -1.6
TRIM39-208ENST00000428555 UQCR10Q9UDW1 63 aa5.02□□□□□ -1.61
TRIM39-208ENST00000428555 A0A087WSZ3 146 aa5.01□□□□□ -1.61
TRIM39-208ENST00000428555 A0A1W2PNM2 257 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms