RNA–Protein interactions for RNA: ENST00000404354.3

SMC1B-202, Transcript of structural maintenance of chromosomes 1B, humanhuman

TSL 1 (best) BASIC

Gene SMC1B, Length 3,636 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1B-202ENST00000404354 STAB2Q8WWQ8 2551 aa6.08□□□□□ -1.44
SMC1B-202ENST00000404354 REG3GQ6UW15 175 aa6.07□□□□□ -1.44
SMC1B-202ENST00000404354 CMYA5Q8N3K9 4069 aa6.07□□□□□ -1.44
SMC1B-202ENST00000404354 SEC61GP60059 68 aa6.06□□□□□ -1.44
SMC1B-202ENST00000404354 LINC00588Q9Y4M8 146 aa6.06□□□□□ -1.44
SMC1B-202ENST00000404354 MP68P56378 58 aa6.06□□□□□ -1.44
SMC1B-202ENST00000404354 ZCCHC13Q8WW36 166 aaKnown RBP6.06□□□□□ -1.44
SMC1B-202ENST00000404354 SPTSSBQ8NFR3 76 aa6.05□□□□□ -1.44
SMC1B-202ENST00000404354 SPRR4Q96PI1 79 aa6.05□□□□□ -1.44
SMC1B-202ENST00000404354 CHTF8P0CG12 524 aa6.05□□□□□ -1.44
SMC1B-202ENST00000404354 H0Y9J4 135 aa6.04□□□□□ -1.44
SMC1B-202ENST00000404354 H0Y9P7 68 aa6.03□□□□□ -1.44
SMC1B-202ENST00000404354 CHKB-CPT1BH3BT56 60 aa6.03□□□□□ -1.44
SMC1B-202ENST00000404354 SPRR1AP35321 89 aa6.03□□□□□ -1.44
SMC1B-202ENST00000404354 UBE2AP49459 152 aa6.03□□□□□ -1.44
SMC1B-202ENST00000404354 PCOTHQ58A44 107 aa6.03□□□□□ -1.44
SMC1B-202ENST00000404354 DNAH10Q8IVF4 4471 aa6.03□□□□□ -1.44
SMC1B-202ENST00000404354 B9D2Q9BPU9 175 aa6.03□□□□□ -1.44
SMC1B-202ENST00000404354 J3QKU1 62 aa6.02□□□□□ -1.45
SMC1B-202ENST00000404354 PMAIP1Q13794 54 aa6.02□□□□□ -1.45
SMC1B-202ENST00000404354 Q1T7F1 81 aa6.02□□□□□ -1.45
SMC1B-202ENST00000404354 CASC2Q6XLA1 102 aa6.02□□□□□ -1.45
SMC1B-202ENST00000404354 LCE6AA0A183 80 aa6.01□□□□□ -1.45
SMC1B-202ENST00000404354 PRR15LQ9BU68 103 aa6.01□□□□□ -1.45
SMC1B-202ENST00000404354 LYSTQ99698 3801 aa6.01□□□□□ -1.45
SMC1B-202ENST00000404354 H3BNG1 76 aa6.01□□□□□ -1.45
SMC1B-202ENST00000404354 DNAH10OSP0CZ25 163 aa6.01□□□□□ -1.45
SMC1B-202ENST00000404354 PHF5AQ7RTV0 110 aaKnown RBP6.01□□□□□ -1.45
SMC1B-202ENST00000404354 KRTAP11-1Q8IUC1 163 aa6.01□□□□□ -1.45
SMC1B-202ENST00000404354 F8WDY8 70 aa5.99□□□□□ -1.45
SMC1B-202ENST00000404354 TLX1NBP0CAT3 122 aa5.99□□□□□ -1.45
SMC1B-202ENST00000404354 Q5VV11 94 aa5.98□□□□□ -1.45
SMC1B-202ENST00000404354 PRR15Q8IV56 129 aa5.98□□□□□ -1.45
SMC1B-202ENST00000404354 CNBPP62633 177 aaKnown RBP5.97□□□□□ -1.45
SMC1B-202ENST00000404354 NDUFB1O75438 58 aa5.97□□□□□ -1.45
SMC1B-202ENST00000404354 NDUFS5O43920 106 aa5.96□□□□□ -1.46
SMC1B-202ENST00000404354 PLA2G2DQ9UNK4 145 aa5.96□□□□□ -1.46
SMC1B-202ENST00000404354 IGLV9-49A0A0B4J1Y8 123 aa5.96□□□□□ -1.46
SMC1B-202ENST00000404354 CYP4F30PQ9H0H9 118 aa5.96□□□□□ -1.46
SMC1B-202ENST00000404354 A0A1B0GW54 56 aa5.95□□□□□ -1.46
SMC1B-202ENST00000404354 KRTAP1-5Q9BYS1 174 aa5.95□□□□□ -1.46
SMC1B-202ENST00000404354 A6NED7 52 aa5.95□□□□□ -1.46
SMC1B-202ENST00000404354 Q8N9P0 234 aaPredicted RBP5.95□□□□□ -1.46
SMC1B-202ENST00000404354 IGLV5-37A0A075B6J1 123 aa5.94□□□□□ -1.46
SMC1B-202ENST00000404354 SPAG11AQ6PDA7 123 aa5.94□□□□□ -1.46
SMC1B-202ENST00000404354 KRTAP29-1A8MX34 341 aaPredicted RBP5.94□□□□□ -1.46
SMC1B-202ENST00000404354 C16orf90A8MZG2 172 aa5.93□□□□□ -1.46
SMC1B-202ENST00000404354 COA5Q86WW8 74 aa5.92□□□□□ -1.46
SMC1B-202ENST00000404354 ANAPC11Q9NYG5 84 aa5.91□□□□□ -1.46
SMC1B-202ENST00000404354 DNAH3Q8TD57 4116 aa5.9□□□□□ -1.46
SMC1B-202ENST00000404354 A8MWP4 228 aa5.9□□□□□ -1.46
SMC1B-202ENST00000404354 IGHV6-1A0A0B4J1U7 121 aa5.89□□□□□ -1.47
SMC1B-202ENST00000404354 LCA10Q71F78 164 aa5.89□□□□□ -1.47
SMC1B-202ENST00000404354 UBE2DNLQ8IWF7 75 aa5.89□□□□□ -1.47
SMC1B-202ENST00000404354 PANO1I0J062 215 aa5.89□□□□□ -1.47
SMC1B-202ENST00000404354 LINC00472Q9H8W2 130 aa5.89□□□□□ -1.47
SMC1B-202ENST00000404354 KRTAP24-1Q3LI83 254 aa5.88□□□□□ -1.47
SMC1B-202ENST00000404354 MMP24-AS1A0A0U1RRL7 71 aa5.87□□□□□ -1.47
SMC1B-202ENST00000404354 CD164Q04900 197 aa5.87□□□□□ -1.47
SMC1B-202ENST00000404354 SPINK6Q6UWN8 80 aa5.87□□□□□ -1.47
SMC1B-202ENST00000404354 DNAH9Q9NYC9 4486 aa5.87□□□□□ -1.47
SMC1B-202ENST00000404354 K7EIL1 84 aa5.86□□□□□ -1.47
SMC1B-202ENST00000404354 LIMD2Q9BT23 127 aa5.86□□□□□ -1.47
SMC1B-202ENST00000404354 C9orf163Q8N9P6 203 aa5.86□□□□□ -1.47
SMC1B-202ENST00000404354 A0A087X002 238 aa5.84□□□□□ -1.47
SMC1B-202ENST00000404354 NOTCH2NLQ7Z3S9 236 aa5.84□□□□□ -1.47
SMC1B-202ENST00000404354 IGLV8-61A0A075B6I0 122 aa5.84□□□□□ -1.47
SMC1B-202ENST00000404354 SPANXA2-OT1Q8N9U9 137 aa5.83□□□□□ -1.48
SMC1B-202ENST00000404354 PRR26Q8N8Z3 221 aa5.82□□□□□ -1.48
SMC1B-202ENST00000404354 RETNLBQ9BQ08 111 aa5.82□□□□□ -1.48
SMC1B-202ENST00000404354 SPINK7P58062 85 aa5.82□□□□□ -1.48
SMC1B-202ENST00000404354 HUWE1Q7Z6Z7 4374 aaKnown RBP5.81□□□□□ -1.48
SMC1B-202ENST00000404354 DNAH1Q9P2D7 4330 aa5.81□□□□□ -1.48
SMC1B-202ENST00000404354 MOBPQ13875 183 aa5.81□□□□□ -1.48
SMC1B-202ENST00000404354 IGLV7-46A0A075B6I9 117 aa5.81□□□□□ -1.48
SMC1B-202ENST00000404354 CDK2AP2O75956 126 aa5.8□□□□□ -1.48
SMC1B-202ENST00000404354 LOC101927531A0A1B0GV80 90 aa5.79□□□□□ -1.48
SMC1B-202ENST00000404354 C8orf17Q9NRJ1 99 aa5.79□□□□□ -1.48
SMC1B-202ENST00000404354 H3BPC8 53 aa5.79□□□□□ -1.48
SMC1B-202ENST00000404354 HRES1P13985 223 aa5.79□□□□□ -1.48
SMC1B-202ENST00000404354 RBM12B-AS1Q9P1G2 102 aa5.79□□□□□ -1.48
SMC1B-202ENST00000404354 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.79□□□□□ -1.48
SMC1B-202ENST00000404354 TGP01266 2768 aa5.79□□□□□ -1.48
SMC1B-202ENST00000404354 DNAH7Q8WXX0 4024 aa5.78□□□□□ -1.48
SMC1B-202ENST00000404354 KTN1-AS1Q86SY8 53 aa5.78□□□□□ -1.48
SMC1B-202ENST00000404354 Q75L30 129 aa5.77□□□□□ -1.49
SMC1B-202ENST00000404354 Q96NJ1 140 aa5.77□□□□□ -1.49
SMC1B-202ENST00000404354 ATP11AUNQ6ZP68 121 aa5.76□□□□□ -1.49
SMC1B-202ENST00000404354 SPRR1BP22528 89 aa5.75□□□□□ -1.49
SMC1B-202ENST00000404354 Q5W150 140 aa5.74□□□□□ -1.49
SMC1B-202ENST00000404354 FRAS1Q86XX4 4008 aa5.74□□□□□ -1.49
SMC1B-202ENST00000404354 FBN3Q75N90 2809 aa5.74□□□□□ -1.49
SMC1B-202ENST00000404354 A0A1B0GVX0 72 aa5.73□□□□□ -1.49
SMC1B-202ENST00000404354 PRAC1Q96KF2 57 aa5.73□□□□□ -1.49
SMC1B-202ENST00000404354 CDC42SE1Q9NRR8 79 aa5.73□□□□□ -1.49
SMC1B-202ENST00000404354 MRPL34Q9BQ48 92 aaKnown RBP5.73□□□□□ -1.49
SMC1B-202ENST00000404354 A6NN06 94 aa5.72□□□□□ -1.49
SMC1B-202ENST00000404354 CIRBP-AS1Q8TBR5 109 aa5.72□□□□□ -1.49
SMC1B-202ENST00000404354 TP53AIP1Q9HCN2 124 aa5.71□□□□□ -1.5
SMC1B-202ENST00000404354 LINC01558Q9Y6Z2 57 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms