RNA–Protein interactions for RNA: ENST00000413725.5

SF1-206, Transcript of splicing factor 1, human

TSL 2

Gene SF1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SF1-206	ENST00000413725	LAMTOR3	Q9UHA4	124 aa		7.75	□□□□□ -1.17
SF1-206	ENST00000413725	IGLV9-49	A0A0B4J1Y8	123 aa		7.74	□□□□□ -1.17
SF1-206	ENST00000413725	SCGB1C2	P0DMR2	95 aa		7.74	□□□□□ -1.17
SF1-206	ENST00000413725	FAM218A	Q96MZ4	157 aa		7.74	□□□□□ -1.17
SF1-206	ENST00000413725	LINC01547	P58512	204 aa	Predicted RBP	7.73	□□□□□ -1.17
SF1-206	ENST00000413725	MOBP	Q13875	183 aa		7.73	□□□□□ -1.17
SF1-206	ENST00000413725	C9orf153	Q5TBE3	101 aa		7.73	□□□□□ -1.17
SF1-206	ENST00000413725	CLEC2B	Q92478	149 aa		7.73	□□□□□ -1.17
SF1-206	ENST00000413725	DNAL4	O96015	105 aa		7.72	□□□□□ -1.17
SF1-206	ENST00000413725	OCIAD2	Q56VL3	154 aa		7.72	□□□□□ -1.17
SF1-206	ENST00000413725		Q8N377	158 aa		7.72	□□□□□ -1.17
SF1-206	ENST00000413725		Q8NBF4	154 aa		7.71	□□□□□ -1.18
SF1-206	ENST00000413725	PPDPFL	Q8WWR9	84 aa		7.71	□□□□□ -1.18
SF1-206	ENST00000413725	PCP4L1	A6NKN8	68 aa		7.7	□□□□□ -1.18
SF1-206	ENST00000413725	LYRM7	Q5U5X0	104 aa		7.7	□□□□□ -1.18
SF1-206	ENST00000413725	SSBP3-AS1	Q7Z2R9	100 aa		7.7	□□□□□ -1.18
SF1-206	ENST00000413725	LINC00304	Q8N9R0	145 aa		7.7	□□□□□ -1.18
SF1-206	ENST00000413725		F8WEM9	126 aa		7.69	□□□□□ -1.18
SF1-206	ENST00000413725	NAA38	Q9BRA0	125 aa	Known RBP	7.69	□□□□□ -1.18
SF1-206	ENST00000413725	SNHG12	Q9BXW3	62 aa		7.69	□□□□□ -1.18
SF1-206	ENST00000413725	SMIM29	Q86T20	159 aa		7.68	□□□□□ -1.18
SF1-206	ENST00000413725	LST1	O00453	97 aa		7.67	□□□□□ -1.18
SF1-206	ENST00000413725	TRAC	P01848	142 aa		7.67	□□□□□ -1.18
SF1-206	ENST00000413725	SPAG11A	Q6PDA7	123 aa		7.67	□□□□□ -1.18
SF1-206	ENST00000413725	C9orf118	A6NHY6	69 aa		7.66	□□□□□ -1.18
SF1-206	ENST00000413725		H3BQ85	93 aa		7.66	□□□□□ -1.18
SF1-206	ENST00000413725		H3BUT2	72 aa		7.66	□□□□□ -1.18
SF1-206	ENST00000413725	ORMDL1	Q9P0S3	153 aa		7.66	□□□□□ -1.18
SF1-206	ENST00000413725	TAX1BP3	O14907	124 aa		7.65	□□□□□ -1.18
SF1-206	ENST00000413725	ATXN8	Q156A1	80 aa		7.65	□□□□□ -1.18
SF1-206	ENST00000413725	HERC1	Q15751	4861 aa		7.65	□□□□□ -1.18
SF1-206	ENST00000413725	COL5A1-AS1	Q5SY13	56 aa		7.65	□□□□□ -1.18
SF1-206	ENST00000413725	TCL1B	O95988	128 aa		7.63	□□□□□ -1.19
SF1-206	ENST00000413725	FABP2	P12104	132 aa		7.63	□□□□□ -1.19
SF1-206	ENST00000413725	TRBV20-1	A0A075B6N2	111 aa		7.62	□□□□□ -1.19
SF1-206	ENST00000413725	TMEM256-PLSCR3	K7ERE1	68 aa		7.62	□□□□□ -1.19
SF1-206	ENST00000413725	SPINK1	P00995	79 aa		7.62	□□□□□ -1.19
SF1-206	ENST00000413725		A0A1W2PPM0	123 aa		7.61	□□□□□ -1.19
SF1-206	ENST00000413725	NDUFV3	P56181	108 aa	Known RBP	7.61	□□□□□ -1.19
SF1-206	ENST00000413725	IGLV8-61	A0A075B6I0	122 aa		7.6	□□□□□ -1.19
SF1-206	ENST00000413725		Q6JHZ5	121 aa		7.6	□□□□□ -1.19
SF1-206	ENST00000413725	RPS29	P62273	56 aa	Known RBP	7.58	□□□□□ -1.2
SF1-206	ENST00000413725	CD164	Q04900	197 aa		7.58	□□□□□ -1.2
SF1-206	ENST00000413725		H3BMG7	143 aa		7.57	□□□□□ -1.2
SF1-206	ENST00000413725	UBE2V1	Q13404	147 aa		7.57	□□□□□ -1.2
SF1-206	ENST00000413725	HRCT1	Q6UXD1	115 aa		7.57	□□□□□ -1.2
SF1-206	ENST00000413725	BAALC-AS2	P0C853	105 aa		7.56	□□□□□ -1.2
SF1-206	ENST00000413725	IGFL1	Q6UW32	110 aa		7.55	□□□□□ -1.2
SF1-206	ENST00000413725	LIMD2	Q9BT23	127 aa		7.55	□□□□□ -1.2
SF1-206	ENST00000413725		A0A0G2JQZ4	141 aa		7.54	□□□□□ -1.2
SF1-206	ENST00000413725		C9JAW5	83 aa		7.54	□□□□□ -1.2
SF1-206	ENST00000413725	SPCS1	Q9Y6A9	102 aa		7.54	□□□□□ -1.2
SF1-206	ENST00000413725	ANKRD29	Q8N6D5	301 aa		7.53	□□□□□ -1.2
SF1-206	ENST00000413725		A0A1B0GV72	72 aa		7.51	□□□□□ -1.21
SF1-206	ENST00000413725	PRR4	Q16378	134 aa		7.51	□□□□□ -1.21
SF1-206	ENST00000413725	RETNLB	Q9BQ08	111 aa		7.51	□□□□□ -1.21
SF1-206	ENST00000413725	RBM3	P98179	157 aa	Known RBP	7.49	□□□□□ -1.21
SF1-206	ENST00000413725	TRBV7-7	A0A0K0K1E9	115 aa		7.48	□□□□□ -1.21
SF1-206	ENST00000413725		H3BT86	120 aa		7.48	□□□□□ -1.21
SF1-206	ENST00000413725		Q5XG85	94 aa		7.48	□□□□□ -1.21
SF1-206	ENST00000413725	TEN1	Q86WV5	123 aa		7.48	□□□□□ -1.21
SF1-206	ENST00000413725	DSCR8	Q96T75	97 aa		7.48	□□□□□ -1.21
SF1-206	ENST00000413725	JMJD7-PLA2G4B	H0Y9G9	81 aa		7.47	□□□□□ -1.21
SF1-206	ENST00000413725		K7EP34	96 aa		7.47	□□□□□ -1.21
SF1-206	ENST00000413725		Q6Q795	121 aa		7.47	□□□□□ -1.21
SF1-206	ENST00000413725	FP248	Q71RG6	208 aa	Predicted RBP	7.47	□□□□□ -1.21
SF1-206	ENST00000413725	HMCN2	Q8NDA2	5059 aa		7.46	□□□□□ -1.21
SF1-206	ENST00000413725	XP32	Q5T750	250 aa		7.46	□□□□□ -1.22
SF1-206	ENST00000413725	GTF2H5	Q6ZYL4	71 aa		7.46	□□□□□ -1.22
SF1-206	ENST00000413725	MTURN	Q8N3F0	131 aa		7.46	□□□□□ -1.22
SF1-206	ENST00000413725	TRBV7-4	A0A0J9YYF1	115 aa		7.45	□□□□□ -1.22
SF1-206	ENST00000413725	CCK	P06307	115 aa		7.44	□□□□□ -1.22
SF1-206	ENST00000413725	SS18L2	Q9UHA2	77 aa		7.44	□□□□□ -1.22
SF1-206	ENST00000413725	IGLV7-46	A0A075B6I9	117 aa		7.43	□□□□□ -1.22
SF1-206	ENST00000413725		A0A1W2PNM2	257 aa		7.43	□□□□□ -1.22
SF1-206	ENST00000413725	KRTAP4-8	Q9BYQ9	185 aa		7.43	□□□□□ -1.22
SF1-206	ENST00000413725	ASB16-AS1	Q495Z4	193 aa		7.42	□□□□□ -1.22
SF1-206	ENST00000413725		A0A087WSZ3	146 aa		7.41	□□□□□ -1.22
SF1-206	ENST00000413725	PDE6G	P18545	87 aa		7.41	□□□□□ -1.22
SF1-206	ENST00000413725	VPS25	Q9BRG1	176 aa		7.41	□□□□□ -1.22
SF1-206	ENST00000413725	LOC110117498	A0A087WWA1	95 aa		7.4	□□□□□ -1.22
SF1-206	ENST00000413725	OBSCN-AS1	Q96MR7	158 aa		7.4	□□□□□ -1.22
SF1-206	ENST00000413725	C21orf62-AS1	Q17RA5	79 aa		7.39	□□□□□ -1.23
SF1-206	ENST00000413725	C1orf195	Q5TG92	126 aa		7.39	□□□□□ -1.23
SF1-206	ENST00000413725	C14orf132	Q9NPU4	83 aa		7.39	□□□□□ -1.23
SF1-206	ENST00000413725		Q6ZQT0	140 aa		7.38	□□□□□ -1.23
SF1-206	ENST00000413725	TPRXL	Q17RH7	258 aa		7.37	□□□□□ -1.23
SF1-206	ENST00000413725	PRO0461	Q9UI25	63 aa		7.37	□□□□□ -1.23
SF1-206	ENST00000413725		F8W1H4	67 aa		7.35	□□□□□ -1.23
SF1-206	ENST00000413725	LRP2	P98164	4655 aa		7.35	□□□□□ -1.23
SF1-206	ENST00000413725		A0A1B0GW54	56 aa		7.34	□□□□□ -1.23
SF1-206	ENST00000413725	LPA	P08519	4548 aa		7.33	□□□□□ -1.24
SF1-206	ENST00000413725	KRTAP13-3	Q3SY46	172 aa		7.32	□□□□□ -1.24
SF1-206	ENST00000413725	CDIP1	Q9H305	208 aa		7.32	□□□□□ -1.24
SF1-206	ENST00000413725		Q96NJ1	140 aa		7.29	□□□□□ -1.24
SF1-206	ENST00000413725		A0A1B0GV90	55 aa		7.28	□□□□□ -1.24
SF1-206	ENST00000413725	KRTAP9-1	A8MXZ3	250 aa	Predicted RBP	7.28	□□□□□ -1.24
SF1-206	ENST00000413725	SIGMAR1	Q99720	223 aa		7.28	□□□□□ -1.24
SF1-206	ENST00000413725	IGKV4-1	P06312	121 aa		7.27	□□□□□ -1.25
SF1-206	ENST00000413725	KRTAP9-2	Q9BYQ4	174 aa		7.27	□□□□□ -1.25

Retrieved 100 of 20,778 RNA–protein pairs in 103.7 ms