RNA–Protein interactions for RNA: ENST00000412061.3

BRCA1-204, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,312 nt, Biotype non stop decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-204ENST00000412061 LINC00158P58513 81 aa1.27□□□□□ -2.21
BRCA1-204ENST00000412061 Q8IZM0 81 aa1.27□□□□□ -2.21
BRCA1-204ENST00000412061 CACNA1HO95180 2353 aa1.27□□□□□ -2.21
BRCA1-204ENST00000412061 ETDCA0A1B0GVM5 59 aa1.26□□□□□ -2.21
BRCA1-204ENST00000412061 DEFB123Q8N688 67 aa1.26□□□□□ -2.21
BRCA1-204ENST00000412061 DEFB104AQ8WTQ1 72 aa1.26□□□□□ -2.21
BRCA1-204ENST00000412061 RHPN1-AS1Q9BWJ2 59 aa1.26□□□□□ -2.21
BRCA1-204ENST00000412061 CEP350Q5VT06 3117 aa1.25□□□□□ -2.21
BRCA1-204ENST00000412061 KCNQ1DNQ9H478 68 aa1.25□□□□□ -2.21
BRCA1-204ENST00000412061 IGLV5-48A0A075B6I7 105 aa1.24□□□□□ -2.21
BRCA1-204ENST00000412061 K7EQZ3 153 aa1.24□□□□□ -2.21
BRCA1-204ENST00000412061 TNRC18O15417 2968 aaPredicted RBP1.24□□□□□ -2.21
BRCA1-204ENST00000412061 PRB3Q04118 309 aaPredicted RBP1.24□□□□□ -2.21
BRCA1-204ENST00000412061 UTRNP46939 3433 aa1.24□□□□□ -2.21
BRCA1-204ENST00000412061 COL6A3P12111 3177 aa1.23□□□□□ -2.21
BRCA1-204ENST00000412061 DEFB1P60022 68 aa1.23□□□□□ -2.21
BRCA1-204ENST00000412061 CRIPTQ9P021 101 aa1.23□□□□□ -2.21
BRCA1-204ENST00000412061 USP34Q70CQ2 3546 aa1.23□□□□□ -2.21
BRCA1-204ENST00000412061 PDE4DIPQ5VU43 2346 aa1.22□□□□□ -2.21
BRCA1-204ENST00000412061 TOMM7Q9P0U1 55 aa1.22□□□□□ -2.21
BRCA1-204ENST00000412061 EP400Q96L91 3159 aa1.22□□□□□ -2.21
BRCA1-204ENST00000412061 DNAH14Q0VDD8 3507 aa1.22□□□□□ -2.21
BRCA1-204ENST00000412061 RANBP2P49792 3224 aaKnown RBP1.22□□□□□ -2.21
BRCA1-204ENST00000412061 SZT2Q5T011 3432 aa1.21□□□□□ -2.22
BRCA1-204ENST00000412061 UNC80Q8N2C7 3258 aa1.21□□□□□ -2.22
BRCA1-204ENST00000412061 KNL1Q8NG31 2342 aa1.21□□□□□ -2.22
BRCA1-204ENST00000412061 NBEAQ8NFP9 2946 aa1.21□□□□□ -2.22
BRCA1-204ENST00000412061 FRYQ5TBA9 3013 aa1.2□□□□□ -2.22
BRCA1-204ENST00000412061 LYNX1G3V0Z9 82 aa1.2□□□□□ -2.22
BRCA1-204ENST00000412061 HTN1P15515 57 aa1.2□□□□□ -2.22
BRCA1-204ENST00000412061 C2CD3Q4AC94 2353 aa1.2□□□□□ -2.22
BRCA1-204ENST00000412061 CACNA1EQ15878 2313 aa1.2□□□□□ -2.22
BRCA1-204ENST00000412061 ZZEF1O43149 2961 aa1.2□□□□□ -2.22
BRCA1-204ENST00000412061 TTC28Q96AY4 2481 aa1.19□□□□□ -2.22
BRCA1-204ENST00000412061 FCGBPQ9Y6R7 5405 aaPredicted RBP1.19□□□□□ -2.22
BRCA1-204ENST00000412061 DEFB131BA0A096LNP1 70 aa1.19□□□□□ -2.22
BRCA1-204ENST00000412061 DEFB131AP59861 70 aa1.19□□□□□ -2.22
BRCA1-204ENST00000412061 WDR87Q6ZQQ6 2873 aa1.19□□□□□ -2.22
BRCA1-204ENST00000412061 XIRP2A4UGR9 3374 aa1.19□□□□□ -2.22
BRCA1-204ENST00000412061 WNK2Q9Y3S1 2297 aa1.19□□□□□ -2.22
BRCA1-204ENST00000412061 CHD9Q3L8U1 2897 aa1.18□□□□□ -2.22
BRCA1-204ENST00000412061 FRYLO94915 3013 aa1.18□□□□□ -2.22
BRCA1-204ENST00000412061 HTTP42858 3142 aa1.18□□□□□ -2.22
BRCA1-204ENST00000412061 CHD7Q9P2D1 2997 aa1.18□□□□□ -2.22
BRCA1-204ENST00000412061 H3BUX3 64 aa1.17□□□□□ -2.22
BRCA1-204ENST00000412061 SPRR1AP35321 89 aa1.17□□□□□ -2.22
BRCA1-204ENST00000412061 DEFB109BQ30KR1 87 aa1.17□□□□□ -2.22
BRCA1-204ENST00000412061 NOP10Q9NPE3 64 aaKnown RBP1.17□□□□□ -2.22
BRCA1-204ENST00000412061 KALRNO60229 2985 aa1.17□□□□□ -2.22
BRCA1-204ENST00000412061 TRIOO75962 3097 aa1.17□□□□□ -2.22
BRCA1-204ENST00000412061 MEGF8Q7Z7M0 2845 aa1.17□□□□□ -2.22
BRCA1-204ENST00000412061 SPTBN2O15020 2390 aa1.17□□□□□ -2.22
BRCA1-204ENST00000412061 TRANK1O15050 2925 aa1.17□□□□□ -2.22
BRCA1-204ENST00000412061 CFAP54Q96N23 3096 aa1.17□□□□□ -2.22
BRCA1-204ENST00000412061 CLPSL2Q6UWE3 100 aa1.16□□□□□ -2.22
BRCA1-204ENST00000412061 WDFY4Q6ZS81 3184 aa1.16□□□□□ -2.22
BRCA1-204ENST00000412061 MKI67P46013 3256 aaKnown RBP1.16□□□□□ -2.22
BRCA1-204ENST00000412061 VCANP13611 3396 aa1.16□□□□□ -2.22
BRCA1-204ENST00000412061 MGAQ8IWI9 3026 aa1.16□□□□□ -2.22
BRCA1-204ENST00000412061 VPS13AQ96RL7 3174 aa1.16□□□□□ -2.22
BRCA1-204ENST00000412061 C5orf42Q9H799 3197 aa1.16□□□□□ -2.22
BRCA1-204ENST00000412061 MRPL34Q9BQ48 92 aaKnown RBP1.15□□□□□ -2.22
BRCA1-204ENST00000412061 C6orf48Q9UBA6 75 aa1.15□□□□□ -2.22
BRCA1-204ENST00000412061 SPTBN5Q9NRC6 3674 aaKnown RBP1.15□□□□□ -2.23
BRCA1-204ENST00000412061 PTPRZ1P23471 2315 aaPredicted RBP1.15□□□□□ -2.23
BRCA1-204ENST00000412061 PTPRQQ9UMZ3 2332 aa1.15□□□□□ -2.23
BRCA1-204ENST00000412061 LAMA2P24043 3122 aaKnown RBP1.15□□□□□ -2.23
BRCA1-204ENST00000412061 FAM186AA6NE01 2351 aa1.15□□□□□ -2.23
BRCA1-204ENST00000412061 FBN3Q75N90 2809 aa1.15□□□□□ -2.23
BRCA1-204ENST00000412061 BRCA2P51587 3418 aa1.15□□□□□ -2.23
BRCA1-204ENST00000412061 SPRR1BP22528 89 aa1.15□□□□□ -2.23
BRCA1-204ENST00000412061 LELP1Q5T871 98 aa1.15□□□□□ -2.23
BRCA1-204ENST00000412061 WFDC10BQ8IUB3 73 aa1.15□□□□□ -2.23
BRCA1-204ENST00000412061 WFDC13Q8IUB5 93 aa1.15□□□□□ -2.23
BRCA1-204ENST00000412061 DEFB105AQ8NG35 78 aa1.15□□□□□ -2.23
BRCA1-204ENST00000412061 WDFY3Q8IZQ1 3526 aa1.14□□□□□ -2.23
BRCA1-204ENST00000412061 LAMA1P25391 3075 aa1.14□□□□□ -2.23
BRCA1-204ENST00000412061 CFAP47Q6ZTR5 3102 aa1.14□□□□□ -2.23
BRCA1-204ENST00000412061 MMP24-AS1A0A0U1RRL7 71 aa1.14□□□□□ -2.23
BRCA1-204ENST00000412061 Q5VSD8 79 aa1.14□□□□□ -2.23
BRCA1-204ENST00000412061 PRO3102Q9H379 93 aa1.14□□□□□ -2.23
BRCA1-204ENST00000412061 PRUNE2Q8WUY3 3088 aa1.13□□□□□ -2.23
BRCA1-204ENST00000412061 F8P00451 2351 aa1.13□□□□□ -2.23
BRCA1-204ENST00000412061 H3BNG1 76 aa1.13□□□□□ -2.23
BRCA1-204ENST00000412061 LAMA3Q16787 3333 aa1.12□□□□□ -2.23
BRCA1-204ENST00000412061 TENM1Q9UKZ4 2725 aa1.12□□□□□ -2.23
BRCA1-204ENST00000412061 FREM2Q5SZK8 3169 aa1.12□□□□□ -2.23
BRCA1-204ENST00000412061 POLQO75417 2590 aa1.12□□□□□ -2.23
BRCA1-204ENST00000412061 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.12□□□□□ -2.23
BRCA1-204ENST00000412061 PIEZO2Q9H5I5 2752 aa1.12□□□□□ -2.23
BRCA1-204ENST00000412061 DSPP15924 2871 aaKnown RBP1.12□□□□□ -2.23
BRCA1-204ENST00000412061 DEFB130BP0DP73 79 aa1.12□□□□□ -2.23
BRCA1-204ENST00000412061 DEFB130AP0DP74 79 aa1.12□□□□□ -2.23
BRCA1-204ENST00000412061 DMXL2Q8TDJ6 3036 aa1.12□□□□□ -2.23
BRCA1-204ENST00000412061 REV3LO60673 3130 aa1.11□□□□□ -2.23
BRCA1-204ENST00000412061 DCHS1Q96JQ0 3298 aa1.11□□□□□ -2.23
BRCA1-204ENST00000412061 CDH23Q9H251 3354 aa1.11□□□□□ -2.23
BRCA1-204ENST00000412061 DMDP11532 3685 aa1.11□□□□□ -2.23
BRCA1-204ENST00000412061 SPTBN1Q01082 2364 aaKnown RBP1.11□□□□□ -2.23
BRCA1-204ENST00000412061 SPEGQ15772 3267 aa1.11□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 101.9 ms