RNA–Protein interactions for RNA: ENST00000424354.5

SREBF2-202, Transcript of sterol regulatory element binding transcription factor 2, humanhuman

TSL 1 (best)

Gene SREBF2, Length 5,699 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF2-202ENST00000424354 J3QL48 77 aa9.11□□□□□ -0.95
SREBF2-202ENST00000424354 SETXQ7Z333 2677 aaKnown RBP9.11□□□□□ -0.95
SREBF2-202ENST00000424354 RELNP78509 3460 aa9.11□□□□□ -0.95
SREBF2-202ENST00000424354 PLA2G2DQ9UNK4 145 aa9.1□□□□□ -0.95
SREBF2-202ENST00000424354 SPANXA2-OT1Q8N9U9 137 aa9.09□□□□□ -0.95
SREBF2-202ENST00000424354 A0A1B0GVX0 72 aa9.09□□□□□ -0.95
SREBF2-202ENST00000424354 SSBP3-AS1Q7Z2R9 100 aa9.09□□□□□ -0.95
SREBF2-202ENST00000424354 C15orf56Q8N910 161 aa9.09□□□□□ -0.95
SREBF2-202ENST00000424354 CRYBG3Q68DQ2 2970 aa9.08□□□□□ -0.96
SREBF2-202ENST00000424354 LCA10Q71F78 164 aa9.08□□□□□ -0.96
SREBF2-202ENST00000424354 NBEAL1Q6ZS30 2694 aa9.07□□□□□ -0.96
SREBF2-202ENST00000424354 TLX1NBP0CAT3 122 aa9.07□□□□□ -0.96
SREBF2-202ENST00000424354 UTP20O75691 2785 aaKnown RBP9.07□□□□□ -0.96
SREBF2-202ENST00000424354 PLA2G1BP04054 148 aaKnown RBP9.07□□□□□ -0.96
SREBF2-202ENST00000424354 ASH1LQ9NR48 2969 aaKnown RBP9.07□□□□□ -0.96
SREBF2-202ENST00000424354 OBSCN-AS1Q96MR7 158 aa9.07□□□□□ -0.96
SREBF2-202ENST00000424354 NBEAL2Q6ZNJ1 2754 aa9.07□□□□□ -0.96
SREBF2-202ENST00000424354 C9orf129Q5T035 196 aaKnown RBP9.06□□□□□ -0.96
SREBF2-202ENST00000424354 LINC00612Q8N6U2 182 aa9.06□□□□□ -0.96
SREBF2-202ENST00000424354 WIPF1O43516 503 aa9.02□□□□□ -0.97
SREBF2-202ENST00000424354 DSCR10P59022 87 aa9.02□□□□□ -0.97
SREBF2-202ENST00000424354 CDC42SE1Q9NRR8 79 aa9.01□□□□□ -0.97
SREBF2-202ENST00000424354 GIG44P09565 113 aaPredicted RBP9□□□□□ -0.97
SREBF2-202ENST00000424354 CRIPTQ9P021 101 aa9□□□□□ -0.97
SREBF2-202ENST00000424354 A0A1W2PNM2 257 aa8.99□□□□□ -0.97
SREBF2-202ENST00000424354 DCHS2Q6V1P9 2916 aa8.99□□□□□ -0.97
SREBF2-202ENST00000424354 HRNRQ86YZ3 2850 aaPredicted RBP8.98□□□□□ -0.97
SREBF2-202ENST00000424354 NF1P21359 2839 aa8.98□□□□□ -0.97
SREBF2-202ENST00000424354 K7EIL1 84 aa8.98□□□□□ -0.97
SREBF2-202ENST00000424354 Q1T7F1 81 aa8.98□□□□□ -0.97
SREBF2-202ENST00000424354 C19orf73Q9NVV2 129 aa8.98□□□□□ -0.97
SREBF2-202ENST00000424354 ZNF861PO60384 105 aa8.97□□□□□ -0.97
SREBF2-202ENST00000424354 ZFHX4Q86UP3 3567 aa8.97□□□□□ -0.97
SREBF2-202ENST00000424354 IGLV5-48A0A075B6I7 105 aa8.96□□□□□ -0.97
SREBF2-202ENST00000424354 OCR1Q9BZK8 76 aa8.95□□□□□ -0.98
SREBF2-202ENST00000424354 KRTAP10-11P60412 298 aa8.94□□□□□ -0.98
SREBF2-202ENST00000424354 A0A0G2JQZ4 141 aa8.94□□□□□ -0.98
SREBF2-202ENST00000424354 A0A1W2PNN7 141 aa8.94□□□□□ -0.98
SREBF2-202ENST00000424354 CELSR2Q9HCU4 2923 aa8.93□□□□□ -0.98
SREBF2-202ENST00000424354 APCP25054 2843 aa8.93□□□□□ -0.98
SREBF2-202ENST00000424354 APLNQ9ULZ1 77 aa8.92□□□□□ -0.98
SREBF2-202ENST00000424354 C9orf163Q8N9P6 203 aa8.91□□□□□ -0.98
SREBF2-202ENST00000424354 IGLV5-37A0A075B6J1 123 aa8.9□□□□□ -0.98
SREBF2-202ENST00000424354 FAM104AQ969W3 186 aa8.89□□□□□ -0.99
SREBF2-202ENST00000424354 CR1P17927 2039 aa8.89□□□□□ -0.99
SREBF2-202ENST00000424354 BAHCC1Q9P281 2608 aa8.89□□□□□ -0.99
SREBF2-202ENST00000424354 KRTAP10-3P60369 221 aa8.88□□□□□ -0.99
SREBF2-202ENST00000424354 LINC00304Q8N9R0 145 aa8.88□□□□□ -0.99
SREBF2-202ENST00000424354 SPRR4Q96PI1 79 aa8.88□□□□□ -0.99
SREBF2-202ENST00000424354 FBN2P35556 2912 aa8.88□□□□□ -0.99
SREBF2-202ENST00000424354 ZNF575Q86XF7 245 aa8.87□□□□□ -0.99
SREBF2-202ENST00000424354 NSD1Q96L73 2696 aaPredicted RBP8.87□□□□□ -0.99
SREBF2-202ENST00000424354 CNBPP62633 177 aaKnown RBP8.86□□□□□ -0.99
SREBF2-202ENST00000424354 COX6B2Q6YFQ2 88 aa8.86□□□□□ -0.99
SREBF2-202ENST00000424354 A0A087WTM6 91 aa8.83□□□□□ -1
SREBF2-202ENST00000424354 IGLV7-43P04211 117 aa8.82□□□□□ -1
SREBF2-202ENST00000424354 Q75L30 129 aa8.82□□□□□ -1
SREBF2-202ENST00000424354 IGLV7-46A0A075B6I9 117 aa8.82□□□□□ -1
SREBF2-202ENST00000424354 HIVEP1P15822 2718 aa8.81□□□□□ -1
SREBF2-202ENST00000424354 SMR3BP02814 79 aaPredicted RBP8.8□□□□□ -1
SREBF2-202ENST00000424354 Q5XG85 94 aa8.8□□□□□ -1
SREBF2-202ENST00000424354 PSORS1C2Q9UIG4 136 aa8.79□□□□□ -1
SREBF2-202ENST00000424354 ANAPC11Q9NYG5 84 aa8.78□□□□□ -1
SREBF2-202ENST00000424354 C9orf92A6NGG3 77 aa8.77□□□□□ -1.01
SREBF2-202ENST00000424354 NIPBLQ6KC79 2804 aaeCLIP8.77□□□□□ -1.01
SREBF2-202ENST00000424354 PRR26Q8N8Z3 221 aa8.76□□□□□ -1.01
SREBF2-202ENST00000424354 CASC10Q5T4H9 136 aa8.76□□□□□ -1.01
SREBF2-202ENST00000424354 MXRA5Q9NR99 2828 aa8.75□□□□□ -1.01
SREBF2-202ENST00000424354 RBM12B-AS1Q9P1G2 102 aa8.74□□□□□ -1.01
SREBF2-202ENST00000424354 Q8N1X5 172 aa8.74□□□□□ -1.01
SREBF2-202ENST00000424354 LINC01558Q9Y6Z2 57 aa8.73□□□□□ -1.01
SREBF2-202ENST00000424354 FP248Q71RG6 208 aaPredicted RBP8.71□□□□□ -1.01
SREBF2-202ENST00000424354 Q8N9P0 234 aaPredicted RBP8.7□□□□□ -1.02
SREBF2-202ENST00000424354 FAM229BQ4G0N7 80 aa8.69□□□□□ -1.02
SREBF2-202ENST00000424354 A0A0D9SG42 100 aa8.69□□□□□ -1.02
SREBF2-202ENST00000424354 SMG1Q96Q15 3661 aaKnown RBP8.69□□□□□ -1.02
SREBF2-202ENST00000424354 CYSTM1Q9H1C7 97 aa8.67□□□□□ -1.02
SREBF2-202ENST00000424354 KMT2BQ9UMN6 2715 aaPredicted RBP8.67□□□□□ -1.02
SREBF2-202ENST00000424354 HRES1P13985 223 aa8.66□□□□□ -1.02
SREBF2-202ENST00000424354 LINC01554Q52M75 96 aa8.65□□□□□ -1.02
SREBF2-202ENST00000424354 CELSR1Q9NYQ6 3014 aa8.64□□□□□ -1.03
SREBF2-202ENST00000424354 MMP24-AS1A0A0U1RRL7 71 aa8.64□□□□□ -1.03
SREBF2-202ENST00000424354 A0A1B0GU33 70 aa8.64□□□□□ -1.03
SREBF2-202ENST00000424354 LUZP6Q538Z0 58 aa8.63□□□□□ -1.03
SREBF2-202ENST00000424354 Q5VV11 94 aa8.61□□□□□ -1.03
SREBF2-202ENST00000424354 SPRR1AP35321 89 aa8.6□□□□□ -1.03
SREBF2-202ENST00000424354 Q8NDZ9 215 aa8.57□□□□□ -1.04
SREBF2-202ENST00000424354 CSMD1Q96PZ7 3565 aa8.55□□□□□ -1.04
SREBF2-202ENST00000424354 SPRR1BP22528 89 aa8.53□□□□□ -1.04
SREBF2-202ENST00000424354 TNP2Q05952 138 aa8.52□□□□□ -1.04
SREBF2-202ENST00000424354 SVEP1Q4LDE5 3571 aa8.52□□□□□ -1.05
SREBF2-202ENST00000424354 PRAC1Q96KF2 57 aa8.52□□□□□ -1.05
SREBF2-202ENST00000424354 LINC00472Q9H8W2 130 aa8.52□□□□□ -1.05
SREBF2-202ENST00000424354 DMAC1Q96GE9 116 aa8.51□□□□□ -1.05
SREBF2-202ENST00000424354 OXTP01178 125 aa8.51□□□□□ -1.05
SREBF2-202ENST00000424354 STAB2Q8WWQ8 2551 aa8.51□□□□□ -1.05
SREBF2-202ENST00000424354 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.5□□□□□ -1.05
SREBF2-202ENST00000424354 ZCCHC13Q8WW36 166 aaKnown RBP8.49□□□□□ -1.05
SREBF2-202ENST00000424354 SPINK7P58062 85 aa8.49□□□□□ -1.05
SREBF2-202ENST00000424354 H3BS24 57 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms