RNA–Protein interactions for RNA: ENST00000414057.6

SCAMP4-204, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 1 (best)

Gene SCAMP4, Length 1,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-204ENST00000414057 KRTAP11-1Q8IUC1 163 aa10.31□□□□□ -0.76
SCAMP4-204ENST00000414057 Q9BRP9 147 aa10.3□□□□□ -0.76
SCAMP4-204ENST00000414057 KRTAP10-8P60410 259 aa10.3□□□□□ -0.76
SCAMP4-204ENST00000414057 ETDBQ3ZM63 59 aa10.3□□□□□ -0.76
SCAMP4-204ENST00000414057 PPDPFLQ8WWR9 84 aa10.29□□□□□ -0.76
SCAMP4-204ENST00000414057 UBE2AP49459 152 aa10.28□□□□□ -0.76
SCAMP4-204ENST00000414057 SMCR5Q8TEV8 140 aa10.26□□□□□ -0.77
SCAMP4-204ENST00000414057 IGLV7-43P04211 117 aa10.25□□□□□ -0.77
SCAMP4-204ENST00000414057 PRLHP81277 87 aa10.25□□□□□ -0.77
SCAMP4-204ENST00000414057 KRTAP13-1Q8IUC0 172 aa10.24□□□□□ -0.77
SCAMP4-204ENST00000414057 UBR4Q5T4S7 5183 aa10.24□□□□□ -0.77
SCAMP4-204ENST00000414057 IGLV5-48A0A075B6I7 105 aa10.22□□□□□ -0.77
SCAMP4-204ENST00000414057 JMJD7-PLA2G4BH0Y9G9 81 aa10.22□□□□□ -0.77
SCAMP4-204ENST00000414057 HIGD2AQ9BW72 106 aa10.22□□□□□ -0.77
SCAMP4-204ENST00000414057 TEX49A0A1B0GTD5 131 aa10.2□□□□□ -0.78
SCAMP4-204ENST00000414057 J3QR89 54 aa10.2□□□□□ -0.78
SCAMP4-204ENST00000414057 ERC2-IT1O76042 136 aa10.2□□□□□ -0.78
SCAMP4-204ENST00000414057 OBSCN-AS1Q96MR7 158 aa10.2□□□□□ -0.78
SCAMP4-204ENST00000414057 K7ERU9 68 aa10.18□□□□□ -0.78
SCAMP4-204ENST00000414057 ZNF861PO60384 105 aa10.18□□□□□ -0.78
SCAMP4-204ENST00000414057 LINC01547P58512 204 aaPredicted RBP10.18□□□□□ -0.78
SCAMP4-204ENST00000414057 LAMTOR3Q9UHA4 124 aa10.18□□□□□ -0.78
SCAMP4-204ENST00000414057 Q8N377 158 aa10.17□□□□□ -0.78
SCAMP4-204ENST00000414057 NDUFV3P56181 108 aaKnown RBP10.16□□□□□ -0.78
SCAMP4-204ENST00000414057 ST20-AS1Q8NBB2 130 aa10.16□□□□□ -0.78
SCAMP4-204ENST00000414057 DEFB105AQ8NG35 78 aa10.16□□□□□ -0.78
SCAMP4-204ENST00000414057 ZNF706Q9Y5V0 76 aaPredicted RBP10.15□□□□□ -0.78
SCAMP4-204ENST00000414057 SPRR1BP22528 89 aa10.14□□□□□ -0.79
SCAMP4-204ENST00000414057 RBM3P98179 157 aaKnown RBP10.14□□□□□ -0.79
SCAMP4-204ENST00000414057 C21orf62-AS1Q17RA5 79 aa10.14□□□□□ -0.79
SCAMP4-204ENST00000414057 PRR26Q8N8Z3 221 aa10.13□□□□□ -0.79
SCAMP4-204ENST00000414057 PDE6GP18545 87 aa10.11□□□□□ -0.79
SCAMP4-204ENST00000414057 DSCR8Q96T75 97 aa10.1□□□□□ -0.79
SCAMP4-204ENST00000414057 C14orf132Q9NPU4 83 aa10.1□□□□□ -0.79
SCAMP4-204ENST00000414057 LRP2P98164 4655 aa10.09□□□□□ -0.79
SCAMP4-204ENST00000414057 LOC110117498A0A087WWA1 95 aa10.09□□□□□ -0.79
SCAMP4-204ENST00000414057 F8WEM9 126 aa10.09□□□□□ -0.79
SCAMP4-204ENST00000414057 SPRR4Q96PI1 79 aa10.09□□□□□ -0.79
SCAMP4-204ENST00000414057 FAM240AA0A1B0GVK7 77 aa10.07□□□□□ -0.8
SCAMP4-204ENST00000414057 KRTAP1-4P0C5Y4 121 aa10.07□□□□□ -0.8
SCAMP4-204ENST00000414057 LINC00483Q53H64 154 aa10.07□□□□□ -0.8
SCAMP4-204ENST00000414057 GAGE2AQ6NT46 116 aa10.07□□□□□ -0.8
SCAMP4-204ENST00000414057 SMIM29Q86T20 159 aa10.07□□□□□ -0.8
SCAMP4-204ENST00000414057 TRBV7-4A0A0J9YYF1 115 aa10.06□□□□□ -0.8
SCAMP4-204ENST00000414057 ACYP1P07311 99 aa10.05□□□□□ -0.8
SCAMP4-204ENST00000414057 A0A1B0GV72 72 aa10.04□□□□□ -0.8
SCAMP4-204ENST00000414057 IGLV8-61A0A075B6I0 122 aa10.04□□□□□ -0.8
SCAMP4-204ENST00000414057 CCKP06307 115 aa10.04□□□□□ -0.8
SCAMP4-204ENST00000414057 Q6ZQT0 140 aa10.04□□□□□ -0.8
SCAMP4-204ENST00000414057 C3orf22Q8N5N4 141 aa10.04□□□□□ -0.8
SCAMP4-204ENST00000414057 Q6JHZ5 121 aa9.99□□□□□ -0.81
SCAMP4-204ENST00000414057 A0A1B0GW54 56 aa9.98□□□□□ -0.81
SCAMP4-204ENST00000414057 CRYGAP11844 174 aa9.96□□□□□ -0.82
SCAMP4-204ENST00000414057 FAM229BQ4G0N7 80 aa9.94□□□□□ -0.82
SCAMP4-204ENST00000414057 PRR4Q16378 134 aa9.92□□□□□ -0.82
SCAMP4-204ENST00000414057 IGFL1Q6UW32 110 aa9.92□□□□□ -0.82
SCAMP4-204ENST00000414057 Q8NBF4 154 aa9.92□□□□□ -0.82
SCAMP4-204ENST00000414057 TYMSOSQ8TAI1 123 aa9.92□□□□□ -0.82
SCAMP4-204ENST00000414057 RNF213Q63HN8 5207 aa9.92□□□□□ -0.82
SCAMP4-204ENST00000414057 VPS25Q9BRG1 176 aa9.91□□□□□ -0.82
SCAMP4-204ENST00000414057 C9orf153Q5TBE3 101 aa9.91□□□□□ -0.82
SCAMP4-204ENST00000414057 A0A087X002 238 aa9.9□□□□□ -0.83
SCAMP4-204ENST00000414057 IGLV9-49A0A0B4J1Y8 123 aa9.9□□□□□ -0.83
SCAMP4-204ENST00000414057 Q6Q795 121 aa9.9□□□□□ -0.83
SCAMP4-204ENST00000414057 CDIP1Q9H305 208 aa9.89□□□□□ -0.83
SCAMP4-204ENST00000414057 LPAP08519 4548 aa9.89□□□□□ -0.83
SCAMP4-204ENST00000414057 A0A1W2PNM2 257 aa9.88□□□□□ -0.83
SCAMP4-204ENST00000414057 LINC00846Q9NV44 126 aa9.87□□□□□ -0.83
SCAMP4-204ENST00000414057 ANAPC11Q9NYG5 84 aa9.87□□□□□ -0.83
SCAMP4-204ENST00000414057 MOBPQ13875 183 aa9.86□□□□□ -0.83
SCAMP4-204ENST00000414057 SSBP3-AS1Q7Z2R9 100 aa9.86□□□□□ -0.83
SCAMP4-204ENST00000414057 UBL5Q9BZL1 73 aa9.86□□□□□ -0.83
SCAMP4-204ENST00000414057 LINC00643Q86TS7 51 aa9.84□□□□□ -0.83
SCAMP4-204ENST00000414057 TRBV7-7A0A0K0K1E9 115 aa9.81□□□□□ -0.84
SCAMP4-204ENST00000414057 CD164Q04900 197 aa9.8□□□□□ -0.84
SCAMP4-204ENST00000414057 KRTAP13-2Q52LG2 175 aa9.8□□□□□ -0.84
SCAMP4-204ENST00000414057 LINC00304Q8N9R0 145 aa9.8□□□□□ -0.84
SCAMP4-204ENST00000414057 A0A0G2JQZ4 141 aa9.79□□□□□ -0.84
SCAMP4-204ENST00000414057 ATP5EP2Q5VTU8 51 aa9.79□□□□□ -0.84
SCAMP4-204ENST00000414057 Q6ZVQ6 151 aa9.79□□□□□ -0.84
SCAMP4-204ENST00000414057 NREPQ16612 68 aa9.78□□□□□ -0.84
SCAMP4-204ENST00000414057 SIGMAR1Q99720 223 aa9.77□□□□□ -0.85
SCAMP4-204ENST00000414057 A0A087WSZ3 146 aa9.76□□□□□ -0.85
SCAMP4-204ENST00000414057 SS18L2Q9UHA2 77 aa9.75□□□□□ -0.85
SCAMP4-204ENST00000414057 SPAG11AQ6PDA7 123 aa9.72□□□□□ -0.85
SCAMP4-204ENST00000414057 MT-ATP8P03928 68 aa9.72□□□□□ -0.85
SCAMP4-204ENST00000414057 CXCL6P80162 114 aa9.72□□□□□ -0.85
SCAMP4-204ENST00000414057 IMUPQ9GZP8 106 aa9.71□□□□□ -0.86
SCAMP4-204ENST00000414057 A0A0U1RQV1 116 aa9.69□□□□□ -0.86
SCAMP4-204ENST00000414057 C4orf48Q5BLP8 95 aa9.69□□□□□ -0.86
SCAMP4-204ENST00000414057 RETNLBQ9BQ08 111 aa9.69□□□□□ -0.86
SCAMP4-204ENST00000414057 HRCT1Q6UXD1 115 aa9.68□□□□□ -0.86
SCAMP4-204ENST00000414057 BPY2O14599 106 aa9.66□□□□□ -0.86
SCAMP4-204ENST00000414057 Q5XG85 94 aa9.66□□□□□ -0.86
SCAMP4-204ENST00000414057 IGLV7-46A0A075B6I9 117 aa9.66□□□□□ -0.86
SCAMP4-204ENST00000414057 IGKV3D-7A0A0C4DH55 119 aa9.66□□□□□ -0.86
SCAMP4-204ENST00000414057 SPINK1P00995 79 aa9.65□□□□□ -0.87
SCAMP4-204ENST00000414057 TPRXLQ17RH7 258 aa9.65□□□□□ -0.87
SCAMP4-204ENST00000414057 LIMD2Q9BT23 127 aa9.65□□□□□ -0.87
SCAMP4-204ENST00000414057 RPS29P62273 56 aaKnown RBP9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms