RNA–Protein interactions for RNA: ENST00000399050.8

CTNND1-205, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,313 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-205ENST00000399050 Q6ZR54 194 aa5.2□□□□□ -1.58
CTNND1-205ENST00000399050 KRTAP29-1A8MX34 341 aaPredicted RBP5.2□□□□□ -1.58
CTNND1-205ENST00000399050 M0R2T5 61 aa5.19□□□□□ -1.58
CTNND1-205ENST00000399050 HTTP42858 3142 aa5.19□□□□□ -1.58
CTNND1-205ENST00000399050 KRTAP4-16G5E9R7 235 aaPredicted RBP5.18□□□□□ -1.58
CTNND1-205ENST00000399050 S4R3F8 94 aa5.18□□□□□ -1.58
CTNND1-205ENST00000399050 H1FX-AS1Q4G0G2 97 aa5.17□□□□□ -1.58
CTNND1-205ENST00000399050 CHD9Q3L8U1 2897 aa5.17□□□□□ -1.58
CTNND1-205ENST00000399050 KRTAP16-1A8MUX0 517 aa5.16□□□□□ -1.58
CTNND1-205ENST00000399050 ASB16-AS1Q495Z4 193 aa5.16□□□□□ -1.58
CTNND1-205ENST00000399050 ROMO1P60602 79 aa5.16□□□□□ -1.58
CTNND1-205ENST00000399050 KRTAP1-5Q9BYS1 174 aa5.15□□□□□ -1.58
CTNND1-205ENST00000399050 A6NN06 94 aa5.15□□□□□ -1.59
CTNND1-205ENST00000399050 LAMA2P24043 3122 aaKnown RBP5.14□□□□□ -1.59
CTNND1-205ENST00000399050 Q6ZSA8 131 aa5.14□□□□□ -1.59
CTNND1-205ENST00000399050 FASNP49327 2511 aaKnown RBP5.12□□□□□ -1.59
CTNND1-205ENST00000399050 RPL37P61927 97 aaKnown RBP5.11□□□□□ -1.59
CTNND1-205ENST00000399050 LCE6AA0A183 80 aa5.11□□□□□ -1.59
CTNND1-205ENST00000399050 BRCA2P51587 3418 aa5.11□□□□□ -1.59
CTNND1-205ENST00000399050 SPATA8Q6RVD6 105 aa5.1□□□□□ -1.59
CTNND1-205ENST00000399050 TRIOO75962 3097 aa5.1□□□□□ -1.59
CTNND1-205ENST00000399050 A0A087X002 238 aa5.08□□□□□ -1.6
CTNND1-205ENST00000399050 NOTCH2NLQ7Z3S9 236 aa5.08□□□□□ -1.6
CTNND1-205ENST00000399050 EPG5Q9HCE0 2579 aa5.07□□□□□ -1.6
CTNND1-205ENST00000399050 TRANK1O15050 2925 aa5.07□□□□□ -1.6
CTNND1-205ENST00000399050 A8MU10 97 aa5.07□□□□□ -1.6
CTNND1-205ENST00000399050 DNAH14Q0VDD8 3507 aa5.06□□□□□ -1.6
CTNND1-205ENST00000399050 PANO1I0J062 215 aa5.06□□□□□ -1.6
CTNND1-205ENST00000399050 FLNAP21333 2647 aaKnown RBP5.05□□□□□ -1.6
CTNND1-205ENST00000399050 R4GN34 69 aa5.05□□□□□ -1.6
CTNND1-205ENST00000399050 ADM2Q7Z4H4 148 aa5.04□□□□□ -1.6
CTNND1-205ENST00000399050 KRTAP25-1Q3LHN0 102 aa5.03□□□□□ -1.6
CTNND1-205ENST00000399050 LAMA3Q16787 3333 aa5.03□□□□□ -1.6
CTNND1-205ENST00000399050 KRTAP11-1Q8IUC1 163 aa5.02□□□□□ -1.61
CTNND1-205ENST00000399050 CELSR3Q9NYQ7 3312 aa5.01□□□□□ -1.61
CTNND1-205ENST00000399050 USP24Q9UPU5 2620 aa5.01□□□□□ -1.61
CTNND1-205ENST00000399050 ITPR3Q14573 2671 aa5.01□□□□□ -1.61
CTNND1-205ENST00000399050 MGAQ8IWI9 3026 aa5.01□□□□□ -1.61
CTNND1-205ENST00000399050 KRTAP7-1Q8IUC3 87 aa5.01□□□□□ -1.61
CTNND1-205ENST00000399050 XIRP2A4UGR9 3374 aa5□□□□□ -1.61
CTNND1-205ENST00000399050 UNC80Q8N2C7 3258 aa5□□□□□ -1.61
CTNND1-205ENST00000399050 RANBP2P49792 3224 aaKnown RBP4.99□□□□□ -1.61
CTNND1-205ENST00000399050 KRTAP10-1P60331 282 aa4.99□□□□□ -1.61
CTNND1-205ENST00000399050 KRTAP10-2P60368 255 aa4.99□□□□□ -1.61
CTNND1-205ENST00000399050 CDH23Q9H251 3354 aa4.98□□□□□ -1.61
CTNND1-205ENST00000399050 M0QZ58 72 aa4.96□□□□□ -1.61
CTNND1-205ENST00000399050 C20orf166-AS1Q96NR2 134 aa4.96□□□□□ -1.61
CTNND1-205ENST00000399050 FRYQ5TBA9 3013 aa4.96□□□□□ -1.62
CTNND1-205ENST00000399050 FREM2Q5SZK8 3169 aa4.94□□□□□ -1.62
CTNND1-205ENST00000399050 ATRQ13535 2644 aa4.94□□□□□ -1.62
CTNND1-205ENST00000399050 VPS13AQ96RL7 3174 aa4.94□□□□□ -1.62
CTNND1-205ENST00000399050 CHD6Q8TD26 2715 aa4.92□□□□□ -1.62
CTNND1-205ENST00000399050 WDFY4Q6ZS81 3184 aa4.92□□□□□ -1.62
CTNND1-205ENST00000399050 PRUNE2Q8WUY3 3088 aa4.92□□□□□ -1.62
CTNND1-205ENST00000399050 HECTD1Q9ULT8 2610 aa4.91□□□□□ -1.62
CTNND1-205ENST00000399050 FLG2Q5D862 2391 aaPredicted RBP4.9□□□□□ -1.62
CTNND1-205ENST00000399050 MGAM2Q2M2H8 2515 aa4.9□□□□□ -1.62
CTNND1-205ENST00000399050 GCN1Q92616 2671 aaKnown RBP4.89□□□□□ -1.63
CTNND1-205ENST00000399050 KRTAP13-1Q8IUC0 172 aa4.89□□□□□ -1.63
CTNND1-205ENST00000399050 LAMA1P25391 3075 aa4.89□□□□□ -1.63
CTNND1-205ENST00000399050 VCANP13611 3396 aa4.88□□□□□ -1.63
CTNND1-205ENST00000399050 AKAP13Q12802 2813 aa4.88□□□□□ -1.63
CTNND1-205ENST00000399050 KALRNO60229 2985 aa4.88□□□□□ -1.63
CTNND1-205ENST00000399050 NDUFAF8A1L188 74 aa4.87□□□□□ -1.63
CTNND1-205ENST00000399050 Q5VSD8 79 aa4.87□□□□□ -1.63
CTNND1-205ENST00000399050 DSPP15924 2871 aaKnown RBP4.86□□□□□ -1.63
CTNND1-205ENST00000399050 SEC61BP60468 96 aaKnown RBP4.86□□□□□ -1.63
CTNND1-205ENST00000399050 Q6ZRN7 208 aaPredicted RBP4.85□□□□□ -1.63
CTNND1-205ENST00000399050 SZT2Q5T011 3432 aa4.85□□□□□ -1.63
CTNND1-205ENST00000399050 COL6A3P12111 3177 aa4.85□□□□□ -1.63
CTNND1-205ENST00000399050 NBEAL2Q6ZNJ1 2754 aa4.84□□□□□ -1.63
CTNND1-205ENST00000399050 KRTAP13-2Q52LG2 175 aa4.84□□□□□ -1.63
CTNND1-205ENST00000399050 UNC79Q9P2D8 2635 aa4.83□□□□□ -1.64
CTNND1-205ENST00000399050 CFAP46Q8IYW2 2715 aa4.83□□□□□ -1.64
CTNND1-205ENST00000399050 RPS29P62273 56 aaKnown RBP4.83□□□□□ -1.64
CTNND1-205ENST00000399050 A8MUU9 505 aa4.82□□□□□ -1.64
CTNND1-205ENST00000399050 NBEAQ8NFP9 2946 aa4.81□□□□□ -1.64
CTNND1-205ENST00000399050 REV3LO60673 3130 aa4.81□□□□□ -1.64
CTNND1-205ENST00000399050 MAST4O15021 2626 aa4.79□□□□□ -1.64
CTNND1-205ENST00000399050 LRBAP50851 2863 aa4.79□□□□□ -1.64
CTNND1-205ENST00000399050 CENPEQ02224 2701 aa4.79□□□□□ -1.64
CTNND1-205ENST00000399050 NBEAL1Q6ZS30 2694 aa4.79□□□□□ -1.64
CTNND1-205ENST00000399050 TEX15Q9BXT5 2789 aa4.76□□□□□ -1.65
CTNND1-205ENST00000399050 HELZ2Q9BYK8 2649 aaKnown RBP4.76□□□□□ -1.65
CTNND1-205ENST00000399050 FRYLO94915 3013 aa4.76□□□□□ -1.65
CTNND1-205ENST00000399050 ZNF292O60281 2723 aa4.75□□□□□ -1.65
CTNND1-205ENST00000399050 ZZEF1O43149 2961 aa4.75□□□□□ -1.65
CTNND1-205ENST00000399050 C10orf95Q9H7T3 257 aa4.75□□□□□ -1.65
CTNND1-205ENST00000399050 DMBT1Q9UGM3 2413 aaPredicted RBP4.73□□□□□ -1.65
CTNND1-205ENST00000399050 SPTBN5Q9NRC6 3674 aaKnown RBP4.72□□□□□ -1.65
CTNND1-205ENST00000399050 SETXQ7Z333 2677 aaKnown RBP4.71□□□□□ -1.66
CTNND1-205ENST00000399050 H0YAA0 97 aa4.7□□□□□ -1.66
CTNND1-205ENST00000399050 ADGRG4Q8IZF6 3080 aa4.7□□□□□ -1.66
CTNND1-205ENST00000399050 FLNBO75369 2602 aaKnown RBP4.7□□□□□ -1.66
CTNND1-205ENST00000399050 MAP1AP78559 2803 aaPredicted RBP4.7□□□□□ -1.66
CTNND1-205ENST00000399050 BOD1L1Q8NFC6 3051 aa4.7□□□□□ -1.66
CTNND1-205ENST00000399050 SPEGQ15772 3267 aa4.68□□□□□ -1.66
CTNND1-205ENST00000399050 TEP1Q99973 2627 aaKnown RBP4.68□□□□□ -1.66
CTNND1-205ENST00000399050 USP34Q70CQ2 3546 aa4.68□□□□□ -1.66
CTNND1-205ENST00000399050 ITPR1Q14643 2758 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 100.8 ms