RNA–Protein interactions for RNA: ENST00000417702.5

NUP50-204, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 584 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-204ENST00000417702 hADV29S1A0JD25 119 aa8.58□□□□□ -1.04
NUP50-204ENST00000417702 HRCT1Q6UXD1 115 aa8.58□□□□□ -1.04
NUP50-204ENST00000417702 IGLV5-48A0A075B6I7 105 aa8.57□□□□□ -1.04
NUP50-204ENST00000417702 LOC105371267A0A1B0GV96 52 aa8.57□□□□□ -1.04
NUP50-204ENST00000417702 MUC2Q02817 5179 aa8.57□□□□□ -1.04
NUP50-204ENST00000417702 H0YGX0 51 aa8.56□□□□□ -1.04
NUP50-204ENST00000417702 SNCGO76070 127 aa8.55□□□□□ -1.04
NUP50-204ENST00000417702 LINC01547P58512 204 aaPredicted RBP8.55□□□□□ -1.04
NUP50-204ENST00000417702 CD164Q04900 197 aa8.55□□□□□ -1.04
NUP50-204ENST00000417702 SMIM29Q86T20 159 aa8.54□□□□□ -1.04
NUP50-204ENST00000417702 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.53□□□□□ -1.04
NUP50-204ENST00000417702 Q6ZQY7 126 aa8.53□□□□□ -1.04
NUP50-204ENST00000417702 K7ERJ3 54 aa8.51□□□□□ -1.05
NUP50-204ENST00000417702 SEC61BP60468 96 aaKnown RBP8.51□□□□□ -1.05
NUP50-204ENST00000417702 ASB16-AS1Q495Z4 193 aa8.51□□□□□ -1.05
NUP50-204ENST00000417702 TSTD3H0UI37 97 aa8.5□□□□□ -1.05
NUP50-204ENST00000417702 F8WEM9 126 aa8.49□□□□□ -1.05
NUP50-204ENST00000417702 M0R143 59 aa8.49□□□□□ -1.05
NUP50-204ENST00000417702 TRIAP1O43715 76 aa8.49□□□□□ -1.05
NUP50-204ENST00000417702 PSMB2P49721 201 aa8.49□□□□□ -1.05
NUP50-204ENST00000417702 MUC17Q685J3 4493 aa8.48□□□□□ -1.05
NUP50-204ENST00000417702 A0A1B0GX51 115 aa8.48□□□□□ -1.05
NUP50-204ENST00000417702 COX6CP09669 75 aa8.48□□□□□ -1.05
NUP50-204ENST00000417702 PPDPFLQ8WWR9 84 aa8.48□□□□□ -1.05
NUP50-204ENST00000417702 OCIAD2Q56VL3 154 aa8.47□□□□□ -1.05
NUP50-204ENST00000417702 FAM218AQ96MZ4 157 aa8.47□□□□□ -1.05
NUP50-204ENST00000417702 XP32Q5T750 250 aa8.46□□□□□ -1.06
NUP50-204ENST00000417702 Q5XG85 94 aa8.46□□□□□ -1.06
NUP50-204ENST00000417702 A0A0G2JQZ4 141 aa8.45□□□□□ -1.06
NUP50-204ENST00000417702 GHRHP01286 108 aa8.45□□□□□ -1.06
NUP50-204ENST00000417702 SNHG12Q9BXW3 62 aa8.44□□□□□ -1.06
NUP50-204ENST00000417702 CLEC2BQ92478 149 aa8.42□□□□□ -1.06
NUP50-204ENST00000417702 FAT4Q6V0I7 4981 aa8.41□□□□□ -1.06
NUP50-204ENST00000417702 TCL1BO95988 128 aa8.41□□□□□ -1.06
NUP50-204ENST00000417702 DNAL4O96015 105 aa8.41□□□□□ -1.06
NUP50-204ENST00000417702 SCGB1C2P0DMR2 95 aa8.41□□□□□ -1.06
NUP50-204ENST00000417702 Q6JHZ5 121 aa8.41□□□□□ -1.06
NUP50-204ENST00000417702 C9orf92A6NGG3 77 aa8.4□□□□□ -1.06
NUP50-204ENST00000417702 C1orf195Q5TG92 126 aa8.4□□□□□ -1.06
NUP50-204ENST00000417702 IGLV8-61A0A075B6I0 122 aa8.39□□□□□ -1.07
NUP50-204ENST00000417702 H3BQ85 93 aa8.37□□□□□ -1.07
NUP50-204ENST00000417702 FABP2P12104 132 aa8.37□□□□□ -1.07
NUP50-204ENST00000417702 LCE2AQ5TA79 106 aaPredicted RBP8.37□□□□□ -1.07
NUP50-204ENST00000417702 ORMDL1Q9P0S3 153 aa8.37□□□□□ -1.07
NUP50-204ENST00000417702 KRTAP4-1Q9BYQ7 146 aa8.36□□□□□ -1.07
NUP50-204ENST00000417702 NDUFV3P56181 108 aaKnown RBP8.35□□□□□ -1.07
NUP50-204ENST00000417702 BATFQ16520 125 aa8.35□□□□□ -1.07
NUP50-204ENST00000417702 IGFL1Q6UW32 110 aa8.35□□□□□ -1.07
NUP50-204ENST00000417702 TRBV7-7A0A0K0K1E9 115 aa8.34□□□□□ -1.07
NUP50-204ENST00000417702 LST1O00453 97 aa8.34□□□□□ -1.07
NUP50-204ENST00000417702 TRACP01848 142 aa8.34□□□□□ -1.07
NUP50-204ENST00000417702 H3BUT2 72 aa8.33□□□□□ -1.08
NUP50-204ENST00000417702 TMEM256-PLSCR3K7ERE1 68 aa8.32□□□□□ -1.08
NUP50-204ENST00000417702 PCOTHQ58A44 107 aa8.32□□□□□ -1.08
NUP50-204ENST00000417702 H3BMG7 143 aa8.31□□□□□ -1.08
NUP50-204ENST00000417702 NAA38Q9BRA0 125 aaKnown RBP8.3□□□□□ -1.08
NUP50-204ENST00000417702 LYRM7Q5U5X0 104 aa8.29□□□□□ -1.08
NUP50-204ENST00000417702 ATXN8Q156A1 80 aa8.28□□□□□ -1.08
NUP50-204ENST00000417702 UBE2V1Q13404 147 aa8.27□□□□□ -1.09
NUP50-204ENST00000417702 Q6Q795 121 aa8.25□□□□□ -1.09
NUP50-204ENST00000417702 TEN1Q86WV5 123 aa8.25□□□□□ -1.09
NUP50-204ENST00000417702 RPL37P61927 97 aaKnown RBP8.24□□□□□ -1.09
NUP50-204ENST00000417702 ANKRD29Q8N6D5 301 aa8.24□□□□□ -1.09
NUP50-204ENST00000417702 TRBV20-1A0A075B6N2 111 aa8.23□□□□□ -1.09
NUP50-204ENST00000417702 C9orf118A6NHY6 69 aa8.23□□□□□ -1.09
NUP50-204ENST00000417702 BAALC-AS2P0C853 105 aa8.23□□□□□ -1.09
NUP50-204ENST00000417702 SS18L2Q9UHA2 77 aa8.23□□□□□ -1.09
NUP50-204ENST00000417702 A0A1B0GV72 72 aa8.22□□□□□ -1.09
NUP50-204ENST00000417702 TAX1BP3O14907 124 aa8.22□□□□□ -1.09
NUP50-204ENST00000417702 RBM3P98179 157 aaKnown RBP8.19□□□□□ -1.1
NUP50-204ENST00000417702 A0A1W2PNM2 257 aa8.18□□□□□ -1.1
NUP50-204ENST00000417702 A0A1W2PPM0 123 aa8.18□□□□□ -1.1
NUP50-204ENST00000417702 A0A087WSZ3 146 aa8.17□□□□□ -1.1
NUP50-204ENST00000417702 OBSCN-AS1Q96MR7 158 aa8.17□□□□□ -1.1
NUP50-204ENST00000417702 DSCR8Q96T75 97 aa8.17□□□□□ -1.1
NUP50-204ENST00000417702 TRBV7-4A0A0J9YYF1 115 aa8.16□□□□□ -1.1
NUP50-204ENST00000417702 COL5A1-AS1Q5SY13 56 aa8.16□□□□□ -1.1
NUP50-204ENST00000417702 KRTAP9-2Q9BYQ4 174 aa8.16□□□□□ -1.1
NUP50-204ENST00000417702 CCKP06307 115 aa8.15□□□□□ -1.1
NUP50-204ENST00000417702 PCP4L1A6NKN8 68 aa8.14□□□□□ -1.11
NUP50-204ENST00000417702 C9JAW5 83 aa8.14□□□□□ -1.11
NUP50-204ENST00000417702 JMJD7-PLA2G4BH0Y9G9 81 aa8.14□□□□□ -1.11
NUP50-204ENST00000417702 LCE2CQ5TA81 110 aa8.14□□□□□ -1.11
NUP50-204ENST00000417702 KRTAP19-2Q3LHN2 52 aa8.12□□□□□ -1.11
NUP50-204ENST00000417702 ATP11AUNQ6ZP68 121 aa8.12□□□□□ -1.11
NUP50-204ENST00000417702 Q75L30 129 aa8.12□□□□□ -1.11
NUP50-204ENST00000417702 Q96NJ1 140 aa8.11□□□□□ -1.11
NUP50-204ENST00000417702 VPS25Q9BRG1 176 aa8.11□□□□□ -1.11
NUP50-204ENST00000417702 H3BT86 120 aa8.09□□□□□ -1.11
NUP50-204ENST00000417702 SPCS1Q9Y6A9 102 aa8.09□□□□□ -1.11
NUP50-204ENST00000417702 C21orf62-AS1Q17RA5 79 aa8.08□□□□□ -1.12
NUP50-204ENST00000417702 PDE6GP18545 87 aa8.07□□□□□ -1.12
NUP50-204ENST00000417702 COX6B2Q6YFQ2 88 aa8.07□□□□□ -1.12
NUP50-204ENST00000417702 LOC110117498A0A087WWA1 95 aa8.06□□□□□ -1.12
NUP50-204ENST00000417702 MT1HP80294 61 aa8.06□□□□□ -1.12
NUP50-204ENST00000417702 SIGMAR1Q99720 223 aa8.06□□□□□ -1.12
NUP50-204ENST00000417702 Q6ZQT0 140 aa8.05□□□□□ -1.12
NUP50-204ENST00000417702 MTURNQ8N3F0 131 aa8.04□□□□□ -1.12
NUP50-204ENST00000417702 C14orf132Q9NPU4 83 aa8.04□□□□□ -1.12
NUP50-204ENST00000417702 A0A1B0GW54 56 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms