RNA–Protein interactions for RNA: ENST00000417448.1

VCP-202, Transcript of valosin containing protein, humanhuman

TSL 3

Gene VCP, Length 722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-202ENST00000417448 SLC25A20O43772 301 aa10.2□□□□□ -0.78
VCP-202ENST00000417448 TEX49A0A1B0GTD5 131 aa10.19□□□□□ -0.78
VCP-202ENST00000417448 BVES-AS1Q5T3Y7 98 aa10.19□□□□□ -0.78
VCP-202ENST00000417448 SMIM29Q86T20 159 aa10.19□□□□□ -0.78
VCP-202ENST00000417448 Q8N377 158 aa10.19□□□□□ -0.78
VCP-202ENST00000417448 CTAG1AP78358 180 aa10.18□□□□□ -0.78
VCP-202ENST00000417448 C4orf48Q5BLP8 95 aa10.18□□□□□ -0.78
VCP-202ENST00000417448 Q6ZQY7 126 aa10.18□□□□□ -0.78
VCP-202ENST00000417448 SSBP3-AS1Q7Z2R9 100 aa10.18□□□□□ -0.78
VCP-202ENST00000417448 LAMTOR3Q9UHA4 124 aa10.18□□□□□ -0.78
VCP-202ENST00000417448 IGLV5-48A0A075B6I7 105 aa10.17□□□□□ -0.78
VCP-202ENST00000417448 A0A0G2JQZ4 141 aa10.17□□□□□ -0.78
VCP-202ENST00000417448 FAM218AQ96MZ4 157 aa10.17□□□□□ -0.78
VCP-202ENST00000417448 HRCT1Q6UXD1 115 aa10.15□□□□□ -0.78
VCP-202ENST00000417448 TRIAP1O43715 76 aa10.14□□□□□ -0.79
VCP-202ENST00000417448 ASB16-AS1Q495Z4 193 aa10.13□□□□□ -0.79
VCP-202ENST00000417448 SPAG11AQ6PDA7 123 aa10.13□□□□□ -0.79
VCP-202ENST00000417448 CLEC2BQ92478 149 aa10.12□□□□□ -0.79
VCP-202ENST00000417448 PSMB2P49721 201 aa10.11□□□□□ -0.79
VCP-202ENST00000417448 H0YGX0 51 aa10.1□□□□□ -0.79
VCP-202ENST00000417448 LCE2CQ5TA81 110 aa10.1□□□□□ -0.79
VCP-202ENST00000417448 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.09□□□□□ -0.79
VCP-202ENST00000417448 SPINK1P00995 79 aa10.08□□□□□ -0.8
VCP-202ENST00000417448 TSTD3H0UI37 97 aa10.06□□□□□ -0.8
VCP-202ENST00000417448 KRTAP13-3Q3SY46 172 aa10.05□□□□□ -0.8
VCP-202ENST00000417448 NAA38Q9BRA0 125 aaKnown RBP10.05□□□□□ -0.8
VCP-202ENST00000417448 F8WEM9 126 aa10.02□□□□□ -0.81
VCP-202ENST00000417448 M0R143 59 aa10.02□□□□□ -0.81
VCP-202ENST00000417448 BATFQ16520 125 aa10.02□□□□□ -0.81
VCP-202ENST00000417448 SNHG12Q9BXW3 62 aa10.02□□□□□ -0.81
VCP-202ENST00000417448 H3BUT2 72 aa10.01□□□□□ -0.81
VCP-202ENST00000417448 SNCGO76070 127 aa10□□□□□ -0.81
VCP-202ENST00000417448 KRTAP19-2Q3LHN2 52 aa10□□□□□ -0.81
VCP-202ENST00000417448 OCIAD2Q56VL3 154 aa10□□□□□ -0.81
VCP-202ENST00000417448 KRTAP9-7A8MTY7 169 aa9.99□□□□□ -0.81
VCP-202ENST00000417448 SCGB1C2P0DMR2 95 aa9.99□□□□□ -0.81
VCP-202ENST00000417448 MT1HP80294 61 aa9.99□□□□□ -0.81
VCP-202ENST00000417448 FP248Q71RG6 208 aaPredicted RBP9.99□□□□□ -0.81
VCP-202ENST00000417448 COX6CP09669 75 aa9.98□□□□□ -0.81
VCP-202ENST00000417448 FABP2P12104 132 aa9.98□□□□□ -0.81
VCP-202ENST00000417448 A0A1B0GX51 115 aa9.97□□□□□ -0.81
VCP-202ENST00000417448 SEC61BP60468 96 aaKnown RBP9.97□□□□□ -0.81
VCP-202ENST00000417448 IGFL1Q6UW32 110 aa9.97□□□□□ -0.81
VCP-202ENST00000417448 RPS29P62273 56 aaKnown RBP9.96□□□□□ -0.82
VCP-202ENST00000417448 A0A1B0GV72 72 aa9.95□□□□□ -0.82
VCP-202ENST00000417448 NDUFV3P56181 108 aaKnown RBP9.95□□□□□ -0.82
VCP-202ENST00000417448 PPDPFLQ8WWR9 84 aa9.95□□□□□ -0.82
VCP-202ENST00000417448 IGLV8-61A0A075B6I0 122 aa9.94□□□□□ -0.82
VCP-202ENST00000417448 LORP23490 312 aaPredicted RBP9.94□□□□□ -0.82
VCP-202ENST00000417448 CD164Q04900 197 aa9.94□□□□□ -0.82
VCP-202ENST00000417448 DNAL4O96015 105 aa9.93□□□□□ -0.82
VCP-202ENST00000417448 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.92□□□□□ -0.82
VCP-202ENST00000417448 LST1O00453 97 aa9.91□□□□□ -0.82
VCP-202ENST00000417448 Q6JHZ5 121 aa9.91□□□□□ -0.82
VCP-202ENST00000417448 LIMD2Q9BT23 127 aa9.91□□□□□ -0.82
VCP-202ENST00000417448 ORMDL1Q9P0S3 153 aa9.91□□□□□ -0.82
VCP-202ENST00000417448 H3BMG7 143 aa9.89□□□□□ -0.83
VCP-202ENST00000417448 KRTAP10-6P60371 365 aaPredicted RBP9.89□□□□□ -0.83
VCP-202ENST00000417448 TCL1BO95988 128 aa9.88□□□□□ -0.83
VCP-202ENST00000417448 TRACP01848 142 aa9.87□□□□□ -0.83
VCP-202ENST00000417448 C1orf195Q5TG92 126 aa9.86□□□□□ -0.83
VCP-202ENST00000417448 TRBV7-7A0A0K0K1E9 115 aa9.85□□□□□ -0.83
VCP-202ENST00000417448 TAX1BP3O14907 124 aa9.83□□□□□ -0.84
VCP-202ENST00000417448 GHRHP01286 108 aa9.83□□□□□ -0.84
VCP-202ENST00000417448 TMEM256-PLSCR3K7ERE1 68 aa9.82□□□□□ -0.84
VCP-202ENST00000417448 BAALC-AS2P0C853 105 aa9.82□□□□□ -0.84
VCP-202ENST00000417448 XP32Q5T750 250 aa9.82□□□□□ -0.84
VCP-202ENST00000417448 Q5XG85 94 aa9.82□□□□□ -0.84
VCP-202ENST00000417448 ATXN8Q156A1 80 aa9.81□□□□□ -0.84
VCP-202ENST00000417448 C9orf92A6NGG3 77 aa9.8□□□□□ -0.84
VCP-202ENST00000417448 A0A1W2PNM2 257 aa9.79□□□□□ -0.84
VCP-202ENST00000417448 C9orf118A6NHY6 69 aa9.79□□□□□ -0.84
VCP-202ENST00000417448 PCP4L1A6NKN8 68 aa9.79□□□□□ -0.84
VCP-202ENST00000417448 ANKRD29Q8N6D5 301 aa9.78□□□□□ -0.84
VCP-202ENST00000417448 H3BQ85 93 aa9.77□□□□□ -0.85
VCP-202ENST00000417448 UBE2V1Q13404 147 aa9.77□□□□□ -0.85
VCP-202ENST00000417448 TEN1Q86WV5 123 aa9.77□□□□□ -0.85
VCP-202ENST00000417448 A0A087WSZ3 146 aa9.75□□□□□ -0.85
VCP-202ENST00000417448 Q6Q795 121 aa9.75□□□□□ -0.85
VCP-202ENST00000417448 FLGP20930 4061 aaPredicted RBP9.75□□□□□ -0.85
VCP-202ENST00000417448 A0A1W2PPM0 123 aa9.74□□□□□ -0.85
VCP-202ENST00000417448 C9JAW5 83 aa9.72□□□□□ -0.85
VCP-202ENST00000417448 MTURNQ8N3F0 131 aa9.72□□□□□ -0.85
VCP-202ENST00000417448 RBM3P98179 157 aaKnown RBP9.71□□□□□ -0.86
VCP-202ENST00000417448 LYRM7Q5U5X0 104 aa9.71□□□□□ -0.86
VCP-202ENST00000417448 VPS25Q9BRG1 176 aa9.71□□□□□ -0.86
VCP-202ENST00000417448 TRBV20-1A0A075B6N2 111 aa9.7□□□□□ -0.86
VCP-202ENST00000417448 CCKP06307 115 aa9.7□□□□□ -0.86
VCP-202ENST00000417448 TRBV7-4A0A0J9YYF1 115 aa9.68□□□□□ -0.86
VCP-202ENST00000417448 M0R2T5 61 aa9.67□□□□□ -0.86
VCP-202ENST00000417448 PCOTHQ58A44 107 aa9.67□□□□□ -0.86
VCP-202ENST00000417448 COL5A1-AS1Q5SY13 56 aa9.67□□□□□ -0.86
VCP-202ENST00000417448 Q96NJ1 140 aa9.66□□□□□ -0.86
VCP-202ENST00000417448 DSCR8Q96T75 97 aa9.66□□□□□ -0.86
VCP-202ENST00000417448 SS18L2Q9UHA2 77 aa9.66□□□□□ -0.86
VCP-202ENST00000417448 SSPOA2VEC9 5147 aa9.65□□□□□ -0.86
VCP-202ENST00000417448 DEFB116Q30KQ4 102 aa9.64□□□□□ -0.87
VCP-202ENST00000417448 SPCS1Q9Y6A9 102 aa9.63□□□□□ -0.87
VCP-202ENST00000417448 C14orf132Q9NPU4 83 aa9.61□□□□□ -0.87
VCP-202ENST00000417448 USH2AO75445 5202 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms