RNA–Protein interactions for RNA: ENST00000399451.6

ANKRD28-201, Transcript of ankyrin repeat domain 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ANKRD28, Length 6,564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD28-201ENST00000399451 FLNAP21333 2647 aaKnown RBP12.88□□□□□ -0.35
ANKRD28-201ENST00000399451 KRTAP1-5Q9BYS1 174 aa12.87□□□□□ -0.35
ANKRD28-201ENST00000399451 R4GN34 69 aa12.87□□□□□ -0.35
ANKRD28-201ENST00000399451 PRRC2CQ9Y520 2896 aaKnown RBP12.86□□□□□ -0.35
ANKRD28-201ENST00000399451 KRTAP10-2P60368 255 aa12.86□□□□□ -0.35
ANKRD28-201ENST00000399451 ITPR3Q14573 2671 aa12.84□□□□□ -0.35
ANKRD28-201ENST00000399451 HELZ2Q9BYK8 2649 aaKnown RBP12.8□□□□□ -0.36
ANKRD28-201ENST00000399451 OXTP01178 125 aa12.77□□□□□ -0.36
ANKRD28-201ENST00000399451 ATRQ13535 2644 aa12.69□□□□□ -0.38
ANKRD28-201ENST00000399451 KRTAP4-16G5E9R7 235 aaPredicted RBP12.68□□□□□ -0.38
ANKRD28-201ENST00000399451 Q6ZR54 194 aa12.68□□□□□ -0.38
ANKRD28-201ENST00000399451 MAST4O15021 2626 aa12.67□□□□□ -0.38
ANKRD28-201ENST00000399451 M0QZ58 72 aa12.62□□□□□ -0.39
ANKRD28-201ENST00000399451 RPL37P61927 97 aaKnown RBP12.62□□□□□ -0.39
ANKRD28-201ENST00000399451 C5orf42Q9H799 3197 aa12.61□□□□□ -0.39
ANKRD28-201ENST00000399451 H1FX-AS1Q4G0G2 97 aa12.61□□□□□ -0.39
ANKRD28-201ENST00000399451 ROMO1P60602 79 aa12.61□□□□□ -0.39
ANKRD28-201ENST00000399451 KRTAP29-1A8MX34 341 aaPredicted RBP12.6□□□□□ -0.39
ANKRD28-201ENST00000399451 CEP350Q5VT06 3117 aa12.6□□□□□ -0.39
ANKRD28-201ENST00000399451 PLAC4Q8WY50 150 aa12.6□□□□□ -0.39
ANKRD28-201ENST00000399451 CHD7Q9P2D1 2997 aa12.59□□□□□ -0.39
ANKRD28-201ENST00000399451 CFAP46Q8IYW2 2715 aa12.59□□□□□ -0.39
ANKRD28-201ENST00000399451 UTRNP46939 3433 aa12.55□□□□□ -0.4
ANKRD28-201ENST00000399451 H3BS24 57 aa12.55□□□□□ -0.4
ANKRD28-201ENST00000399451 PANO1I0J062 215 aa12.54□□□□□ -0.4
ANKRD28-201ENST00000399451 ADM2Q7Z4H4 148 aa12.48□□□□□ -0.41
ANKRD28-201ENST00000399451 A0A0A0MQY5 61 aa12.47□□□□□ -0.41
ANKRD28-201ENST00000399451 ASB16-AS1Q495Z4 193 aa12.44□□□□□ -0.42
ANKRD28-201ENST00000399451 A0A087X002 238 aa12.42□□□□□ -0.42
ANKRD28-201ENST00000399451 SPATA8Q6RVD6 105 aa12.4□□□□□ -0.42
ANKRD28-201ENST00000399451 STAB1Q9NY15 2570 aa12.37□□□□□ -0.43
ANKRD28-201ENST00000399451 CHD9Q3L8U1 2897 aa12.36□□□□□ -0.43
ANKRD28-201ENST00000399451 NOTCH2NLQ7Z3S9 236 aa12.36□□□□□ -0.43
ANKRD28-201ENST00000399451 KRTAP11-1Q8IUC1 163 aa12.29□□□□□ -0.44
ANKRD28-201ENST00000399451 FLG2Q5D862 2391 aaPredicted RBP12.26□□□□□ -0.45
ANKRD28-201ENST00000399451 TEX15Q9BXT5 2789 aa12.24□□□□□ -0.45
ANKRD28-201ENST00000399451 RPS29P62273 56 aaKnown RBP12.22□□□□□ -0.45
ANKRD28-201ENST00000399451 KRTAP7-1Q8IUC3 87 aa12.21□□□□□ -0.45
ANKRD28-201ENST00000399451 PCNTO95613 3336 aa12.19□□□□□ -0.46
ANKRD28-201ENST00000399451 Q6ZRN7 208 aaPredicted RBP12.18□□□□□ -0.46
ANKRD28-201ENST00000399451 HTTP42858 3142 aa12.17□□□□□ -0.46
ANKRD28-201ENST00000399451 TEP1Q99973 2627 aaKnown RBP12.15□□□□□ -0.46
ANKRD28-201ENST00000399451 A6NN06 94 aa12.15□□□□□ -0.46
ANKRD28-201ENST00000399451 CFAP54Q96N23 3096 aa12.11□□□□□ -0.47
ANKRD28-201ENST00000399451 NBEAL1Q6ZS30 2694 aa12.11□□□□□ -0.47
ANKRD28-201ENST00000399451 CHD6Q8TD26 2715 aa12.11□□□□□ -0.47
ANKRD28-201ENST00000399451 AKAP13Q12802 2813 aa12.11□□□□□ -0.47
ANKRD28-201ENST00000399451 CENPEQ02224 2701 aa12.08□□□□□ -0.48
ANKRD28-201ENST00000399451 KRTAP13-1Q8IUC0 172 aa12.08□□□□□ -0.48
ANKRD28-201ENST00000399451 SETXQ7Z333 2677 aaKnown RBP12.07□□□□□ -0.48
ANKRD28-201ENST00000399451 KRTAP25-1Q3LHN0 102 aa12.07□□□□□ -0.48
ANKRD28-201ENST00000399451 A8MUU9 505 aa12.07□□□□□ -0.48
ANKRD28-201ENST00000399451 TRANK1O15050 2925 aa12.06□□□□□ -0.48
ANKRD28-201ENST00000399451 MGAQ8IWI9 3026 aa12.06□□□□□ -0.48
ANKRD28-201ENST00000399451 A8MU10 97 aa12.06□□□□□ -0.48
ANKRD28-201ENST00000399451 C20orf166-AS1Q96NR2 134 aa12.05□□□□□ -0.48
ANKRD28-201ENST00000399451 KRTAP13-2Q52LG2 175 aa12.04□□□□□ -0.48
ANKRD28-201ENST00000399451 BAHCC1Q9P281 2608 aa12.03□□□□□ -0.48
ANKRD28-201ENST00000399451 A0A0C4DFX4 3053 aa12.01□□□□□ -0.49
ANKRD28-201ENST00000399451 GCN1Q92616 2671 aaKnown RBP11.99□□□□□ -0.49
ANKRD28-201ENST00000399451 KRTAP21-3Q3LHN1 58 aa11.98□□□□□ -0.49
ANKRD28-201ENST00000399451 COL6A5A8TX70 2615 aa11.97□□□□□ -0.49
ANKRD28-201ENST00000399451 MKI67P46013 3256 aaKnown RBP11.97□□□□□ -0.49
ANKRD28-201ENST00000399451 UNC79Q9P2D8 2635 aa11.95□□□□□ -0.5
ANKRD28-201ENST00000399451 DMBT1Q9UGM3 2413 aaPredicted RBP11.91□□□□□ -0.5
ANKRD28-201ENST00000399451 RANBP2P49792 3224 aaKnown RBP11.88□□□□□ -0.51
ANKRD28-201ENST00000399451 ZNF292O60281 2723 aa11.87□□□□□ -0.51
ANKRD28-201ENST00000399451 KRTAP16-1A8MUX0 517 aa11.82□□□□□ -0.52
ANKRD28-201ENST00000399451 LAMA3Q16787 3333 aa11.78□□□□□ -0.52
ANKRD28-201ENST00000399451 NBEAL2Q6ZNJ1 2754 aa11.76□□□□□ -0.53
ANKRD28-201ENST00000399451 TRIOO75962 3097 aa11.75□□□□□ -0.53
ANKRD28-201ENST00000399451 NOTCH1P46531 2555 aa11.72□□□□□ -0.53
ANKRD28-201ENST00000399451 LAMA2P24043 3122 aaKnown RBP11.71□□□□□ -0.53
ANKRD28-201ENST00000399451 WDFY4Q6ZS81 3184 aa11.7□□□□□ -0.54
ANKRD28-201ENST00000399451 ITPR2Q14571 2701 aa11.67□□□□□ -0.54
ANKRD28-201ENST00000399451 IGSF10Q6WRI0 2623 aa11.67□□□□□ -0.54
ANKRD28-201ENST00000399451 TNP1P09430 55 aa11.66□□□□□ -0.54
ANKRD28-201ENST00000399451 NDUFAF8A1L188 74 aa11.62□□□□□ -0.55
ANKRD28-201ENST00000399451 STAB2Q8WWQ8 2551 aa11.6□□□□□ -0.55
ANKRD28-201ENST00000399451 FRYQ5TBA9 3013 aa11.6□□□□□ -0.55
ANKRD28-201ENST00000399451 BRCA2P51587 3418 aa11.58□□□□□ -0.56
ANKRD28-201ENST00000399451 A0A1B0GVY2 172 aa11.55□□□□□ -0.56
ANKRD28-201ENST00000399451 DSPP15924 2871 aaKnown RBP11.54□□□□□ -0.56
ANKRD28-201ENST00000399451 KMT2BQ9UMN6 2715 aaPredicted RBP11.53□□□□□ -0.56
ANKRD28-201ENST00000399451 PRUNE2Q8WUY3 3088 aa11.51□□□□□ -0.57
ANKRD28-201ENST00000399451 NSD1Q96L73 2696 aaPredicted RBP11.49□□□□□ -0.57
ANKRD28-201ENST00000399451 KRTAP10-8P60410 259 aa11.48□□□□□ -0.57
ANKRD28-201ENST00000399451 UBR5O95071 2799 aaPredicted RBP11.47□□□□□ -0.57
ANKRD28-201ENST00000399451 UNC80Q8N2C7 3258 aa11.46□□□□□ -0.57
ANKRD28-201ENST00000399451 XIRP2A4UGR9 3374 aa11.45□□□□□ -0.58
ANKRD28-201ENST00000399451 XP32Q5T750 250 aa11.45□□□□□ -0.58
ANKRD28-201ENST00000399451 VPS13AQ96RL7 3174 aa11.43□□□□□ -0.58
ANKRD28-201ENST00000399451 C10orf95Q9H7T3 257 aa11.42□□□□□ -0.58
ANKRD28-201ENST00000399451 KRTAP1-4P0C5Y4 121 aa11.42□□□□□ -0.58
ANKRD28-201ENST00000399451 MAP1AP78559 2803 aaPredicted RBP11.39□□□□□ -0.59
ANKRD28-201ENST00000399451 KALRNO60229 2985 aa11.36□□□□□ -0.59
ANKRD28-201ENST00000399451 CDH23Q9H251 3354 aa11.36□□□□□ -0.59
ANKRD28-201ENST00000399451 CELSR3Q9NYQ7 3312 aa11.35□□□□□ -0.59
ANKRD28-201ENST00000399451 PP632Q6XCG6 107 aa11.31□□□□□ -0.6
ANKRD28-201ENST00000399451 KRTAP10-10P60014 251 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 93.1 ms