RNA–Protein interactions for RNA: ENST00000411464.3

MRPL55-220, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 767 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-220ENST00000411464 COX6B2Q6YFQ2 88 aa8.97□□□□□ -0.97
MRPL55-220ENST00000411464 LINC00518Q8N0U6 118 aa8.96□□□□□ -0.98
MRPL55-220ENST00000411464 HIST1H4GQ99525 98 aa8.96□□□□□ -0.98
MRPL55-220ENST00000411464 H7C2G1 150 aa8.95□□□□□ -0.98
MRPL55-220ENST00000411464 Q1RN00 199 aa8.95□□□□□ -0.98
MRPL55-220ENST00000411464 DEFB105AQ8NG35 78 aa8.95□□□□□ -0.98
MRPL55-220ENST00000411464 COPS9Q8WXC6 57 aa8.95□□□□□ -0.98
MRPL55-220ENST00000411464 COX7BP24311 80 aa8.93□□□□□ -0.98
MRPL55-220ENST00000411464 TEX49A0A1B0GTD5 131 aa8.92□□□□□ -0.98
MRPL55-220ENST00000411464 ELOF1P60002 83 aaKnown RBP8.92□□□□□ -0.98
MRPL55-220ENST00000411464 Q5XG85 94 aa8.92□□□□□ -0.98
MRPL55-220ENST00000411464 RPL37P61927 97 aaKnown RBP8.91□□□□□ -0.98
MRPL55-220ENST00000411464 C6orf99Q4VX62 202 aa8.91□□□□□ -0.98
MRPL55-220ENST00000411464 C1orf195Q5TG92 126 aa8.91□□□□□ -0.98
MRPL55-220ENST00000411464 A4D1N5 150 aa8.89□□□□□ -0.99
MRPL55-220ENST00000411464 TSTD3H0UI37 97 aa8.89□□□□□ -0.99
MRPL55-220ENST00000411464 HSD52Q0P140 79 aa8.89□□□□□ -0.99
MRPL55-220ENST00000411464 CEND1Q8N111 149 aa8.88□□□□□ -0.99
MRPL55-220ENST00000411464 FXYD2P54710 66 aa8.85□□□□□ -0.99
MRPL55-220ENST00000411464 SMIM29Q86T20 159 aa8.85□□□□□ -0.99
MRPL55-220ENST00000411464 TRBV7-6A0A0J9YX20 115 aa8.84□□□□□ -0.99
MRPL55-220ENST00000411464 TRAV13-2A0A0B4J235 113 aa8.83□□□□□ -1
MRPL55-220ENST00000411464 A0A0G2JQZ4 141 aa8.83□□□□□ -1
MRPL55-220ENST00000411464 A6NDN8 102 aa8.83□□□□□ -1
MRPL55-220ENST00000411464 TMEM238LA0A1B0GVL6 79 aa8.82□□□□□ -1
MRPL55-220ENST00000411464 A6NJY4 79 aa8.82□□□□□ -1
MRPL55-220ENST00000411464 TCL1BO95988 128 aa8.82□□□□□ -1
MRPL55-220ENST00000411464 CFC1P0CG37 223 aa8.82□□□□□ -1
MRPL55-220ENST00000411464 IGLV5-48A0A075B6I7 105 aa8.81□□□□□ -1
MRPL55-220ENST00000411464 A0A1B0GWB2 263 aa8.81□□□□□ -1
MRPL55-220ENST00000411464 A0A0B4J2C4 111 aa8.79□□□□□ -1
MRPL55-220ENST00000411464 BVES-AS1Q5T3Y7 98 aa8.79□□□□□ -1
MRPL55-220ENST00000411464 RAB37Q96AX2 223 aa8.79□□□□□ -1
MRPL55-220ENST00000411464 NHP2Q9NX24 153 aaKnown RBP8.78□□□□□ -1
MRPL55-220ENST00000411464 Q6Q795 121 aa8.77□□□□□ -1.01
MRPL55-220ENST00000411464 K7ERJ3 54 aa8.76□□□□□ -1.01
MRPL55-220ENST00000411464 M0R143 59 aa8.76□□□□□ -1.01
MRPL55-220ENST00000411464 SMIM11BQ8TCY0 68 aa8.75□□□□□ -1.01
MRPL55-220ENST00000411464 ATP11AUNQ6ZP68 121 aa8.74□□□□□ -1.01
MRPL55-220ENST00000411464 PRO1854Q9UHT4 67 aa8.74□□□□□ -1.01
MRPL55-220ENST00000411464 FLGP20930 4061 aaPredicted RBP8.74□□□□□ -1.01
MRPL55-220ENST00000411464 F8WEM9 126 aa8.72□□□□□ -1.01
MRPL55-220ENST00000411464 BATFQ16520 125 aa8.71□□□□□ -1.02
MRPL55-220ENST00000411464 PCP4L1A6NKN8 68 aa8.7□□□□□ -1.02
MRPL55-220ENST00000411464 KRTAP9-7A8MTY7 169 aa8.68□□□□□ -1.02
MRPL55-220ENST00000411464 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.68□□□□□ -1.02
MRPL55-220ENST00000411464 OBSCN-AS1Q96MR7 158 aa8.68□□□□□ -1.02
MRPL55-220ENST00000411464 Q75L30 129 aa8.67□□□□□ -1.02
MRPL55-220ENST00000411464 VAMP3Q15836 100 aa8.66□□□□□ -1.02
MRPL55-220ENST00000411464 Q6JHZ5 121 aa8.65□□□□□ -1.02
MRPL55-220ENST00000411464 TRBV7-7A0A0K0K1E9 115 aa8.64□□□□□ -1.03
MRPL55-220ENST00000411464 TRIAP1O43715 76 aa8.64□□□□□ -1.03
MRPL55-220ENST00000411464 SNHG12Q9BXW3 62 aa8.64□□□□□ -1.03
MRPL55-220ENST00000411464 PSMB2P49721 201 aa8.63□□□□□ -1.03
MRPL55-220ENST00000411464 CLEC2BQ92478 149 aa8.63□□□□□ -1.03
MRPL55-220ENST00000411464 IGFL1Q6UW32 110 aa8.61□□□□□ -1.03
MRPL55-220ENST00000411464 LINC00575Q6W349 94 aa8.61□□□□□ -1.03
MRPL55-220ENST00000411464 NAA38Q9BRA0 125 aaKnown RBP8.61□□□□□ -1.03
MRPL55-220ENST00000411464 H0YGX0 51 aa8.6□□□□□ -1.03
MRPL55-220ENST00000411464 OCIAD2Q56VL3 154 aa8.6□□□□□ -1.03
MRPL55-220ENST00000411464 hADV29S1A0JD25 119 aa8.59□□□□□ -1.03
MRPL55-220ENST00000411464 Q6ZQY7 126 aa8.59□□□□□ -1.03
MRPL55-220ENST00000411464 Q96NJ1 140 aa8.59□□□□□ -1.03
MRPL55-220ENST00000411464 KRTAP9-8Q9BYQ0 159 aa8.59□□□□□ -1.03
MRPL55-220ENST00000411464 FAM218AQ96MZ4 157 aa8.58□□□□□ -1.04
MRPL55-220ENST00000411464 LST1O00453 97 aa8.57□□□□□ -1.04
MRPL55-220ENST00000411464 TAX1BP3O14907 124 aa8.57□□□□□ -1.04
MRPL55-220ENST00000411464 COX6CP09669 75 aa8.57□□□□□ -1.04
MRPL55-220ENST00000411464 TRBV20-1A0A075B6N2 111 aa8.56□□□□□ -1.04
MRPL55-220ENST00000411464 SCGB1C2P0DMR2 95 aa8.56□□□□□ -1.04
MRPL55-220ENST00000411464 H3BUT2 72 aa8.54□□□□□ -1.04
MRPL55-220ENST00000411464 COL5A1-AS1Q5SY13 56 aa8.54□□□□□ -1.04
MRPL55-220ENST00000411464 USH2AO75445 5202 aa8.54□□□□□ -1.04
MRPL55-220ENST00000411464 C9orf118A6NHY6 69 aa8.53□□□□□ -1.04
MRPL55-220ENST00000411464 SSPOA2VEC9 5147 aa8.52□□□□□ -1.05
MRPL55-220ENST00000411464 A0A1B0GX51 115 aa8.52□□□□□ -1.05
MRPL55-220ENST00000411464 SNCGO76070 127 aa8.51□□□□□ -1.05
MRPL55-220ENST00000411464 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.51□□□□□ -1.05
MRPL55-220ENST00000411464 C20orf166-AS1Q96NR2 134 aa8.51□□□□□ -1.05
MRPL55-220ENST00000411464 PPDPFLQ8WWR9 84 aa8.5□□□□□ -1.05
MRPL55-220ENST00000411464 A0A1W2PPM0 123 aa8.48□□□□□ -1.05
MRPL55-220ENST00000411464 A8MUU9 505 aa8.48□□□□□ -1.05
MRPL55-220ENST00000411464 LYRM7Q5U5X0 104 aa8.48□□□□□ -1.05
MRPL55-220ENST00000411464 SS18L2Q9UHA2 77 aa8.48□□□□□ -1.05
MRPL55-220ENST00000411464 DNAL4O96015 105 aa8.47□□□□□ -1.05
MRPL55-220ENST00000411464 TRACP01848 142 aa8.46□□□□□ -1.06
MRPL55-220ENST00000411464 FABP2P12104 132 aa8.45□□□□□ -1.06
MRPL55-220ENST00000411464 ATXN8Q156A1 80 aa8.45□□□□□ -1.06
MRPL55-220ENST00000411464 MT2AP02795 61 aa8.43□□□□□ -1.06
MRPL55-220ENST00000411464 SMCPP49901 116 aaPredicted RBP8.43□□□□□ -1.06
MRPL55-220ENST00000411464 ORMDL1Q9P0S3 153 aa8.43□□□□□ -1.06
MRPL55-220ENST00000411464 FAM236DA0A1B0GTK5 79 aa8.42□□□□□ -1.06
MRPL55-220ENST00000411464 FAM236CP0DP71 79 aa8.42□□□□□ -1.06
MRPL55-220ENST00000411464 FCGBPQ9Y6R7 5405 aaPredicted RBP8.42□□□□□ -1.06
MRPL55-220ENST00000411464 TEN1Q86WV5 123 aa8.41□□□□□ -1.06
MRPL55-220ENST00000411464 GHRHP01286 108 aa8.4□□□□□ -1.06
MRPL55-220ENST00000411464 KRTAP19-1Q8IUB9 90 aa8.4□□□□□ -1.06
MRPL55-220ENST00000411464 SPCS1Q9Y6A9 102 aa8.4□□□□□ -1.06
MRPL55-220ENST00000411464 H3BQ85 93 aa8.38□□□□□ -1.07
MRPL55-220ENST00000411464 DSCR10P59022 87 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms