RNA–Protein interactions for RNA: ENST00000423613.6

TNC-203, Transcript of tenascin C, humanhuman

TSL 1 (best) BASIC

Gene TNC, Length 6,281 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-203ENST00000423613 ADM2Q7Z4H4 148 aa6.8□□□□□ -1.32
TNC-203ENST00000423613 C20orf166-AS1Q96NR2 134 aa6.8□□□□□ -1.32
TNC-203ENST00000423613 CR1P17927 2039 aa6.78□□□□□ -1.32
TNC-203ENST00000423613 EPG5Q9HCE0 2579 aa6.78□□□□□ -1.32
TNC-203ENST00000423613 USP24Q9UPU5 2620 aa6.76□□□□□ -1.33
TNC-203ENST00000423613 M0QZ58 72 aa6.75□□□□□ -1.33
TNC-203ENST00000423613 Q8NDZ9 215 aa6.74□□□□□ -1.33
TNC-203ENST00000423613 MGAM2Q2M2H8 2515 aa6.74□□□□□ -1.33
TNC-203ENST00000423613 BPTFQ12830 3046 aa6.74□□□□□ -1.33
TNC-203ENST00000423613 HECTD1Q9ULT8 2610 aa6.73□□□□□ -1.33
TNC-203ENST00000423613 PLAC8Q9NZF1 115 aa6.71□□□□□ -1.34
TNC-203ENST00000423613 PRRC2CQ9Y520 2896 aaKnown RBP6.7□□□□□ -1.34
TNC-203ENST00000423613 LCE6AA0A183 80 aa6.7□□□□□ -1.34
TNC-203ENST00000423613 LINC00472Q9H8W2 130 aa6.68□□□□□ -1.34
TNC-203ENST00000423613 SPRR1AP35321 89 aa6.68□□□□□ -1.34
TNC-203ENST00000423613 C5orf42Q9H799 3197 aa6.67□□□□□ -1.34
TNC-203ENST00000423613 FLNBO75369 2602 aaKnown RBP6.66□□□□□ -1.34
TNC-203ENST00000423613 A8MU10 97 aa6.66□□□□□ -1.34
TNC-203ENST00000423613 KRTAP26-1Q6PEX3 210 aa6.65□□□□□ -1.35
TNC-203ENST00000423613 KRTAP10-1P60331 282 aa6.62□□□□□ -1.35
TNC-203ENST00000423613 FLNAP21333 2647 aaKnown RBP6.61□□□□□ -1.35
TNC-203ENST00000423613 SPRR1BP22528 89 aa6.61□□□□□ -1.35
TNC-203ENST00000423613 CEP350Q5VT06 3117 aa6.6□□□□□ -1.35
TNC-203ENST00000423613 Q6ZR54 194 aa6.6□□□□□ -1.35
TNC-203ENST00000423613 KRTAP10-2P60368 255 aa6.59□□□□□ -1.35
TNC-203ENST00000423613 C10orf95Q9H7T3 257 aa6.58□□□□□ -1.36
TNC-203ENST00000423613 KRTAP1-5Q9BYS1 174 aa6.57□□□□□ -1.36
TNC-203ENST00000423613 PANO1I0J062 215 aa6.56□□□□□ -1.36
TNC-203ENST00000423613 ITPR3Q14573 2671 aa6.55□□□□□ -1.36
TNC-203ENST00000423613 A8MUU9 505 aa6.54□□□□□ -1.36
TNC-203ENST00000423613 ATRQ13535 2644 aa6.54□□□□□ -1.36
TNC-203ENST00000423613 PCNTO95613 3336 aa6.51□□□□□ -1.37
TNC-203ENST00000423613 MAST4O15021 2626 aa6.48□□□□□ -1.37
TNC-203ENST00000423613 KRTAP29-1A8MX34 341 aaPredicted RBP6.47□□□□□ -1.37
TNC-203ENST00000423613 HELZ2Q9BYK8 2649 aaKnown RBP6.44□□□□□ -1.38
TNC-203ENST00000423613 KRTAP4-16G5E9R7 235 aaPredicted RBP6.41□□□□□ -1.38
TNC-203ENST00000423613 A0A087X002 238 aa6.4□□□□□ -1.39
TNC-203ENST00000423613 NOTCH2NLQ7Z3S9 236 aa6.4□□□□□ -1.39
TNC-203ENST00000423613 CHD7Q9P2D1 2997 aa6.4□□□□□ -1.39
TNC-203ENST00000423613 CFAP54Q96N23 3096 aa6.39□□□□□ -1.39
TNC-203ENST00000423613 KRTAP11-1Q8IUC1 163 aa6.39□□□□□ -1.39
TNC-203ENST00000423613 CFAP46Q8IYW2 2715 aa6.38□□□□□ -1.39
TNC-203ENST00000423613 MKI67P46013 3256 aaKnown RBP6.34□□□□□ -1.4
TNC-203ENST00000423613 AKAP13Q12802 2813 aa6.33□□□□□ -1.4
TNC-203ENST00000423613 STAB1Q9NY15 2570 aa6.33□□□□□ -1.4
TNC-203ENST00000423613 CHD6Q8TD26 2715 aa6.32□□□□□ -1.4
TNC-203ENST00000423613 CENPEQ02224 2701 aa6.31□□□□□ -1.4
TNC-203ENST00000423613 NBEAL1Q6ZS30 2694 aa6.28□□□□□ -1.4
TNC-203ENST00000423613 TNP1P09430 55 aa6.28□□□□□ -1.4
TNC-203ENST00000423613 FLG2Q5D862 2391 aaPredicted RBP6.28□□□□□ -1.4
TNC-203ENST00000423613 XIRP2A4UGR9 3374 aa6.27□□□□□ -1.41
TNC-203ENST00000423613 A0A0C4DFX4 3053 aa6.26□□□□□ -1.41
TNC-203ENST00000423613 CHD9Q3L8U1 2897 aa6.26□□□□□ -1.41
TNC-203ENST00000423613 TEX15Q9BXT5 2789 aa6.25□□□□□ -1.41
TNC-203ENST00000423613 GCN1Q92616 2671 aaKnown RBP6.23□□□□□ -1.41
TNC-203ENST00000423613 MGAQ8IWI9 3026 aa6.22□□□□□ -1.41
TNC-203ENST00000423613 UNC79Q9P2D8 2635 aa6.21□□□□□ -1.41
TNC-203ENST00000423613 TEP1Q99973 2627 aaKnown RBP6.21□□□□□ -1.42
TNC-203ENST00000423613 BRCA2P51587 3418 aa6.2□□□□□ -1.42
TNC-203ENST00000423613 LAMA3Q16787 3333 aa6.2□□□□□ -1.42
TNC-203ENST00000423613 KRTAP7-1Q8IUC3 87 aa6.2□□□□□ -1.42
TNC-203ENST00000423613 TRIOO75962 3097 aa6.19□□□□□ -1.42
TNC-203ENST00000423613 LAMA2P24043 3122 aaKnown RBP6.18□□□□□ -1.42
TNC-203ENST00000423613 DMBT1Q9UGM3 2413 aaPredicted RBP6.18□□□□□ -1.42
TNC-203ENST00000423613 Q6ZRN7 208 aaPredicted RBP6.17□□□□□ -1.42
TNC-203ENST00000423613 P0C880 135 aa6.17□□□□□ -1.42
TNC-203ENST00000423613 PP632Q6XCG6 107 aa6.15□□□□□ -1.42
TNC-203ENST00000423613 KRTAP10-8P60410 259 aa6.15□□□□□ -1.42
TNC-203ENST00000423613 CELSR3Q9NYQ7 3312 aa6.15□□□□□ -1.43
TNC-203ENST00000423613 RPS29P62273 56 aaKnown RBP6.15□□□□□ -1.43
TNC-203ENST00000423613 FREM2Q5SZK8 3169 aa6.14□□□□□ -1.43
TNC-203ENST00000423613 HTTP42858 3142 aa6.14□□□□□ -1.43
TNC-203ENST00000423613 NOTCH1P46531 2555 aa6.14□□□□□ -1.43
TNC-203ENST00000423613 RANBP2P49792 3224 aaKnown RBP6.14□□□□□ -1.43
TNC-203ENST00000423613 COL6A5A8TX70 2615 aa6.13□□□□□ -1.43
TNC-203ENST00000423613 KRTAP13-2Q52LG2 175 aa6.13□□□□□ -1.43
TNC-203ENST00000423613 DNAH14Q0VDD8 3507 aa6.12□□□□□ -1.43
TNC-203ENST00000423613 A0A1B0GVY2 172 aa6.12□□□□□ -1.43
TNC-203ENST00000423613 SZT2Q5T011 3432 aa6.12□□□□□ -1.43
TNC-203ENST00000423613 NBEAL2Q6ZNJ1 2754 aa6.12□□□□□ -1.43
TNC-203ENST00000423613 WDFY4Q6ZS81 3184 aa6.11□□□□□ -1.43
TNC-203ENST00000423613 PRUNE2Q8WUY3 3088 aa6.11□□□□□ -1.43
TNC-203ENST00000423613 KRTAP13-1Q8IUC0 172 aa6.1□□□□□ -1.43
TNC-203ENST00000423613 ZNF292O60281 2723 aa6.09□□□□□ -1.43
TNC-203ENST00000423613 SETXQ7Z333 2677 aaKnown RBP6.08□□□□□ -1.44
TNC-203ENST00000423613 H0YAA0 97 aa6.08□□□□□ -1.44
TNC-203ENST00000423613 TRANK1O15050 2925 aa6.07□□□□□ -1.44
TNC-203ENST00000423613 UNC80Q8N2C7 3258 aa6.06□□□□□ -1.44
TNC-203ENST00000423613 STAB2Q8WWQ8 2551 aa6.04□□□□□ -1.44
TNC-203ENST00000423613 CDH23Q9H251 3354 aa6.03□□□□□ -1.44
TNC-203ENST00000423613 FRYQ5TBA9 3013 aa6.02□□□□□ -1.45
TNC-203ENST00000423613 UBR5O95071 2799 aaPredicted RBP5.99□□□□□ -1.45
TNC-203ENST00000423613 IGSF10Q6WRI0 2623 aa5.98□□□□□ -1.45
TNC-203ENST00000423613 KRTAP21-3Q3LHN1 58 aa5.98□□□□□ -1.45
TNC-203ENST00000423613 DSPP15924 2871 aaKnown RBP5.98□□□□□ -1.45
TNC-203ENST00000423613 VPS13AQ96RL7 3174 aa5.98□□□□□ -1.45
TNC-203ENST00000423613 KRTAP10-10P60014 251 aa5.96□□□□□ -1.46
TNC-203ENST00000423613 MAP1AP78559 2803 aaPredicted RBP5.96□□□□□ -1.46
TNC-203ENST00000423613 NSD1Q96L73 2696 aaPredicted RBP5.92□□□□□ -1.46
TNC-203ENST00000423613 COL6A3P12111 3177 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms