RNA–Protein interactions for RNA: ENST00000410007.5

PBRM1-208, Transcript of polybromo 1, humanhuman

TSL 1 (best) BASIC

Gene PBRM1, Length 4,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-208ENST00000410007 LCE6AA0A183 80 aa5.6□□□□□ -1.51
PBRM1-208ENST00000410007 Q8NDZ9 215 aa5.59□□□□□ -1.51
PBRM1-208ENST00000410007 OCR1Q9BZK8 76 aa5.59□□□□□ -1.51
PBRM1-208ENST00000410007 GCN1Q92616 2671 aaKnown RBP5.59□□□□□ -1.52
PBRM1-208ENST00000410007 KRTAP26-1Q6PEX3 210 aa5.59□□□□□ -1.52
PBRM1-208ENST00000410007 CFAP54Q96N23 3096 aa5.59□□□□□ -1.52
PBRM1-208ENST00000410007 UBR5O95071 2799 aaPredicted RBP5.57□□□□□ -1.52
PBRM1-208ENST00000410007 PRUNE2Q8WUY3 3088 aa5.57□□□□□ -1.52
PBRM1-208ENST00000410007 BRCA2P51587 3418 aa5.56□□□□□ -1.52
PBRM1-208ENST00000410007 CRIPTQ9P021 101 aa5.54□□□□□ -1.52
PBRM1-208ENST00000410007 MMP24-AS1A0A0U1RRL7 71 aa5.53□□□□□ -1.52
PBRM1-208ENST00000410007 MAP1AP78559 2803 aaPredicted RBP5.53□□□□□ -1.52
PBRM1-208ENST00000410007 KRTAP10-1P60331 282 aa5.52□□□□□ -1.53
PBRM1-208ENST00000410007 ZCCHC13Q8WW36 166 aaKnown RBP5.52□□□□□ -1.53
PBRM1-208ENST00000410007 LINC01554Q52M75 96 aa5.52□□□□□ -1.53
PBRM1-208ENST00000410007 HRES1P13985 223 aa5.51□□□□□ -1.53
PBRM1-208ENST00000410007 Q5VSD8 79 aa5.51□□□□□ -1.53
PBRM1-208ENST00000410007 KRTAP10-2P60368 255 aa5.5□□□□□ -1.53
PBRM1-208ENST00000410007 LINC00472Q9H8W2 130 aa5.5□□□□□ -1.53
PBRM1-208ENST00000410007 SPINT4Q6UDR6 99 aa5.5□□□□□ -1.53
PBRM1-208ENST00000410007 Q6ZR54 194 aa5.5□□□□□ -1.53
PBRM1-208ENST00000410007 NSD1Q96L73 2696 aaPredicted RBP5.49□□□□□ -1.53
PBRM1-208ENST00000410007 TRIOO75962 3097 aa5.49□□□□□ -1.53
PBRM1-208ENST00000410007 LAMA2P24043 3122 aaKnown RBP5.49□□□□□ -1.53
PBRM1-208ENST00000410007 A0A0D9SG42 100 aa5.48□□□□□ -1.53
PBRM1-208ENST00000410007 ITPR2Q14571 2701 aa5.48□□□□□ -1.53
PBRM1-208ENST00000410007 CDC42SE1Q9NRR8 79 aa5.46□□□□□ -1.53
PBRM1-208ENST00000410007 NBEAL2Q6ZNJ1 2754 aa5.46□□□□□ -1.54
PBRM1-208ENST00000410007 FLNCQ14315 2725 aa5.46□□□□□ -1.54
PBRM1-208ENST00000410007 M0R2T5 61 aa5.46□□□□□ -1.54
PBRM1-208ENST00000410007 SEC61BP60468 96 aaKnown RBP5.45□□□□□ -1.54
PBRM1-208ENST00000410007 LINC00483Q53H64 154 aa5.45□□□□□ -1.54
PBRM1-208ENST00000410007 ITPR1Q14643 2758 aa5.45□□□□□ -1.54
PBRM1-208ENST00000410007 KRTAP21-3Q3LHN1 58 aa5.44□□□□□ -1.54
PBRM1-208ENST00000410007 CSAG1Q6PB30 78 aa5.44□□□□□ -1.54
PBRM1-208ENST00000410007 Q8N9P0 234 aaPredicted RBP5.44□□□□□ -1.54
PBRM1-208ENST00000410007 STAB2Q8WWQ8 2551 aa5.43□□□□□ -1.54
PBRM1-208ENST00000410007 Q5W150 140 aa5.43□□□□□ -1.54
PBRM1-208ENST00000410007 A0A1B0GU33 70 aa5.42□□□□□ -1.54
PBRM1-208ENST00000410007 SPINK7P58062 85 aa5.42□□□□□ -1.54
PBRM1-208ENST00000410007 KRTAP4-16G5E9R7 235 aaPredicted RBP5.42□□□□□ -1.54
PBRM1-208ENST00000410007 Q1T7F1 81 aa5.42□□□□□ -1.54
PBRM1-208ENST00000410007 PANO1I0J062 215 aa5.42□□□□□ -1.54
PBRM1-208ENST00000410007 VPS13AQ96RL7 3174 aa5.41□□□□□ -1.54
PBRM1-208ENST00000410007 FP248Q71RG6 208 aaPredicted RBP5.4□□□□□ -1.54
PBRM1-208ENST00000410007 S4R3F8 94 aa5.4□□□□□ -1.55
PBRM1-208ENST00000410007 UNC80Q8N2C7 3258 aa5.4□□□□□ -1.55
PBRM1-208ENST00000410007 FLG2Q5D862 2391 aaPredicted RBP5.4□□□□□ -1.55
PBRM1-208ENST00000410007 CAMK2N1Q7Z7J9 78 aa5.4□□□□□ -1.55
PBRM1-208ENST00000410007 XIRP2A4UGR9 3374 aa5.39□□□□□ -1.55
PBRM1-208ENST00000410007 FRYQ5TBA9 3013 aa5.39□□□□□ -1.55
PBRM1-208ENST00000410007 KTN1-AS1Q86SY8 53 aa5.36□□□□□ -1.55
PBRM1-208ENST00000410007 Q6ZRN7 208 aaPredicted RBP5.36□□□□□ -1.55
PBRM1-208ENST00000410007 LINC01558Q9Y6Z2 57 aa5.36□□□□□ -1.55
PBRM1-208ENST00000410007 HIVEP1P15822 2718 aa5.36□□□□□ -1.55
PBRM1-208ENST00000410007 KMT2BQ9UMN6 2715 aaPredicted RBP5.35□□□□□ -1.55
PBRM1-208ENST00000410007 OXTP01178 125 aa5.35□□□□□ -1.55
PBRM1-208ENST00000410007 Q75L30 129 aa5.35□□□□□ -1.55
PBRM1-208ENST00000410007 DMAC1Q96GE9 116 aa5.34□□□□□ -1.55
PBRM1-208ENST00000410007 TACC2O95359 2948 aa5.34□□□□□ -1.55
PBRM1-208ENST00000410007 LCA10Q71F78 164 aa5.33□□□□□ -1.56
PBRM1-208ENST00000410007 A0A087X002 238 aa5.33□□□□□ -1.56
PBRM1-208ENST00000410007 ATMQ13315 3056 aa5.33□□□□□ -1.56
PBRM1-208ENST00000410007 DMBT1Q9UGM3 2413 aaPredicted RBP5.32□□□□□ -1.56
PBRM1-208ENST00000410007 CDH23Q9H251 3354 aa5.31□□□□□ -1.56
PBRM1-208ENST00000410007 COL12A1Q99715 3063 aa5.31□□□□□ -1.56
PBRM1-208ENST00000410007 R4GN34 69 aa5.3□□□□□ -1.56
PBRM1-208ENST00000410007 FRYLO94915 3013 aa5.3□□□□□ -1.56
PBRM1-208ENST00000410007 TENM4Q6N022 2769 aa5.29□□□□□ -1.56
PBRM1-208ENST00000410007 RPS29P62273 56 aaKnown RBP5.29□□□□□ -1.56
PBRM1-208ENST00000410007 ASB16-AS1Q495Z4 193 aa5.28□□□□□ -1.56
PBRM1-208ENST00000410007 KRTAP29-1A8MX34 341 aaPredicted RBP5.28□□□□□ -1.56
PBRM1-208ENST00000410007 UTP20O75691 2785 aaKnown RBP5.27□□□□□ -1.57
PBRM1-208ENST00000410007 NIPBLQ6KC79 2804 aaeCLIP5.26□□□□□ -1.57
PBRM1-208ENST00000410007 KRTAP11-1Q8IUC1 163 aa5.26□□□□□ -1.57
PBRM1-208ENST00000410007 CYSTM1Q9H1C7 97 aa5.26□□□□□ -1.57
PBRM1-208ENST00000410007 REV3LO60673 3130 aa5.25□□□□□ -1.57
PBRM1-208ENST00000410007 APCP25054 2843 aa5.24□□□□□ -1.57
PBRM1-208ENST00000410007 KRTAP7-1Q8IUC3 87 aa5.24□□□□□ -1.57
PBRM1-208ENST00000410007 SZT2Q5T011 3432 aa5.23□□□□□ -1.57
PBRM1-208ENST00000410007 LUZP6Q538Z0 58 aa5.22□□□□□ -1.57
PBRM1-208ENST00000410007 DMXL2Q8TDJ6 3036 aa5.22□□□□□ -1.57
PBRM1-208ENST00000410007 KALRNO60229 2985 aa5.22□□□□□ -1.57
PBRM1-208ENST00000410007 KRTAP13-1Q8IUC0 172 aa5.21□□□□□ -1.57
PBRM1-208ENST00000410007 Q5VV11 94 aa5.21□□□□□ -1.58
PBRM1-208ENST00000410007 TNRC18O15417 2968 aaPredicted RBP5.21□□□□□ -1.58
PBRM1-208ENST00000410007 Q5XG85 94 aa5.21□□□□□ -1.58
PBRM1-208ENST00000410007 ADGRG4Q8IZF6 3080 aa5.2□□□□□ -1.58
PBRM1-208ENST00000410007 COL6A3P12111 3177 aa5.19□□□□□ -1.58
PBRM1-208ENST00000410007 LRBAP50851 2863 aa5.19□□□□□ -1.58
PBRM1-208ENST00000410007 RPL37P61927 97 aaKnown RBP5.19□□□□□ -1.58
PBRM1-208ENST00000410007 KRTAP13-2Q52LG2 175 aa5.19□□□□□ -1.58
PBRM1-208ENST00000410007 NOTCH2NLQ7Z3S9 236 aa5.19□□□□□ -1.58
PBRM1-208ENST00000410007 M0QZ58 72 aa5.19□□□□□ -1.58
PBRM1-208ENST00000410007 LAMA1P25391 3075 aa5.18□□□□□ -1.58
PBRM1-208ENST00000410007 ZZEF1O43149 2961 aa5.17□□□□□ -1.58
PBRM1-208ENST00000410007 CELSR3Q9NYQ7 3312 aa5.17□□□□□ -1.58
PBRM1-208ENST00000410007 H1FX-AS1Q4G0G2 97 aa5.16□□□□□ -1.58
PBRM1-208ENST00000410007 BOD1L1Q8NFC6 3051 aa5.16□□□□□ -1.58
PBRM1-208ENST00000410007 EYSQ5T1H1 3165 aa5.15□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms