RNA–Protein interactions for RNA: ENST00000416135.5

RAD50-202, Transcript of RAD50 double strand break repair protein, humanhuman

TSL 1 (best)

Gene RAD50, Length 923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD50-202ENST00000416135 PRLHP81277 87 aa1.89□□□□□ -2.11
RAD50-202ENST00000416135 DEFB110Q30KQ9 67 aa1.89□□□□□ -2.11
RAD50-202ENST00000416135 LELP1Q5T871 98 aa1.88□□□□□ -2.11
RAD50-202ENST00000416135 ICE1Q9Y2F5 2266 aa1.87□□□□□ -2.11
RAD50-202ENST00000416135 NOP10Q9NPE3 64 aaKnown RBP1.87□□□□□ -2.11
RAD50-202ENST00000416135 CACNA1BQ00975 2339 aa1.86□□□□□ -2.11
RAD50-202ENST00000416135 FN1P02751 2386 aaKnown RBP1.86□□□□□ -2.11
RAD50-202ENST00000416135 KRTAP12-3P60328 96 aa1.86□□□□□ -2.11
RAD50-202ENST00000416135 TPRP12270 2363 aaKnown RBP1.84□□□□□ -2.11
RAD50-202ENST00000416135 Q5VSD8 79 aa1.84□□□□□ -2.11
RAD50-202ENST00000416135 DEFB108BQ8NET1 73 aa1.84□□□□□ -2.11
RAD50-202ENST00000416135 APLNQ9ULZ1 77 aa1.84□□□□□ -2.11
RAD50-202ENST00000416135 S4R3F8 94 aa1.84□□□□□ -2.11
RAD50-202ENST00000416135 COL6A6A6NMZ7 2263 aa1.83□□□□□ -2.12
RAD50-202ENST00000416135 DEFB1P60022 68 aa1.83□□□□□ -2.12
RAD50-202ENST00000416135 PRO0255Q9UI72 69 aa1.83□□□□□ -2.12
RAD50-202ENST00000416135 HTN1P15515 57 aa1.82□□□□□ -2.12
RAD50-202ENST00000416135 WNK2Q9Y3S1 2297 aa1.82□□□□□ -2.12
RAD50-202ENST00000416135 SPINK1P00995 79 aa1.81□□□□□ -2.12
RAD50-202ENST00000416135 Q9Y3F1 56 aa1.8□□□□□ -2.12
RAD50-202ENST00000416135 FLG2Q5D862 2391 aaPredicted RBP1.8□□□□□ -2.12
RAD50-202ENST00000416135 FBN3Q75N90 2809 aa1.8□□□□□ -2.12
RAD50-202ENST00000416135 KRTAP13-4Q3LI77 160 aa1.78□□□□□ -2.12
RAD50-202ENST00000416135 GPR179Q6PRD1 2367 aa1.78□□□□□ -2.12
RAD50-202ENST00000416135 WNK1Q9H4A3 2382 aa1.78□□□□□ -2.12
RAD50-202ENST00000416135 FAM208BQ5VWN6 2430 aa1.76□□□□□ -2.13
RAD50-202ENST00000416135 PCNX1Q96RV3 2341 aa1.76□□□□□ -2.13
RAD50-202ENST00000416135 ZDBF2Q9HCK1 2354 aa1.76□□□□□ -2.13
RAD50-202ENST00000416135 CD52P31358 61 aa1.75□□□□□ -2.13
RAD50-202ENST00000416135 HMCN1Q96RW7 5635 aa1.75□□□□□ -2.13
RAD50-202ENST00000416135 IGF2RP11717 2491 aa1.75□□□□□ -2.13
RAD50-202ENST00000416135 DEFB103AP81534 67 aa1.74□□□□□ -2.13
RAD50-202ENST00000416135 PIEZO2Q9H5I5 2752 aa1.73□□□□□ -2.13
RAD50-202ENST00000416135 SPTBN1Q01082 2364 aaKnown RBP1.72□□□□□ -2.13
RAD50-202ENST00000416135 M0QZ58 72 aa1.72□□□□□ -2.13
RAD50-202ENST00000416135 KRTAP12-1P59990 96 aa1.72□□□□□ -2.13
RAD50-202ENST00000416135 A0A0D9SG42 100 aa1.71□□□□□ -2.14
RAD50-202ENST00000416135 A0A0C4DFX4 3053 aa1.7□□□□□ -2.14
RAD50-202ENST00000416135 AKAP6Q13023 2319 aa1.69□□□□□ -2.14
RAD50-202ENST00000416135 DEFB136Q30KP8 78 aa1.69□□□□□ -2.14
RAD50-202ENST00000416135 PTPRZ1P23471 2315 aaPredicted RBP1.68□□□□□ -2.14
RAD50-202ENST00000416135 PKDREJQ9NTG1 2253 aa1.68□□□□□ -2.14
RAD50-202ENST00000416135 ROS1P08922 2347 aa1.66□□□□□ -2.14
RAD50-202ENST00000416135 H3BNG1 76 aa1.65□□□□□ -2.15
RAD50-202ENST00000416135 DEFB124Q8NES8 71 aa1.65□□□□□ -2.15
RAD50-202ENST00000416135 JMJD1CQ15652 2540 aa1.65□□□□□ -2.15
RAD50-202ENST00000416135 ZNF462Q96JM2 2506 aa1.65□□□□□ -2.15
RAD50-202ENST00000416135 ACACAQ13085 2346 aa1.63□□□□□ -2.15
RAD50-202ENST00000416135 SPINK6Q6UWN8 80 aa1.63□□□□□ -2.15
RAD50-202ENST00000416135 CHD7Q9P2D1 2997 aa1.62□□□□□ -2.15
RAD50-202ENST00000416135 A0A096LNI7 61 aa1.62□□□□□ -2.15
RAD50-202ENST00000416135 CACNA1GO43497 2377 aa1.62□□□□□ -2.15
RAD50-202ENST00000416135 MGAQ8IWI9 3026 aa1.61□□□□□ -2.15
RAD50-202ENST00000416135 SPTA1P02549 2419 aa1.61□□□□□ -2.15
RAD50-202ENST00000416135 DEFB133Q30KQ1 61 aa1.61□□□□□ -2.15
RAD50-202ENST00000416135 LINC01556Q5JQF7 62 aa1.61□□□□□ -2.15
RAD50-202ENST00000416135 CSPG4Q6UVK1 2322 aa1.61□□□□□ -2.15
RAD50-202ENST00000416135 TENM2Q9NT68 2774 aa1.6□□□□□ -2.15
RAD50-202ENST00000416135 WDR87Q6ZQQ6 2873 aa1.6□□□□□ -2.15
RAD50-202ENST00000416135 A0A096LPF7 62 aa1.59□□□□□ -2.15
RAD50-202ENST00000416135 CACNA1HO95180 2353 aa1.58□□□□□ -2.16
RAD50-202ENST00000416135 KRTAP6-3Q3LI67 103 aa1.57□□□□□ -2.16
RAD50-202ENST00000416135 DSPP15924 2871 aaKnown RBP1.57□□□□□ -2.16
RAD50-202ENST00000416135 BAHCC1Q9P281 2608 aa1.56□□□□□ -2.16
RAD50-202ENST00000416135 SPART-AS1P0CW21 52 aa1.56□□□□□ -2.16
RAD50-202ENST00000416135 SPTBN4Q9H254 2564 aa1.56□□□□□ -2.16
RAD50-202ENST00000416135 MUC6Q6W4X9 2439 aa1.56□□□□□ -2.16
RAD50-202ENST00000416135 SPTBN2O15020 2390 aa1.55□□□□□ -2.16
RAD50-202ENST00000416135 REV3LO60673 3130 aa1.54□□□□□ -2.16
RAD50-202ENST00000416135 TNP1P09430 55 aa1.54□□□□□ -2.16
RAD50-202ENST00000416135 OTOGQ6ZRI0 2925 aa1.54□□□□□ -2.16
RAD50-202ENST00000416135 COL6A3P12111 3177 aa1.54□□□□□ -2.16
RAD50-202ENST00000416135 MAP1BP46821 2468 aaKnown RBP1.52□□□□□ -2.17
RAD50-202ENST00000416135 ABCA2Q9BZC7 2435 aa1.52□□□□□ -2.17
RAD50-202ENST00000416135 CEP350Q5VT06 3117 aa1.52□□□□□ -2.17
RAD50-202ENST00000416135 ASH1LQ9NR48 2969 aaKnown RBP1.51□□□□□ -2.17
RAD50-202ENST00000416135 RPS29P62273 56 aaKnown RBP1.51□□□□□ -2.17
RAD50-202ENST00000416135 F8P00451 2351 aa1.51□□□□□ -2.17
RAD50-202ENST00000416135 C2CD3Q4AC94 2353 aa1.51□□□□□ -2.17
RAD50-202ENST00000416135 C9orf92A6NGG3 77 aa1.5□□□□□ -2.17
RAD50-202ENST00000416135 UBR5O95071 2799 aaPredicted RBP1.49□□□□□ -2.17
RAD50-202ENST00000416135 APC2O95996 2303 aa1.49□□□□□ -2.17
RAD50-202ENST00000416135 PRRC2CQ9Y520 2896 aaKnown RBP1.49□□□□□ -2.17
RAD50-202ENST00000416135 CHD6Q8TD26 2715 aa1.48□□□□□ -2.17
RAD50-202ENST00000416135 TENM1Q9UKZ4 2725 aa1.48□□□□□ -2.17
RAD50-202ENST00000416135 CELSR2Q9HCU4 2923 aa1.48□□□□□ -2.17
RAD50-202ENST00000416135 TNRC18O15417 2968 aaPredicted RBP1.48□□□□□ -2.17
RAD50-202ENST00000416135 GVINP1Q7Z2Y8 2422 aa1.48□□□□□ -2.17
RAD50-202ENST00000416135 COL6A5A8TX70 2615 aa1.47□□□□□ -2.17
RAD50-202ENST00000416135 DEFB135Q30KP9 77 aa1.47□□□□□ -2.17
RAD50-202ENST00000416135 U3KQA8 63 aa1.47□□□□□ -2.17
RAD50-202ENST00000416135 TRANK1O15050 2925 aa1.47□□□□□ -2.17
RAD50-202ENST00000416135 VWFP04275 2813 aa1.46□□□□□ -2.18
RAD50-202ENST00000416135 CEP290O15078 2479 aa1.45□□□□□ -2.18
RAD50-202ENST00000416135 PKD1L2Q7Z442 2459 aa1.45□□□□□ -2.18
RAD50-202ENST00000416135 NCOR1O75376 2440 aa1.45□□□□□ -2.18
RAD50-202ENST00000416135 EP300Q09472 2414 aaPredicted RBP1.45□□□□□ -2.18
RAD50-202ENST00000416135 CCDC168Q8NDH2 2452 aa1.44□□□□□ -2.18
RAD50-202ENST00000416135 CEP250Q9BV73 2442 aa1.44□□□□□ -2.18
RAD50-202ENST00000416135 HTN3P15516 51 aa1.44□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms