RNA–Protein interactions for RNA: ENST00000411840.6

MRPL48-204, Transcript of mitochondrial ribosomal protein L48, humanhuman

TSL 1 (best) BASIC

Gene MRPL48, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL48-204ENST00000411840 A6NDN8 102 aa4.78□□□□□ -1.64
MRPL48-204ENST00000411840 TCL1BO95988 128 aa4.78□□□□□ -1.64
MRPL48-204ENST00000411840 KRTAP4-9Q9BYQ8 210 aa4.78□□□□□ -1.64
MRPL48-204ENST00000411840 LINC01545Q5VT33 79 aa4.77□□□□□ -1.65
MRPL48-204ENST00000411840 USH2AO75445 5202 aa4.76□□□□□ -1.65
MRPL48-204ENST00000411840 Q6Q795 121 aa4.76□□□□□ -1.65
MRPL48-204ENST00000411840 PET117Q6UWS5 81 aa4.76□□□□□ -1.65
MRPL48-204ENST00000411840 A4D1N5 150 aa4.75□□□□□ -1.65
MRPL48-204ENST00000411840 SCGB1D4Q6XE38 83 aa4.75□□□□□ -1.65
MRPL48-204ENST00000411840 COPS9Q8WXC6 57 aa4.75□□□□□ -1.65
MRPL48-204ENST00000411840 IFITM1P13164 125 aa4.74□□□□□ -1.65
MRPL48-204ENST00000411840 ATP11AUNQ6ZP68 121 aa4.74□□□□□ -1.65
MRPL48-204ENST00000411840 MUSTN1Q8IVN3 82 aa4.74□□□□□ -1.65
MRPL48-204ENST00000411840 NHP2Q9NX24 153 aaKnown RBP4.74□□□□□ -1.65
MRPL48-204ENST00000411840 SSPOA2VEC9 5147 aa4.74□□□□□ -1.65
MRPL48-204ENST00000411840 HIST1H2BKO60814 126 aa4.73□□□□□ -1.65
MRPL48-204ENST00000411840 HIST1H2BJP06899 126 aa4.73□□□□□ -1.65
MRPL48-204ENST00000411840 C3orf79P0CE67 100 aa4.73□□□□□ -1.65
MRPL48-204ENST00000411840 HIST1H2BOP23527 126 aa4.73□□□□□ -1.65
MRPL48-204ENST00000411840 HIST1H2BBP33778 126 aa4.73□□□□□ -1.65
MRPL48-204ENST00000411840 HIST1H2BDP58876 126 aa4.73□□□□□ -1.65
MRPL48-204ENST00000411840 HIST1H2BCP62807 126 aa4.73□□□□□ -1.65
MRPL48-204ENST00000411840 HIST2H2BEQ16778 126 aa4.73□□□□□ -1.65
MRPL48-204ENST00000411840 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.73□□□□□ -1.65
MRPL48-204ENST00000411840 PCP2Q8IVA1 136 aa4.73□□□□□ -1.65
MRPL48-204ENST00000411840 SMIM11BQ8TCY0 68 aa4.73□□□□□ -1.65
MRPL48-204ENST00000411840 HIST1H2BHQ93079 126 aa4.73□□□□□ -1.65
MRPL48-204ENST00000411840 HIST1H2BNQ99877 126 aa4.73□□□□□ -1.65
MRPL48-204ENST00000411840 HIST1H2BMQ99879 126 aa4.73□□□□□ -1.65
MRPL48-204ENST00000411840 F8WEM9 126 aa4.72□□□□□ -1.65
MRPL48-204ENST00000411840 Q6ZVH6 145 aa4.72□□□□□ -1.65
MRPL48-204ENST00000411840 OBSCN-AS1Q96MR7 158 aa4.72□□□□□ -1.65
MRPL48-204ENST00000411840 TRAV13-2A0A0B4J235 113 aa4.71□□□□□ -1.66
MRPL48-204ENST00000411840 KRTAP15-1Q3LI76 137 aa4.71□□□□□ -1.66
MRPL48-204ENST00000411840 KRTDAPP60985 99 aa4.7□□□□□ -1.66
MRPL48-204ENST00000411840 VAMP3Q15836 100 aa4.7□□□□□ -1.66
MRPL48-204ENST00000411840 Q6JHZ5 121 aa4.7□□□□□ -1.66
MRPL48-204ENST00000411840 Q75L30 129 aa4.7□□□□□ -1.66
MRPL48-204ENST00000411840 SLC7A5P1Q8MH63 180 aa4.7□□□□□ -1.66
MRPL48-204ENST00000411840 A0A0A0MQY5 61 aa4.69□□□□□ -1.66
MRPL48-204ENST00000411840 TRBV7-7A0A0K0K1E9 115 aa4.69□□□□□ -1.66
MRPL48-204ENST00000411840 OCIAD2Q56VL3 154 aa4.69□□□□□ -1.66
MRPL48-204ENST00000411840 IGFL1Q6UW32 110 aa4.69□□□□□ -1.66
MRPL48-204ENST00000411840 LINC00575Q6W349 94 aa4.69□□□□□ -1.66
MRPL48-204ENST00000411840 CLEC2BQ92478 149 aa4.69□□□□□ -1.66
MRPL48-204ENST00000411840 KRTAP9-8Q9BYQ0 159 aa4.69□□□□□ -1.66
MRPL48-204ENST00000411840 KRTAP4-2Q9BYR5 136 aa4.69□□□□□ -1.66
MRPL48-204ENST00000411840 hADV29S1A0JD25 119 aa4.68□□□□□ -1.66
MRPL48-204ENST00000411840 CFC1P0CG37 223 aa4.68□□□□□ -1.66
MRPL48-204ENST00000411840 Q6ZQY7 126 aa4.68□□□□□ -1.66
MRPL48-204ENST00000411840 C20orf202A1L168 122 aa4.67□□□□□ -1.66
MRPL48-204ENST00000411840 ATOH7Q8N100 152 aa4.67□□□□□ -1.66
MRPL48-204ENST00000411840 Q96NJ1 140 aa4.67□□□□□ -1.66
MRPL48-204ENST00000411840 LST1O00453 97 aa4.65□□□□□ -1.67
MRPL48-204ENST00000411840 COA6Q5JTJ3 125 aaKnown RBP4.65□□□□□ -1.67
MRPL48-204ENST00000411840 LCE5AQ5TCM9 118 aa4.64□□□□□ -1.67
MRPL48-204ENST00000411840 FCGBPQ9Y6R7 5405 aaPredicted RBP4.63□□□□□ -1.67
MRPL48-204ENST00000411840 TRBV20-1A0A075B6N2 111 aa4.63□□□□□ -1.67
MRPL48-204ENST00000411840 C20orf166-AS1Q96NR2 134 aa4.63□□□□□ -1.67
MRPL48-204ENST00000411840 SNHG12Q9BXW3 62 aa4.63□□□□□ -1.67
MRPL48-204ENST00000411840 A8MUU9 505 aa4.62□□□□□ -1.67
MRPL48-204ENST00000411840 H3BUT2 72 aa4.62□□□□□ -1.67
MRPL48-204ENST00000411840 SNRPEP62304 92 aaKnown RBP4.62□□□□□ -1.67
MRPL48-204ENST00000411840 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.62□□□□□ -1.67
MRPL48-204ENST00000411840 PPDPFLQ8WWR9 84 aa4.62□□□□□ -1.67
MRPL48-204ENST00000411840 MACF1Q9UPN3 7388 aaKnown RBP4.61□□□□□ -1.67
MRPL48-204ENST00000411840 SCGB1D1O95968 90 aa4.6□□□□□ -1.67
MRPL48-204ENST00000411840 MT2AP02795 61 aa4.6□□□□□ -1.67
MRPL48-204ENST00000411840 KRTAP4-11Q9BYQ6 195 aa4.6□□□□□ -1.67
MRPL48-204ENST00000411840 SYNE2Q8WXH0 6885 aaKnown RBP4.59□□□□□ -1.67
MRPL48-204ENST00000411840 BVES-AS1Q5T3Y7 98 aa4.59□□□□□ -1.67
MRPL48-204ENST00000411840 SS18L2Q9UHA2 77 aa4.59□□□□□ -1.67
MRPL48-204ENST00000411840 TEN1Q86WV5 123 aa4.57□□□□□ -1.68
MRPL48-204ENST00000411840 C12orf57Q99622 126 aa4.57□□□□□ -1.68
MRPL48-204ENST00000411840 KRTAP16-1A8MUX0 517 aa4.56□□□□□ -1.68
MRPL48-204ENST00000411840 DSCR10P59022 87 aa4.56□□□□□ -1.68
MRPL48-204ENST00000411840 A0A087WSZ3 146 aa4.55□□□□□ -1.68
MRPL48-204ENST00000411840 FAM236DA0A1B0GTK5 79 aa4.55□□□□□ -1.68
MRPL48-204ENST00000411840 HSBP1L1C9JCN9 74 aa4.55□□□□□ -1.68
MRPL48-204ENST00000411840 MT1FP04733 61 aa4.55□□□□□ -1.68
MRPL48-204ENST00000411840 FAM236CP0DP71 79 aa4.55□□□□□ -1.68
MRPL48-204ENST00000411840 NDUFV3P56181 108 aaKnown RBP4.55□□□□□ -1.68
MRPL48-204ENST00000411840 KRTAP5-3Q6L8H2 238 aa4.55□□□□□ -1.68
MRPL48-204ENST00000411840 HIST1H4GQ99525 98 aa4.55□□□□□ -1.68
MRPL48-204ENST00000411840 SNCGO76070 127 aa4.54□□□□□ -1.68
MRPL48-204ENST00000411840 KRTAP10-10P60014 251 aa4.54□□□□□ -1.68
MRPL48-204ENST00000411840 H0YGX0 51 aa4.52□□□□□ -1.69
MRPL48-204ENST00000411840 H3BMG7 143 aa4.52□□□□□ -1.69
MRPL48-204ENST00000411840 LINC00313P59037 77 aa4.52□□□□□ -1.69
MRPL48-204ENST00000411840 MPLKIPQ8TAP9 179 aa4.52□□□□□ -1.69
MRPL48-204ENST00000411840 HIST1H2BLQ99880 126 aa4.52□□□□□ -1.69
MRPL48-204ENST00000411840 RBM12B-AS1Q9P1G2 102 aa4.52□□□□□ -1.69
MRPL48-204ENST00000411840 HRES1P13985 223 aa4.51□□□□□ -1.69
MRPL48-204ENST00000411840 HIST3H2BBQ8N257 126 aa4.51□□□□□ -1.69
MRPL48-204ENST00000411840 FAM218AQ96MZ4 157 aa4.51□□□□□ -1.69
MRPL48-204ENST00000411840 SIGMAR1Q99720 223 aa4.51□□□□□ -1.69
MRPL48-204ENST00000411840 A0A1W2PNM2 257 aa4.5□□□□□ -1.69
MRPL48-204ENST00000411840 FABP2P12104 132 aa4.5□□□□□ -1.69
MRPL48-204ENST00000411840 S100A2P29034 98 aa4.5□□□□□ -1.69
MRPL48-204ENST00000411840 IGKV4-1P06312 121 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms