RNA–Protein interactions for RNA: ENST00000400181.8

KDM1A-202, Transcript of lysine demethylase 1A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KDM1A, Length 3,059 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1A-202ENST00000400181 PLA2G2DQ9UNK4 145 aa11.46□□□□□ -0.57
KDM1A-202ENST00000400181 LINC00588Q9Y4M8 146 aa11.46□□□□□ -0.57
KDM1A-202ENST00000400181 TRAV22A0A0B4J277 110 aa11.44□□□□□ -0.58
KDM1A-202ENST00000400181 NBEAL1Q6ZS30 2694 aa11.43□□□□□ -0.58
KDM1A-202ENST00000400181 MP68P56378 58 aa11.43□□□□□ -0.58
KDM1A-202ENST00000400181 V9GYY9 64 aa11.43□□□□□ -0.58
KDM1A-202ENST00000400181 IGLV5-37A0A075B6J1 123 aa11.42□□□□□ -0.58
KDM1A-202ENST00000400181 A0A096LNI7 61 aa11.42□□□□□ -0.58
KDM1A-202ENST00000400181 A8MUN3 132 aa11.41□□□□□ -0.58
KDM1A-202ENST00000400181 Q1T7F1 81 aa11.41□□□□□ -0.58
KDM1A-202ENST00000400181 CSMD3Q7Z407 3707 aa11.39□□□□□ -0.59
KDM1A-202ENST00000400181 KMT2BQ9UMN6 2715 aaPredicted RBP11.39□□□□□ -0.59
KDM1A-202ENST00000400181 UBE2AP49459 152 aa11.37□□□□□ -0.59
KDM1A-202ENST00000400181 A8MU10 97 aa11.37□□□□□ -0.59
KDM1A-202ENST00000400181 H0Y9P7 68 aa11.34□□□□□ -0.59
KDM1A-202ENST00000400181 B9D2Q9BPU9 175 aa11.34□□□□□ -0.59
KDM1A-202ENST00000400181 CYP4F30PQ9H0H9 118 aa11.34□□□□□ -0.59
KDM1A-202ENST00000400181 NDUFB1O75438 58 aa11.34□□□□□ -0.59
KDM1A-202ENST00000400181 CASC2Q6XLA1 102 aa11.34□□□□□ -0.59
KDM1A-202ENST00000400181 CHTF8P0CG12 524 aa11.31□□□□□ -0.6
KDM1A-202ENST00000400181 PRR15Q8IV56 129 aa11.3□□□□□ -0.6
KDM1A-202ENST00000400181 H0Y9J4 135 aa11.29□□□□□ -0.6
KDM1A-202ENST00000400181 PHF5AQ7RTV0 110 aaKnown RBP11.28□□□□□ -0.6
KDM1A-202ENST00000400181 SEC61GP60059 68 aa11.27□□□□□ -0.6
KDM1A-202ENST00000400181 KRTAP11-1Q8IUC1 163 aa11.27□□□□□ -0.6
KDM1A-202ENST00000400181 CNBPP62633 177 aaKnown RBP11.27□□□□□ -0.61
KDM1A-202ENST00000400181 KRTAP29-1A8MX34 341 aaPredicted RBP11.27□□□□□ -0.61
KDM1A-202ENST00000400181 COL7A1Q02388 2944 aa11.27□□□□□ -0.61
KDM1A-202ENST00000400181 PMAIP1Q13794 54 aa11.26□□□□□ -0.61
KDM1A-202ENST00000400181 DNAH10Q8IVF4 4471 aa11.25□□□□□ -0.61
KDM1A-202ENST00000400181 CHKB-CPT1BH3BT56 60 aa11.25□□□□□ -0.61
KDM1A-202ENST00000400181 PRR15LQ9BU68 103 aa11.23□□□□□ -0.61
KDM1A-202ENST00000400181 Q5VV11 94 aa11.23□□□□□ -0.61
KDM1A-202ENST00000400181 STAB2Q8WWQ8 2551 aa11.22□□□□□ -0.61
KDM1A-202ENST00000400181 C16orf90A8MZG2 172 aa11.22□□□□□ -0.61
KDM1A-202ENST00000400181 TENM2Q9NT68 2774 aa11.22□□□□□ -0.61
KDM1A-202ENST00000400181 PCOTHQ58A44 107 aa11.22□□□□□ -0.61
KDM1A-202ENST00000400181 KRTAP1-5Q9BYS1 174 aa11.22□□□□□ -0.61
KDM1A-202ENST00000400181 IGLV8-61A0A075B6I0 122 aa11.2□□□□□ -0.62
KDM1A-202ENST00000400181 A8MWP4 228 aa11.2□□□□□ -0.62
KDM1A-202ENST00000400181 MGAM2Q2M2H8 2515 aa11.19□□□□□ -0.62
KDM1A-202ENST00000400181 Q8N9P0 234 aaPredicted RBP11.18□□□□□ -0.62
KDM1A-202ENST00000400181 SPTSSBQ8NFR3 76 aa11.18□□□□□ -0.62
KDM1A-202ENST00000400181 LYSTQ99698 3801 aa11.17□□□□□ -0.62
KDM1A-202ENST00000400181 LINC00472Q9H8W2 130 aa11.17□□□□□ -0.62
KDM1A-202ENST00000400181 KRTAP24-1Q3LI83 254 aa11.15□□□□□ -0.62
KDM1A-202ENST00000400181 DNAH1Q9P2D7 4330 aa11.14□□□□□ -0.63
KDM1A-202ENST00000400181 IGLV9-49A0A0B4J1Y8 123 aa11.13□□□□□ -0.63
KDM1A-202ENST00000400181 SPANXA2-OT1Q8N9U9 137 aa11.13□□□□□ -0.63
KDM1A-202ENST00000400181 COA5Q86WW8 74 aa11.12□□□□□ -0.63
KDM1A-202ENST00000400181 MMP24-AS1A0A0U1RRL7 71 aa11.1□□□□□ -0.63
KDM1A-202ENST00000400181 NDUFS5O43920 106 aa11.1□□□□□ -0.63
KDM1A-202ENST00000400181 UBE2DNLQ8IWF7 75 aa11.1□□□□□ -0.63
KDM1A-202ENST00000400181 C9orf163Q8N9P6 203 aa11.1□□□□□ -0.63
KDM1A-202ENST00000400181 LIMD2Q9BT23 127 aa11.1□□□□□ -0.63
KDM1A-202ENST00000400181 A6NED7 52 aa11.1□□□□□ -0.63
KDM1A-202ENST00000400181 H3BPC8 53 aa11.09□□□□□ -0.63
KDM1A-202ENST00000400181 SPAG11AQ6PDA7 123 aa11.05□□□□□ -0.64
KDM1A-202ENST00000400181 CMYA5Q8N3K9 4069 aa11.05□□□□□ -0.64
KDM1A-202ENST00000400181 PANO1I0J062 215 aa11.04□□□□□ -0.64
KDM1A-202ENST00000400181 SPRR1BP22528 89 aa11.03□□□□□ -0.64
KDM1A-202ENST00000400181 CD164Q04900 197 aa11.03□□□□□ -0.64
KDM1A-202ENST00000400181 IGHV6-1A0A0B4J1U7 121 aa11.03□□□□□ -0.64
KDM1A-202ENST00000400181 DNAH9Q9NYC9 4486 aa11.02□□□□□ -0.64
KDM1A-202ENST00000400181 LCA10Q71F78 164 aa11.02□□□□□ -0.65
KDM1A-202ENST00000400181 HUWE1Q7Z6Z7 4374 aaKnown RBP11.02□□□□□ -0.65
KDM1A-202ENST00000400181 IGLV7-46A0A075B6I9 117 aa11.01□□□□□ -0.65
KDM1A-202ENST00000400181 K7EIL1 84 aa11□□□□□ -0.65
KDM1A-202ENST00000400181 ANAPC11Q9NYG5 84 aa10.97□□□□□ -0.65
KDM1A-202ENST00000400181 C8orf17Q9NRJ1 99 aa10.95□□□□□ -0.66
KDM1A-202ENST00000400181 Q96NJ1 140 aa10.95□□□□□ -0.66
KDM1A-202ENST00000400181 Q75L30 129 aa10.94□□□□□ -0.66
KDM1A-202ENST00000400181 MOBPQ13875 183 aa10.93□□□□□ -0.66
KDM1A-202ENST00000400181 C14orf177Q52M58 125 aa10.93□□□□□ -0.66
KDM1A-202ENST00000400181 CDK2AP2O75956 126 aa10.92□□□□□ -0.66
KDM1A-202ENST00000400181 A0A087X002 238 aa10.92□□□□□ -0.66
KDM1A-202ENST00000400181 NOTCH2NLQ7Z3S9 236 aa10.92□□□□□ -0.66
KDM1A-202ENST00000400181 LOC101927531A0A1B0GV80 90 aa10.91□□□□□ -0.66
KDM1A-202ENST00000400181 SPINK6Q6UWN8 80 aa10.9□□□□□ -0.67
KDM1A-202ENST00000400181 TP53AIP1Q9HCN2 124 aa10.89□□□□□ -0.67
KDM1A-202ENST00000400181 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.89□□□□□ -0.67
KDM1A-202ENST00000400181 DNAH3Q8TD57 4116 aa10.88□□□□□ -0.67
KDM1A-202ENST00000400181 HRES1P13985 223 aa10.88□□□□□ -0.67
KDM1A-202ENST00000400181 ATP11AUNQ6ZP68 121 aa10.87□□□□□ -0.67
KDM1A-202ENST00000400181 KTN1-AS1Q86SY8 53 aa10.87□□□□□ -0.67
KDM1A-202ENST00000400181 KRTAP13-1Q8IUC0 172 aa10.87□□□□□ -0.67
KDM1A-202ENST00000400181 A0A1B0GVX0 72 aa10.86□□□□□ -0.67
KDM1A-202ENST00000400181 SPINK7P58062 85 aa10.86□□□□□ -0.67
KDM1A-202ENST00000400181 APLNQ9ULZ1 77 aa10.84□□□□□ -0.67
KDM1A-202ENST00000400181 MRPL34Q9BQ48 92 aaKnown RBP10.83□□□□□ -0.68
KDM1A-202ENST00000400181 DNAH7Q8WXX0 4024 aa10.83□□□□□ -0.68
KDM1A-202ENST00000400181 PRR26Q8N8Z3 221 aa10.83□□□□□ -0.68
KDM1A-202ENST00000400181 Q6ZR54 194 aa10.83□□□□□ -0.68
KDM1A-202ENST00000400181 CDC42SE1Q9NRR8 79 aa10.83□□□□□ -0.68
KDM1A-202ENST00000400181 LINC01558Q9Y6Z2 57 aa10.82□□□□□ -0.68
KDM1A-202ENST00000400181 ASB16-AS1Q495Z4 193 aa10.82□□□□□ -0.68
KDM1A-202ENST00000400181 RBM12B-AS1Q9P1G2 102 aa10.79□□□□□ -0.68
KDM1A-202ENST00000400181 A6NN06 94 aa10.78□□□□□ -0.68
KDM1A-202ENST00000400181 NBDYA0A0U1RRE5 68 aa10.77□□□□□ -0.68
KDM1A-202ENST00000400181 WWC2-AS2Q96NR7 200 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms