RNA–Protein interactions for RNA: ENST00000399352.5

ITSN1-209, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 5,408 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-209ENST00000399352 KRTAP1-3Q8IUG1 177 aa9.84□□□□□ -0.83
ITSN1-209ENST00000399352 ITPR3Q14573 2671 aa9.82□□□□□ -0.84
ITSN1-209ENST00000399352 S4R3F8 94 aa9.81□□□□□ -0.84
ITSN1-209ENST00000399352 KRTAP1-1Q07627 177 aa9.81□□□□□ -0.84
ITSN1-209ENST00000399352 STAB1Q9NY15 2570 aa9.79□□□□□ -0.84
ITSN1-209ENST00000399352 SPRR1BP22528 89 aa9.76□□□□□ -0.85
ITSN1-209ENST00000399352 CHD6Q8TD26 2715 aa9.75□□□□□ -0.85
ITSN1-209ENST00000399352 ROMO1P60602 79 aa9.75□□□□□ -0.85
ITSN1-209ENST00000399352 RPL37P61927 97 aaKnown RBP9.74□□□□□ -0.85
ITSN1-209ENST00000399352 NBEAL1Q6ZS30 2694 aa9.74□□□□□ -0.85
ITSN1-209ENST00000399352 PLAC8Q9NZF1 115 aa9.73□□□□□ -0.85
ITSN1-209ENST00000399352 KRTAP26-1Q6PEX3 210 aa9.72□□□□□ -0.85
ITSN1-209ENST00000399352 R4GN34 69 aa9.72□□□□□ -0.85
ITSN1-209ENST00000399352 CENPEQ02224 2701 aa9.7□□□□□ -0.86
ITSN1-209ENST00000399352 M0R2T5 61 aa9.69□□□□□ -0.86
ITSN1-209ENST00000399352 PCNTO95613 3336 aa9.68□□□□□ -0.86
ITSN1-209ENST00000399352 H1FX-AS1Q4G0G2 97 aa9.66□□□□□ -0.86
ITSN1-209ENST00000399352 DMBT1Q9UGM3 2413 aaPredicted RBP9.66□□□□□ -0.86
ITSN1-209ENST00000399352 NOTCH1P46531 2555 aa9.64□□□□□ -0.87
ITSN1-209ENST00000399352 SPATA8Q6RVD6 105 aa9.64□□□□□ -0.87
ITSN1-209ENST00000399352 CFAP54Q96N23 3096 aa9.62□□□□□ -0.87
ITSN1-209ENST00000399352 C5orf42Q9H799 3197 aa9.62□□□□□ -0.87
ITSN1-209ENST00000399352 UNC79Q9P2D8 2635 aa9.6□□□□□ -0.87
ITSN1-209ENST00000399352 KRTAP1-5Q9BYS1 174 aa9.59□□□□□ -0.87
ITSN1-209ENST00000399352 Q6ZR54 194 aa9.59□□□□□ -0.87
ITSN1-209ENST00000399352 A0A0C4DFX4 3053 aa9.58□□□□□ -0.88
ITSN1-209ENST00000399352 KRTAP29-1A8MX34 341 aaPredicted RBP9.58□□□□□ -0.88
ITSN1-209ENST00000399352 STAB2Q8WWQ8 2551 aa9.56□□□□□ -0.88
ITSN1-209ENST00000399352 GCN1Q92616 2671 aaKnown RBP9.56□□□□□ -0.88
ITSN1-209ENST00000399352 ASB16-AS1Q495Z4 193 aa9.55□□□□□ -0.88
ITSN1-209ENST00000399352 M0QZ58 72 aa9.55□□□□□ -0.88
ITSN1-209ENST00000399352 CFAP46Q8IYW2 2715 aa9.55□□□□□ -0.88
ITSN1-209ENST00000399352 HELZ2Q9BYK8 2649 aaKnown RBP9.54□□□□□ -0.88
ITSN1-209ENST00000399352 A6NN06 94 aa9.51□□□□□ -0.89
ITSN1-209ENST00000399352 KRTAP16-1A8MUX0 517 aa9.51□□□□□ -0.89
ITSN1-209ENST00000399352 TEX15Q9BXT5 2789 aa9.49□□□□□ -0.89
ITSN1-209ENST00000399352 KRTAP4-16G5E9R7 235 aaPredicted RBP9.49□□□□□ -0.89
ITSN1-209ENST00000399352 ADM2Q7Z4H4 148 aa9.46□□□□□ -0.89
ITSN1-209ENST00000399352 TEP1Q99973 2627 aaKnown RBP9.46□□□□□ -0.9
ITSN1-209ENST00000399352 A0A087X002 238 aa9.45□□□□□ -0.9
ITSN1-209ENST00000399352 NOTCH2NLQ7Z3S9 236 aa9.45□□□□□ -0.9
ITSN1-209ENST00000399352 BRCA2P51587 3418 aa9.43□□□□□ -0.9
ITSN1-209ENST00000399352 KRTAP25-1Q3LHN0 102 aa9.43□□□□□ -0.9
ITSN1-209ENST00000399352 COL6A5A8TX70 2615 aa9.43□□□□□ -0.9
ITSN1-209ENST00000399352 PANO1I0J062 215 aa9.42□□□□□ -0.9
ITSN1-209ENST00000399352 A8MU10 97 aa9.42□□□□□ -0.9
ITSN1-209ENST00000399352 NBEAL2Q6ZNJ1 2754 aa9.4□□□□□ -0.91
ITSN1-209ENST00000399352 HTTP42858 3142 aa9.4□□□□□ -0.91
ITSN1-209ENST00000399352 KRTAP10-1P60331 282 aa9.38□□□□□ -0.91
ITSN1-209ENST00000399352 LAMA2P24043 3122 aaKnown RBP9.37□□□□□ -0.91
ITSN1-209ENST00000399352 CHD7Q9P2D1 2997 aa9.37□□□□□ -0.91
ITSN1-209ENST00000399352 KRTAP10-2P60368 255 aa9.36□□□□□ -0.91
ITSN1-209ENST00000399352 SEC61BP60468 96 aaKnown RBP9.35□□□□□ -0.91
ITSN1-209ENST00000399352 NDUFAF8A1L188 74 aa9.34□□□□□ -0.91
ITSN1-209ENST00000399352 MGAQ8IWI9 3026 aa9.3□□□□□ -0.92
ITSN1-209ENST00000399352 MAP1AP78559 2803 aaPredicted RBP9.29□□□□□ -0.92
ITSN1-209ENST00000399352 Q5VSD8 79 aa9.29□□□□□ -0.92
ITSN1-209ENST00000399352 SETXQ7Z333 2677 aaKnown RBP9.29□□□□□ -0.92
ITSN1-209ENST00000399352 LCE6AA0A183 80 aa9.27□□□□□ -0.92
ITSN1-209ENST00000399352 FREM2Q5SZK8 3169 aa9.27□□□□□ -0.92
ITSN1-209ENST00000399352 PLAC4Q8WY50 150 aa9.25□□□□□ -0.93
ITSN1-209ENST00000399352 KRTAP11-1Q8IUC1 163 aa9.24□□□□□ -0.93
ITSN1-209ENST00000399352 BAHCC1Q9P281 2608 aa9.21□□□□□ -0.93
ITSN1-209ENST00000399352 C20orf166-AS1Q96NR2 134 aa9.18□□□□□ -0.94
ITSN1-209ENST00000399352 NSD1Q96L73 2696 aaPredicted RBP9.17□□□□□ -0.94
ITSN1-209ENST00000399352 UBR5O95071 2799 aaPredicted RBP9.14□□□□□ -0.95
ITSN1-209ENST00000399352 MKI67P46013 3256 aaKnown RBP9.14□□□□□ -0.95
ITSN1-209ENST00000399352 KRTAP7-1Q8IUC3 87 aa9.14□□□□□ -0.95
ITSN1-209ENST00000399352 WDFY4Q6ZS81 3184 aa9.12□□□□□ -0.95
ITSN1-209ENST00000399352 ZNF292O60281 2723 aa9.12□□□□□ -0.95
ITSN1-209ENST00000399352 A8MUU9 505 aa9.11□□□□□ -0.95
ITSN1-209ENST00000399352 CHD9Q3L8U1 2897 aa9.08□□□□□ -0.96
ITSN1-209ENST00000399352 RANBP2P49792 3224 aaKnown RBP9.08□□□□□ -0.96
ITSN1-209ENST00000399352 FRYQ5TBA9 3013 aa9.07□□□□□ -0.96
ITSN1-209ENST00000399352 LAMA3Q16787 3333 aa9.06□□□□□ -0.96
ITSN1-209ENST00000399352 TRIOO75962 3097 aa9.06□□□□□ -0.96
ITSN1-209ENST00000399352 KRTAP13-2Q52LG2 175 aa9□□□□□ -0.97
ITSN1-209ENST00000399352 ITPR1Q14643 2758 aa8.98□□□□□ -0.97
ITSN1-209ENST00000399352 PRUNE2Q8WUY3 3088 aa8.96□□□□□ -0.98
ITSN1-209ENST00000399352 C10orf95Q9H7T3 257 aa8.96□□□□□ -0.98
ITSN1-209ENST00000399352 KRTAP13-1Q8IUC0 172 aa8.95□□□□□ -0.98
ITSN1-209ENST00000399352 TRANK1O15050 2925 aa8.94□□□□□ -0.98
ITSN1-209ENST00000399352 ASH1LQ9NR48 2969 aaKnown RBP8.94□□□□□ -0.98
ITSN1-209ENST00000399352 RPS29P62273 56 aaKnown RBP8.93□□□□□ -0.98
ITSN1-209ENST00000399352 Q6ZRN7 208 aaPredicted RBP8.93□□□□□ -0.98
ITSN1-209ENST00000399352 KALRNO60229 2985 aa8.93□□□□□ -0.98
ITSN1-209ENST00000399352 DSPP15924 2871 aaKnown RBP8.92□□□□□ -0.98
ITSN1-209ENST00000399352 CDH23Q9H251 3354 aa8.9□□□□□ -0.99
ITSN1-209ENST00000399352 DMXL2Q8TDJ6 3036 aa8.89□□□□□ -0.99
ITSN1-209ENST00000399352 VPS13AQ96RL7 3174 aa8.89□□□□□ -0.99
ITSN1-209ENST00000399352 APCP25054 2843 aa8.88□□□□□ -0.99
ITSN1-209ENST00000399352 XIRP2A4UGR9 3374 aa8.86□□□□□ -0.99
ITSN1-209ENST00000399352 KMT2BQ9UMN6 2715 aaPredicted RBP8.85□□□□□ -0.99
ITSN1-209ENST00000399352 TNP1P09430 55 aa8.85□□□□□ -0.99
ITSN1-209ENST00000399352 REV3LO60673 3130 aa8.85□□□□□ -0.99
ITSN1-209ENST00000399352 IGSF10Q6WRI0 2623 aa8.83□□□□□ -1
ITSN1-209ENST00000399352 TACC2O95359 2948 aa8.81□□□□□ -1
ITSN1-209ENST00000399352 UNC80Q8N2C7 3258 aa8.79□□□□□ -1
ITSN1-209ENST00000399352 CELSR3Q9NYQ7 3312 aa8.78□□□□□ -1
ITSN1-209ENST00000399352 HIVEP1P15822 2718 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms