RNA–Protein interactions for RNA: ENST00000409769.6

CLK1-203, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 1,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-203ENST00000409769 FAT1Q14517 4588 aa2.42□□□□□ -2.02
CLK1-203ENST00000409769 TRAV13-2A0A0B4J235 113 aa2.42□□□□□ -2.02
CLK1-203ENST00000409769 M0R378 163 aa2.42□□□□□ -2.02
CLK1-203ENST00000409769 NCR3O14931 201 aa2.42□□□□□ -2.02
CLK1-203ENST00000409769 C22orf24Q9Y442 160 aa2.42□□□□□ -2.02
CLK1-203ENST00000409769 IGLV1-50A0A075B6I6 118 aa2.41□□□□□ -2.02
CLK1-203ENST00000409769 TRBV10-3A0A0K0K1G6 114 aa2.41□□□□□ -2.02
CLK1-203ENST00000409769 A6NDN8 102 aa2.41□□□□□ -2.02
CLK1-203ENST00000409769 M0QXV9 152 aa2.41□□□□□ -2.02
CLK1-203ENST00000409769 TAX1BP3O14907 124 aa2.41□□□□□ -2.02
CLK1-203ENST00000409769 TSPAN13O95857 204 aa2.41□□□□□ -2.02
CLK1-203ENST00000409769 SPRR1AP35321 89 aa2.41□□□□□ -2.02
CLK1-203ENST00000409769 RPL13AP40429 203 aaKnown RBP2.41□□□□□ -2.02
CLK1-203ENST00000409769 RPL28P46779 137 aaKnown RBP2.41□□□□□ -2.02
CLK1-203ENST00000409769 BATFQ16520 125 aa2.41□□□□□ -2.02
CLK1-203ENST00000409769 SCXQ7RTU7 201 aa2.41□□□□□ -2.02
CLK1-203ENST00000409769 PHF5AQ7RTV0 110 aaKnown RBP2.41□□□□□ -2.02
CLK1-203ENST00000409769 FAM19A5Q7Z5A7 132 aaPredicted RBP2.41□□□□□ -2.02
CLK1-203ENST00000409769 MRPL55Q7Z7F7 128 aaKnown RBP2.41□□□□□ -2.02
CLK1-203ENST00000409769 CIRBP-AS1Q8TBR5 109 aa2.41□□□□□ -2.02
CLK1-203ENST00000409769 RAB37Q96AX2 223 aa2.41□□□□□ -2.02
CLK1-203ENST00000409769 TMEM126AQ9H061 195 aa2.41□□□□□ -2.02
CLK1-203ENST00000409769 KCNQ1DNQ9H478 68 aa2.41□□□□□ -2.02
CLK1-203ENST00000409769 PRO1854Q9UHT4 67 aa2.41□□□□□ -2.02
CLK1-203ENST00000409769 VPS13BQ7Z7G8 4022 aa2.4□□□□□ -2.03
CLK1-203ENST00000409769 COL5A1-AS1Q5SY13 56 aa2.4□□□□□ -2.03
CLK1-203ENST00000409769 SMIM11BQ8TCY0 68 aa2.4□□□□□ -2.03
CLK1-203ENST00000409769 HSPG2P98160 4391 aa2.4□□□□□ -2.03
CLK1-203ENST00000409769 KIAA1109Q2LD37 5005 aa2.39□□□□□ -2.03
CLK1-203ENST00000409769 TRAV23DV6A0A075B6W5 121 aa2.39□□□□□ -2.03
CLK1-203ENST00000409769 C6orf99Q4VX62 202 aa2.39□□□□□ -2.03
CLK1-203ENST00000409769 S100A7L2Q5SY68 101 aa2.39□□□□□ -2.03
CLK1-203ENST00000409769 OR13C6PQ8NH95 151 aa2.39□□□□□ -2.03
CLK1-203ENST00000409769 TRBV7-6A0A0J9YX20 115 aa2.38□□□□□ -2.03
CLK1-203ENST00000409769 H3BUT2 72 aa2.38□□□□□ -2.03
CLK1-203ENST00000409769 H7C2G1 150 aa2.38□□□□□ -2.03
CLK1-203ENST00000409769 ZNF73O43830 326 aaPredicted RBP2.38□□□□□ -2.03
CLK1-203ENST00000409769 ELOF1P60002 83 aaKnown RBP2.38□□□□□ -2.03
CLK1-203ENST00000409769 HAMPP81172 84 aa2.38□□□□□ -2.03
CLK1-203ENST00000409769 KRTAP13-1Q8IUC0 172 aa2.38□□□□□ -2.03
CLK1-203ENST00000409769 DIRC1Q969H9 104 aa2.38□□□□□ -2.03
CLK1-203ENST00000409769 DPH3Q96FX2 82 aa2.38□□□□□ -2.03
CLK1-203ENST00000409769 NAA38Q9BRA0 125 aaKnown RBP2.38□□□□□ -2.03
CLK1-203ENST00000409769 CBY1Q9Y3M2 126 aa2.38□□□□□ -2.03
CLK1-203ENST00000409769 A0A1W2PPM0 123 aa2.37□□□□□ -2.03
CLK1-203ENST00000409769 UBE2BP63146 152 aa2.37□□□□□ -2.03
CLK1-203ENST00000409769 Q6ZRX8 168 aa2.37□□□□□ -2.03
CLK1-203ENST00000409769 Q9BRP9 147 aa2.37□□□□□ -2.03
CLK1-203ENST00000409769 PSORS1C2Q9UIG4 136 aa2.37□□□□□ -2.03
CLK1-203ENST00000409769 HERC2O95714 4834 aa2.36□□□□□ -2.03
CLK1-203ENST00000409769 A0A1B0GX51 115 aa2.36□□□□□ -2.03
CLK1-203ENST00000409769 H0YGX0 51 aa2.36□□□□□ -2.03
CLK1-203ENST00000409769 LST1O00453 97 aa2.36□□□□□ -2.03
CLK1-203ENST00000409769 BCE1O60756 84 aa2.36□□□□□ -2.03
CLK1-203ENST00000409769 TCL1BO95988 128 aa2.36□□□□□ -2.03
CLK1-203ENST00000409769 COX6CP09669 75 aa2.36□□□□□ -2.03
CLK1-203ENST00000409769 INAFM2P0DMQ5 153 aa2.36□□□□□ -2.03
CLK1-203ENST00000409769 COX7BP24311 80 aa2.36□□□□□ -2.03
CLK1-203ENST00000409769 PSMB2P49721 201 aa2.36□□□□□ -2.03
CLK1-203ENST00000409769 KRTAP10-4P60372 401 aaPredicted RBP2.36□□□□□ -2.03
CLK1-203ENST00000409769 DEFB116Q30KQ4 102 aa2.36□□□□□ -2.03
CLK1-203ENST00000409769 LYRM7Q5U5X0 104 aa2.36□□□□□ -2.03
CLK1-203ENST00000409769 LINC00575Q6W349 94 aa2.36□□□□□ -2.03
CLK1-203ENST00000409769 SMCR5Q8TEV8 140 aa2.36□□□□□ -2.03
CLK1-203ENST00000409769 CLEC2BQ92478 149 aa2.36□□□□□ -2.03
CLK1-203ENST00000409769 PKHD1L1Q86WI1 4243 aa2.35□□□□□ -2.03
CLK1-203ENST00000409769 TRBV20-1A0A075B6N2 111 aa2.35□□□□□ -2.03
CLK1-203ENST00000409769 A0A1B0GV90 55 aa2.35□□□□□ -2.03
CLK1-203ENST00000409769 ETDCA0A1B0GVM5 59 aa2.35□□□□□ -2.03
CLK1-203ENST00000409769 K7EP34 96 aa2.35□□□□□ -2.03
CLK1-203ENST00000409769 ERC2-IT1O76042 136 aa2.35□□□□□ -2.03
CLK1-203ENST00000409769 TRACP01848 142 aa2.35□□□□□ -2.03
CLK1-203ENST00000409769 IGLV7-43P04211 117 aa2.35□□□□□ -2.03
CLK1-203ENST00000409769 FABP2P12104 132 aa2.35□□□□□ -2.03
CLK1-203ENST00000409769 PRLHP81277 87 aa2.35□□□□□ -2.03
CLK1-203ENST00000409769 VAMP3Q15836 100 aa2.35□□□□□ -2.03
CLK1-203ENST00000409769 C1orf137Q5JT78 98 aa2.35□□□□□ -2.03
CLK1-203ENST00000409769 FAM19A1Q7Z5A9 133 aa2.35□□□□□ -2.03
CLK1-203ENST00000409769 SPCS1Q9Y6A9 102 aa2.35□□□□□ -2.03
CLK1-203ENST00000409769 IGLV5-48A0A075B6I7 105 aa2.34□□□□□ -2.03
CLK1-203ENST00000409769 hADV29S1A0JD25 119 aa2.34□□□□□ -2.03
CLK1-203ENST00000409769 SMR3BP02814 79 aaPredicted RBP2.34□□□□□ -2.03
CLK1-203ENST00000409769 SCGB1C2P0DMR2 95 aa2.34□□□□□ -2.03
CLK1-203ENST00000409769 ATXN8Q156A1 80 aa2.34□□□□□ -2.03
CLK1-203ENST00000409769 C5orf47Q569G3 176 aa2.34□□□□□ -2.03
CLK1-203ENST00000409769 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.34□□□□□ -2.03
CLK1-203ENST00000409769 LINC01600Q96MT4 127 aa2.34□□□□□ -2.03
CLK1-203ENST00000409769 FAT3Q8TDW7 4589 aa2.33□□□□□ -2.04
CLK1-203ENST00000409769 H3BMG7 143 aa2.33□□□□□ -2.04
CLK1-203ENST00000409769 SLC25A20O43772 301 aa2.33□□□□□ -2.04
CLK1-203ENST00000409769 SPRR1BP22528 89 aa2.33□□□□□ -2.04
CLK1-203ENST00000409769 UBE2AP49459 152 aa2.33□□□□□ -2.04
CLK1-203ENST00000409769 RPL37AP61513 92 aaKnown RBP2.33□□□□□ -2.04
CLK1-203ENST00000409769 Q6ZQY7 126 aa2.33□□□□□ -2.04
CLK1-203ENST00000409769 GTF2H5Q6ZYL4 71 aa2.33□□□□□ -2.04
CLK1-203ENST00000409769 ST20-AS1Q8NBB2 130 aa2.33□□□□□ -2.04
CLK1-203ENST00000409769 HIGD2AQ9BW72 106 aa2.33□□□□□ -2.04
CLK1-203ENST00000409769 C9JAW5 83 aa2.32□□□□□ -2.04
CLK1-203ENST00000409769 MOBPQ13875 183 aa2.32□□□□□ -2.04
CLK1-203ENST00000409769 LINC00483Q53H64 154 aa2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 100.3 ms