RNA–Protein interactions for RNA: ENST00000415950.4

SCN1B-202, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SCN1B, Length 4,537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-202ENST00000415950 LINC01600Q96MT4 127 aa8.5□□□□□ -1.05
SCN1B-202ENST00000415950 C16orf90A8MZG2 172 aa8.5□□□□□ -1.05
SCN1B-202ENST00000415950 C8orf87E5RJ46 101 aa8.49□□□□□ -1.05
SCN1B-202ENST00000415950 NIPBLQ6KC79 2804 aaeCLIP8.49□□□□□ -1.05
SCN1B-202ENST00000415950 Q8N377 158 aa8.49□□□□□ -1.05
SCN1B-202ENST00000415950 Q8NDZ9 215 aa8.49□□□□□ -1.05
SCN1B-202ENST00000415950 H3BNG1 76 aa8.48□□□□□ -1.05
SCN1B-202ENST00000415950 A8MWP4 228 aa8.48□□□□□ -1.05
SCN1B-202ENST00000415950 IGFL1Q6UW32 110 aa8.46□□□□□ -1.05
SCN1B-202ENST00000415950 KRTAP24-1Q3LI83 254 aa8.46□□□□□ -1.05
SCN1B-202ENST00000415950 OBSCN-AS1Q96MR7 158 aa8.46□□□□□ -1.06
SCN1B-202ENST00000415950 DMBT1Q9UGM3 2413 aaPredicted RBP8.45□□□□□ -1.06
SCN1B-202ENST00000415950 KCNQ1DNQ9H478 68 aa8.45□□□□□ -1.06
SCN1B-202ENST00000415950 IGLV1-50A0A075B6I6 118 aa8.45□□□□□ -1.06
SCN1B-202ENST00000415950 KRTAP10-3P60369 221 aa8.45□□□□□ -1.06
SCN1B-202ENST00000415950 RTL8CO15255 209 aa8.44□□□□□ -1.06
SCN1B-202ENST00000415950 MXRA5Q9NR99 2828 aa8.44□□□□□ -1.06
SCN1B-202ENST00000415950 NBDYA0A0U1RRE5 68 aa8.44□□□□□ -1.06
SCN1B-202ENST00000415950 C15orf56Q8N910 161 aa8.44□□□□□ -1.06
SCN1B-202ENST00000415950 ERC2-IT1O76042 136 aa8.44□□□□□ -1.06
SCN1B-202ENST00000415950 MRPL34Q9BQ48 92 aaKnown RBP8.44□□□□□ -1.06
SCN1B-202ENST00000415950 PRR34Q9NV39 138 aa8.44□□□□□ -1.06
SCN1B-202ENST00000415950 DNAH10OSP0CZ25 163 aa8.43□□□□□ -1.06
SCN1B-202ENST00000415950 Q96NJ1 140 aa8.43□□□□□ -1.06
SCN1B-202ENST00000415950 SSBP3-AS1Q7Z2R9 100 aa8.42□□□□□ -1.06
SCN1B-202ENST00000415950 CASC10Q5T4H9 136 aa8.42□□□□□ -1.06
SCN1B-202ENST00000415950 TYMSOSQ8TAI1 123 aa8.42□□□□□ -1.06
SCN1B-202ENST00000415950 ANAPC11Q9NYG5 84 aa8.42□□□□□ -1.06
SCN1B-202ENST00000415950 LOC101927531A0A1B0GV80 90 aa8.41□□□□□ -1.06
SCN1B-202ENST00000415950 PRR15Q8IV56 129 aa8.41□□□□□ -1.06
SCN1B-202ENST00000415950 A0A1W2PNM2 257 aa8.41□□□□□ -1.06
SCN1B-202ENST00000415950 SPINT4Q6UDR6 99 aa8.41□□□□□ -1.06
SCN1B-202ENST00000415950 OXTP01178 125 aa8.4□□□□□ -1.07
SCN1B-202ENST00000415950 FAM229AH3BQW9 127 aa8.38□□□□□ -1.07
SCN1B-202ENST00000415950 DSCR10P59022 87 aa8.38□□□□□ -1.07
SCN1B-202ENST00000415950 PLA2G1BP04054 148 aaKnown RBP8.38□□□□□ -1.07
SCN1B-202ENST00000415950 UQCR11O14957 56 aa8.37□□□□□ -1.07
SCN1B-202ENST00000415950 CYP4F30PQ9H0H9 118 aa8.37□□□□□ -1.07
SCN1B-202ENST00000415950 C8orf17Q9NRJ1 99 aa8.37□□□□□ -1.07
SCN1B-202ENST00000415950 LINC00612Q8N6U2 182 aa8.36□□□□□ -1.07
SCN1B-202ENST00000415950 Q5XG85 94 aa8.34□□□□□ -1.07
SCN1B-202ENST00000415950 KMT2BQ9UMN6 2715 aaPredicted RBP8.34□□□□□ -1.07
SCN1B-202ENST00000415950 FAM229BQ4G0N7 80 aa8.32□□□□□ -1.08
SCN1B-202ENST00000415950 KRTAP1-3Q8IUG1 177 aa8.31□□□□□ -1.08
SCN1B-202ENST00000415950 MIR22HGQ0VDD5 57 aa8.31□□□□□ -1.08
SCN1B-202ENST00000415950 FP248Q71RG6 208 aaPredicted RBP8.31□□□□□ -1.08
SCN1B-202ENST00000415950 SPENQ96T58 3664 aaKnown RBP8.31□□□□□ -1.08
SCN1B-202ENST00000415950 OCR1Q9BZK8 76 aa8.3□□□□□ -1.08
SCN1B-202ENST00000415950 KRTAP10-11P60412 298 aa8.3□□□□□ -1.08
SCN1B-202ENST00000415950 A0A1B0GVX0 72 aa8.3□□□□□ -1.08
SCN1B-202ENST00000415950 PRR26Q8N8Z3 221 aa8.28□□□□□ -1.08
SCN1B-202ENST00000415950 APLNQ9ULZ1 77 aa8.27□□□□□ -1.09
SCN1B-202ENST00000415950 CD164Q04900 197 aa8.26□□□□□ -1.09
SCN1B-202ENST00000415950 C9orf92A6NGG3 77 aa8.25□□□□□ -1.09
SCN1B-202ENST00000415950 KRTAP1-1Q07627 177 aa8.25□□□□□ -1.09
SCN1B-202ENST00000415950 ZNF861PO60384 105 aa8.24□□□□□ -1.09
SCN1B-202ENST00000415950 K7EIL1 84 aa8.23□□□□□ -1.09
SCN1B-202ENST00000415950 KTN1-AS1Q86SY8 53 aa8.23□□□□□ -1.09
SCN1B-202ENST00000415950 C9orf163Q8N9P6 203 aa8.22□□□□□ -1.09
SCN1B-202ENST00000415950 IGLV5-48A0A075B6I7 105 aa8.22□□□□□ -1.09
SCN1B-202ENST00000415950 Q8N1X5 172 aa8.22□□□□□ -1.09
SCN1B-202ENST00000415950 SMR3BP02814 79 aaPredicted RBP8.2□□□□□ -1.1
SCN1B-202ENST00000415950 PSORS1C2Q9UIG4 136 aa8.19□□□□□ -1.1
SCN1B-202ENST00000415950 A0A0D9SG42 100 aa8.18□□□□□ -1.1
SCN1B-202ENST00000415950 LCA10Q71F78 164 aa8.18□□□□□ -1.1
SCN1B-202ENST00000415950 TLX1NBP0CAT3 122 aa8.17□□□□□ -1.1
SCN1B-202ENST00000415950 CRIPTQ9P021 101 aa8.17□□□□□ -1.1
SCN1B-202ENST00000415950 A0A087WTM6 91 aa8.16□□□□□ -1.1
SCN1B-202ENST00000415950 PDZD2O15018 2839 aa8.16□□□□□ -1.1
SCN1B-202ENST00000415950 WIPF1O43516 503 aa8.15□□□□□ -1.1
SCN1B-202ENST00000415950 SPRR4Q96PI1 79 aa8.14□□□□□ -1.11
SCN1B-202ENST00000415950 PLA2G2DQ9UNK4 145 aa8.14□□□□□ -1.11
SCN1B-202ENST00000415950 LINC01554Q52M75 96 aa8.13□□□□□ -1.11
SCN1B-202ENST00000415950 LINC00304Q8N9R0 145 aa8.13□□□□□ -1.11
SCN1B-202ENST00000415950 SPANXA2-OT1Q8N9U9 137 aa8.13□□□□□ -1.11
SCN1B-202ENST00000415950 CDC42SE1Q9NRR8 79 aa8.12□□□□□ -1.11
SCN1B-202ENST00000415950 IGLV7-43P04211 117 aa8.1□□□□□ -1.11
SCN1B-202ENST00000415950 TENM4Q6N022 2769 aa8.09□□□□□ -1.11
SCN1B-202ENST00000415950 FBN1P35555 2871 aaKnown RBP8.08□□□□□ -1.12
SCN1B-202ENST00000415950 WWC2-AS2Q96NR7 200 aa8.08□□□□□ -1.12
SCN1B-202ENST00000415950 Q1T7F1 81 aa8.07□□□□□ -1.12
SCN1B-202ENST00000415950 CNBPP62633 177 aaKnown RBP8.04□□□□□ -1.12
SCN1B-202ENST00000415950 COX6B2Q6YFQ2 88 aa8.04□□□□□ -1.12
SCN1B-202ENST00000415950 PRAC1Q96KF2 57 aa8.04□□□□□ -1.12
SCN1B-202ENST00000415950 IGLV5-37A0A075B6J1 123 aa8.03□□□□□ -1.12
SCN1B-202ENST00000415950 VWFP04275 2813 aa8.03□□□□□ -1.12
SCN1B-202ENST00000415950 RBM12B-AS1Q9P1G2 102 aa8.02□□□□□ -1.12
SCN1B-202ENST00000415950 TENM3Q9P273 2699 aa8.02□□□□□ -1.13
SCN1B-202ENST00000415950 Q8N9P0 234 aaPredicted RBP8.01□□□□□ -1.13
SCN1B-202ENST00000415950 HRES1P13985 223 aa8.01□□□□□ -1.13
SCN1B-202ENST00000415950 IGLV7-46A0A075B6I9 117 aa8□□□□□ -1.13
SCN1B-202ENST00000415950 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.99□□□□□ -1.13
SCN1B-202ENST00000415950 TENM1Q9UKZ4 2725 aa7.98□□□□□ -1.13
SCN1B-202ENST00000415950 PKD1L1Q8TDX9 2849 aa7.98□□□□□ -1.13
SCN1B-202ENST00000415950 KRTAP26-1Q6PEX3 210 aa7.98□□□□□ -1.13
SCN1B-202ENST00000415950 CSMD2Q7Z408 3487 aa7.96□□□□□ -1.13
SCN1B-202ENST00000415950 SPRR1AP35321 89 aa7.96□□□□□ -1.14
SCN1B-202ENST00000415950 Q5VV11 94 aa7.95□□□□□ -1.14
SCN1B-202ENST00000415950 J3QL48 77 aa7.95□□□□□ -1.14
SCN1B-202ENST00000415950 TNP2Q05952 138 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms