RNA–Protein interactions for RNA: ENST00000398868.7

ATL3-201, Transcript of atlastin GTPase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ATL3, Length 7,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-201ENST00000398868 FAM104AQ969W3 186 aa6.03□□□□□ -1.44
ATL3-201ENST00000398868 IGLV7-43P04211 117 aa6.02□□□□□ -1.45
ATL3-201ENST00000398868 KRTAP1-3Q8IUG1 177 aa6.01□□□□□ -1.45
ATL3-201ENST00000398868 MAP1AP78559 2803 aaPredicted RBP6.01□□□□□ -1.45
ATL3-201ENST00000398868 CYSTM1Q9H1C7 97 aa6.01□□□□□ -1.45
ATL3-201ENST00000398868 KCNQ1DNQ9H478 68 aa6.01□□□□□ -1.45
ATL3-201ENST00000398868 CSAG1Q6PB30 78 aa6□□□□□ -1.45
ATL3-201ENST00000398868 Q5XG85 94 aa5.99□□□□□ -1.45
ATL3-201ENST00000398868 ASPMQ8IZT6 3477 aa5.99□□□□□ -1.45
ATL3-201ENST00000398868 TEX15Q9BXT5 2789 aa5.99□□□□□ -1.45
ATL3-201ENST00000398868 Q1T7F1 81 aa5.99□□□□□ -1.45
ATL3-201ENST00000398868 HELZ2Q9BYK8 2649 aaKnown RBP5.99□□□□□ -1.45
ATL3-201ENST00000398868 TEP1Q99973 2627 aaKnown RBP5.98□□□□□ -1.45
ATL3-201ENST00000398868 A0A096LNT2 108 aa5.98□□□□□ -1.45
ATL3-201ENST00000398868 Q6ZSA8 131 aa5.98□□□□□ -1.45
ATL3-201ENST00000398868 LINC00612Q8N6U2 182 aa5.97□□□□□ -1.45
ATL3-201ENST00000398868 CHD6Q8TD26 2715 aa5.97□□□□□ -1.45
ATL3-201ENST00000398868 A0A1W2PNM2 257 aa5.97□□□□□ -1.45
ATL3-201ENST00000398868 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.96□□□□□ -1.45
ATL3-201ENST00000398868 BOD1L1Q8NFC6 3051 aa5.96□□□□□ -1.46
ATL3-201ENST00000398868 KRTAP1-1Q07627 177 aa5.95□□□□□ -1.46
ATL3-201ENST00000398868 IGLV7-46A0A075B6I9 117 aa5.94□□□□□ -1.46
ATL3-201ENST00000398868 SPANXA2-OT1Q8N9U9 137 aa5.93□□□□□ -1.46
ATL3-201ENST00000398868 FP248Q71RG6 208 aaPredicted RBP5.92□□□□□ -1.46
ATL3-201ENST00000398868 OCR1Q9BZK8 76 aa5.92□□□□□ -1.46
ATL3-201ENST00000398868 DMXL2Q8TDJ6 3036 aa5.92□□□□□ -1.46
ATL3-201ENST00000398868 FRYLO94915 3013 aa5.92□□□□□ -1.46
ATL3-201ENST00000398868 SETXQ7Z333 2677 aaKnown RBP5.92□□□□□ -1.46
ATL3-201ENST00000398868 FLG2Q5D862 2391 aaPredicted RBP5.91□□□□□ -1.46
ATL3-201ENST00000398868 Q75L30 129 aa5.9□□□□□ -1.47
ATL3-201ENST00000398868 SPRR4Q96PI1 79 aa5.9□□□□□ -1.47
ATL3-201ENST00000398868 SPINK7P58062 85 aa5.9□□□□□ -1.47
ATL3-201ENST00000398868 TRANK1O15050 2925 aa5.9□□□□□ -1.47
ATL3-201ENST00000398868 ATMQ13315 3056 aa5.89□□□□□ -1.47
ATL3-201ENST00000398868 A0A1B0GU33 70 aa5.89□□□□□ -1.47
ATL3-201ENST00000398868 PRR34Q9NV39 138 aa5.89□□□□□ -1.47
ATL3-201ENST00000398868 CHD9Q3L8U1 2897 aa5.88□□□□□ -1.47
ATL3-201ENST00000398868 KALRNO60229 2985 aa5.88□□□□□ -1.47
ATL3-201ENST00000398868 DSPP15924 2871 aaKnown RBP5.87□□□□□ -1.47
ATL3-201ENST00000398868 CAMK2N1Q7Z7J9 78 aa5.87□□□□□ -1.47
ATL3-201ENST00000398868 Q5VV11 94 aa5.87□□□□□ -1.47
ATL3-201ENST00000398868 HRES1P13985 223 aa5.86□□□□□ -1.47
ATL3-201ENST00000398868 Q5VSD8 79 aa5.84□□□□□ -1.47
ATL3-201ENST00000398868 Q8N9P0 234 aaPredicted RBP5.84□□□□□ -1.47
ATL3-201ENST00000398868 OXTP01178 125 aa5.84□□□□□ -1.47
ATL3-201ENST00000398868 COL12A1Q99715 3063 aa5.84□□□□□ -1.47
ATL3-201ENST00000398868 CNBPP62633 177 aaKnown RBP5.84□□□□□ -1.48
ATL3-201ENST00000398868 LINC00483Q53H64 154 aa5.83□□□□□ -1.48
ATL3-201ENST00000398868 A0A0A0MQY5 61 aa5.83□□□□□ -1.48
ATL3-201ENST00000398868 LRBAP50851 2863 aa5.83□□□□□ -1.48
ATL3-201ENST00000398868 ADGRG4Q8IZF6 3080 aa5.82□□□□□ -1.48
ATL3-201ENST00000398868 TLX1NBP0CAT3 122 aa5.81□□□□□ -1.48
ATL3-201ENST00000398868 LOC400499M0QZD8 3231 aa5.8□□□□□ -1.48
ATL3-201ENST00000398868 ASH1LQ9NR48 2969 aaKnown RBP5.78□□□□□ -1.48
ATL3-201ENST00000398868 KRTAP10-2P60368 255 aa5.78□□□□□ -1.48
ATL3-201ENST00000398868 LINC01558Q9Y6Z2 57 aa5.78□□□□□ -1.48
ATL3-201ENST00000398868 STAB1Q9NY15 2570 aa5.76□□□□□ -1.49
ATL3-201ENST00000398868 COL6A5A8TX70 2615 aa5.75□□□□□ -1.49
ATL3-201ENST00000398868 DCHS1Q96JQ0 3298 aa5.75□□□□□ -1.49
ATL3-201ENST00000398868 TACC2O95359 2948 aa5.75□□□□□ -1.49
ATL3-201ENST00000398868 BAHCC1Q9P281 2608 aa5.75□□□□□ -1.49
ATL3-201ENST00000398868 NBEAL2Q6ZNJ1 2754 aa5.73□□□□□ -1.49
ATL3-201ENST00000398868 LAMA5O15230 3695 aa5.73□□□□□ -1.49
ATL3-201ENST00000398868 KRTAP10-1P60331 282 aa5.73□□□□□ -1.49
ATL3-201ENST00000398868 NBEAL1Q6ZS30 2694 aa5.73□□□□□ -1.49
ATL3-201ENST00000398868 KRTAP1-5Q9BYS1 174 aa5.73□□□□□ -1.49
ATL3-201ENST00000398868 S4R3F8 94 aa5.73□□□□□ -1.49
ATL3-201ENST00000398868 DMAC1Q96GE9 116 aa5.72□□□□□ -1.49
ATL3-201ENST00000398868 UNC79Q9P2D8 2635 aa5.72□□□□□ -1.49
ATL3-201ENST00000398868 Q8NDZ9 215 aa5.71□□□□□ -1.5
ATL3-201ENST00000398868 ZZEF1O43149 2961 aa5.7□□□□□ -1.5
ATL3-201ENST00000398868 MMP24-AS1A0A0U1RRL7 71 aa5.7□□□□□ -1.5
ATL3-201ENST00000398868 SPATA8Q6RVD6 105 aa5.69□□□□□ -1.5
ATL3-201ENST00000398868 ZFHX4Q86UP3 3567 aa5.68□□□□□ -1.5
ATL3-201ENST00000398868 ROMO1P60602 79 aa5.67□□□□□ -1.5
ATL3-201ENST00000398868 Q5W150 140 aa5.67□□□□□ -1.5
ATL3-201ENST00000398868 GCN1Q92616 2671 aaKnown RBP5.67□□□□□ -1.5
ATL3-201ENST00000398868 KRTAP16-1A8MUX0 517 aa5.67□□□□□ -1.5
ATL3-201ENST00000398868 KLK9Q2XQG4 91 aa5.67□□□□□ -1.5
ATL3-201ENST00000398868 R4GN34 69 aa5.64□□□□□ -1.51
ATL3-201ENST00000398868 NBPF19A0A087WUL8 3843 aa5.64□□□□□ -1.51
ATL3-201ENST00000398868 PANO1I0J062 215 aa5.63□□□□□ -1.51
ATL3-201ENST00000398868 ZCCHC13Q8WW36 166 aaKnown RBP5.63□□□□□ -1.51
ATL3-201ENST00000398868 TNRC18O15417 2968 aaPredicted RBP5.63□□□□□ -1.51
ATL3-201ENST00000398868 H1FX-AS1Q4G0G2 97 aa5.62□□□□□ -1.51
ATL3-201ENST00000398868 ADM2Q7Z4H4 148 aa5.62□□□□□ -1.51
ATL3-201ENST00000398868 LCE6AA0A183 80 aa5.62□□□□□ -1.51
ATL3-201ENST00000398868 DMXL1Q9Y485 3027 aa5.62□□□□□ -1.51
ATL3-201ENST00000398868 RELNP78509 3460 aa5.61□□□□□ -1.51
ATL3-201ENST00000398868 NBEAQ8NFP9 2946 aa5.61□□□□□ -1.51
ATL3-201ENST00000398868 PLAC8Q9NZF1 115 aa5.6□□□□□ -1.51
ATL3-201ENST00000398868 NOTCH1P46531 2555 aa5.6□□□□□ -1.51
ATL3-201ENST00000398868 DMBT1Q9UGM3 2413 aaPredicted RBP5.6□□□□□ -1.51
ATL3-201ENST00000398868 RPL37P61927 97 aaKnown RBP5.59□□□□□ -1.51
ATL3-201ENST00000398868 CSMD1Q96PZ7 3565 aa5.59□□□□□ -1.51
ATL3-201ENST00000398868 ITPR2Q14571 2701 aa5.58□□□□□ -1.52
ATL3-201ENST00000398868 ZNF292O60281 2723 aa5.58□□□□□ -1.52
ATL3-201ENST00000398868 NDUFAF8A1L188 74 aa5.58□□□□□ -1.52
ATL3-201ENST00000398868 M0QZ58 72 aa5.57□□□□□ -1.52
ATL3-201ENST00000398868 A8MU10 97 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms