RNA–Protein interactions for RNA: ENST00000398559.6

TMF1-201, Transcript of TATA element modulatory factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMF1, Length 6,849 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMF1-201ENST00000398559 KRTAP1-5Q9BYS1 174 aa7.04□□□□□ -1.28
TMF1-201ENST00000398559 C5orf42Q9H799 3197 aa7.02□□□□□ -1.29
TMF1-201ENST00000398559 Q6ZR54 194 aa7□□□□□ -1.29
TMF1-201ENST00000398559 MGAM2Q2M2H8 2515 aa6.99□□□□□ -1.29
TMF1-201ENST00000398559 SPATA8Q6RVD6 105 aa6.98□□□□□ -1.29
TMF1-201ENST00000398559 M0QZ58 72 aa6.97□□□□□ -1.29
TMF1-201ENST00000398559 KRTAP29-1A8MX34 341 aaPredicted RBP6.95□□□□□ -1.3
TMF1-201ENST00000398559 CEP350Q5VT06 3117 aa6.95□□□□□ -1.3
TMF1-201ENST00000398559 FLNAP21333 2647 aaKnown RBP6.94□□□□□ -1.3
TMF1-201ENST00000398559 KRTAP4-16G5E9R7 235 aaPredicted RBP6.94□□□□□ -1.3
TMF1-201ENST00000398559 KRTAP10-1P60331 282 aa6.94□□□□□ -1.3
TMF1-201ENST00000398559 HECTD1Q9ULT8 2610 aa6.93□□□□□ -1.3
TMF1-201ENST00000398559 UTRNP46939 3433 aa6.93□□□□□ -1.3
TMF1-201ENST00000398559 SEC61BP60468 96 aaKnown RBP6.93□□□□□ -1.3
TMF1-201ENST00000398559 EPG5Q9HCE0 2579 aa6.93□□□□□ -1.3
TMF1-201ENST00000398559 ADM2Q7Z4H4 148 aa6.92□□□□□ -1.3
TMF1-201ENST00000398559 KRTAP10-2P60368 255 aa6.92□□□□□ -1.3
TMF1-201ENST00000398559 ASB16-AS1Q495Z4 193 aa6.92□□□□□ -1.3
TMF1-201ENST00000398559 Q5VSD8 79 aa6.92□□□□□ -1.3
TMF1-201ENST00000398559 ITPR3Q14573 2671 aa6.9□□□□□ -1.31
TMF1-201ENST00000398559 PANO1I0J062 215 aa6.9□□□□□ -1.31
TMF1-201ENST00000398559 A0A087X002 238 aa6.87□□□□□ -1.31
TMF1-201ENST00000398559 NOTCH2NLQ7Z3S9 236 aa6.87□□□□□ -1.31
TMF1-201ENST00000398559 ATRQ13535 2644 aa6.85□□□□□ -1.31
TMF1-201ENST00000398559 CHD7Q9P2D1 2997 aa6.82□□□□□ -1.32
TMF1-201ENST00000398559 PCNTO95613 3336 aa6.82□□□□□ -1.32
TMF1-201ENST00000398559 A6NN06 94 aa6.82□□□□□ -1.32
TMF1-201ENST00000398559 CFAP54Q96N23 3096 aa6.81□□□□□ -1.32
TMF1-201ENST00000398559 PLAC4Q8WY50 150 aa6.8□□□□□ -1.32
TMF1-201ENST00000398559 KRTAP25-1Q3LHN0 102 aa6.79□□□□□ -1.32
TMF1-201ENST00000398559 A8MU10 97 aa6.78□□□□□ -1.32
TMF1-201ENST00000398559 FLNBO75369 2602 aaKnown RBP6.78□□□□□ -1.32
TMF1-201ENST00000398559 KRTAP16-1A8MUX0 517 aa6.77□□□□□ -1.33
TMF1-201ENST00000398559 KRTAP11-1Q8IUC1 163 aa6.77□□□□□ -1.33
TMF1-201ENST00000398559 LCE6AA0A183 80 aa6.76□□□□□ -1.33
TMF1-201ENST00000398559 A0A0C4DFX4 3053 aa6.75□□□□□ -1.33
TMF1-201ENST00000398559 MAST4O15021 2626 aa6.73□□□□□ -1.33
TMF1-201ENST00000398559 FLG2Q5D862 2391 aaPredicted RBP6.73□□□□□ -1.33
TMF1-201ENST00000398559 AKAP13Q12802 2813 aa6.72□□□□□ -1.33
TMF1-201ENST00000398559 CHD6Q8TD26 2715 aa6.72□□□□□ -1.33
TMF1-201ENST00000398559 CFAP46Q8IYW2 2715 aa6.69□□□□□ -1.34
TMF1-201ENST00000398559 KRTAP7-1Q8IUC3 87 aa6.69□□□□□ -1.34
TMF1-201ENST00000398559 HELZ2Q9BYK8 2649 aaKnown RBP6.68□□□□□ -1.34
TMF1-201ENST00000398559 NBEAL1Q6ZS30 2694 aa6.67□□□□□ -1.34
TMF1-201ENST00000398559 A8MUU9 505 aa6.67□□□□□ -1.34
TMF1-201ENST00000398559 C20orf166-AS1Q96NR2 134 aa6.66□□□□□ -1.34
TMF1-201ENST00000398559 RPS29P62273 56 aaKnown RBP6.64□□□□□ -1.35
TMF1-201ENST00000398559 MKI67P46013 3256 aaKnown RBP6.64□□□□□ -1.35
TMF1-201ENST00000398559 DMBT1Q9UGM3 2413 aaPredicted RBP6.64□□□□□ -1.35
TMF1-201ENST00000398559 NDUFAF8A1L188 74 aa6.64□□□□□ -1.35
TMF1-201ENST00000398559 MGAQ8IWI9 3026 aa6.61□□□□□ -1.35
TMF1-201ENST00000398559 CHD9Q3L8U1 2897 aa6.61□□□□□ -1.35
TMF1-201ENST00000398559 Q6ZRN7 208 aaPredicted RBP6.61□□□□□ -1.35
TMF1-201ENST00000398559 GCN1Q92616 2671 aaKnown RBP6.61□□□□□ -1.35
TMF1-201ENST00000398559 KRTAP13-2Q52LG2 175 aa6.6□□□□□ -1.35
TMF1-201ENST00000398559 TEX15Q9BXT5 2789 aa6.58□□□□□ -1.36
TMF1-201ENST00000398559 KRTAP13-1Q8IUC0 172 aa6.58□□□□□ -1.36
TMF1-201ENST00000398559 UNC79Q9P2D8 2635 aa6.57□□□□□ -1.36
TMF1-201ENST00000398559 STAB1Q9NY15 2570 aa6.56□□□□□ -1.36
TMF1-201ENST00000398559 LAMA2P24043 3122 aaKnown RBP6.56□□□□□ -1.36
TMF1-201ENST00000398559 CENPEQ02224 2701 aa6.56□□□□□ -1.36
TMF1-201ENST00000398559 TRIOO75962 3097 aa6.56□□□□□ -1.36
TMF1-201ENST00000398559 HTTP42858 3142 aa6.54□□□□□ -1.36
TMF1-201ENST00000398559 NBEAL2Q6ZNJ1 2754 aa6.51□□□□□ -1.37
TMF1-201ENST00000398559 C10orf95Q9H7T3 257 aa6.48□□□□□ -1.37
TMF1-201ENST00000398559 TNP1P09430 55 aa6.46□□□□□ -1.37
TMF1-201ENST00000398559 TRANK1O15050 2925 aa6.46□□□□□ -1.38
TMF1-201ENST00000398559 LAMA3Q16787 3333 aa6.45□□□□□ -1.38
TMF1-201ENST00000398559 RANBP2P49792 3224 aaKnown RBP6.45□□□□□ -1.38
TMF1-201ENST00000398559 WDFY4Q6ZS81 3184 aa6.45□□□□□ -1.38
TMF1-201ENST00000398559 FRYQ5TBA9 3013 aa6.44□□□□□ -1.38
TMF1-201ENST00000398559 FREM2Q5SZK8 3169 aa6.44□□□□□ -1.38
TMF1-201ENST00000398559 NOTCH1P46531 2555 aa6.43□□□□□ -1.38
TMF1-201ENST00000398559 TEP1Q99973 2627 aaKnown RBP6.41□□□□□ -1.38
TMF1-201ENST00000398559 CELSR3Q9NYQ7 3312 aa6.41□□□□□ -1.38
TMF1-201ENST00000398559 COL6A5A8TX70 2615 aa6.39□□□□□ -1.39
TMF1-201ENST00000398559 XIRP2A4UGR9 3374 aa6.39□□□□□ -1.39
TMF1-201ENST00000398559 BRCA2P51587 3418 aa6.38□□□□□ -1.39
TMF1-201ENST00000398559 SETXQ7Z333 2677 aaKnown RBP6.37□□□□□ -1.39
TMF1-201ENST00000398559 UNC80Q8N2C7 3258 aa6.36□□□□□ -1.39
TMF1-201ENST00000398559 STAB2Q8WWQ8 2551 aa6.35□□□□□ -1.39
TMF1-201ENST00000398559 VPS13AQ96RL7 3174 aa6.35□□□□□ -1.39
TMF1-201ENST00000398559 KALRNO60229 2985 aa6.34□□□□□ -1.39
TMF1-201ENST00000398559 PRUNE2Q8WUY3 3088 aa6.34□□□□□ -1.39
TMF1-201ENST00000398559 ZNF292O60281 2723 aa6.32□□□□□ -1.4
TMF1-201ENST00000398559 H0YAA0 97 aa6.31□□□□□ -1.4
TMF1-201ENST00000398559 MAP1AP78559 2803 aaPredicted RBP6.28□□□□□ -1.4
TMF1-201ENST00000398559 PP632Q6XCG6 107 aa6.28□□□□□ -1.4
TMF1-201ENST00000398559 DNAH14Q0VDD8 3507 aa6.28□□□□□ -1.4
TMF1-201ENST00000398559 ITPR2Q14571 2701 aa6.27□□□□□ -1.41
TMF1-201ENST00000398559 CDH23Q9H251 3354 aa6.26□□□□□ -1.41
TMF1-201ENST00000398559 APCP25054 2843 aa6.26□□□□□ -1.41
TMF1-201ENST00000398559 DSPP15924 2871 aaKnown RBP6.26□□□□□ -1.41
TMF1-201ENST00000398559 BAHCC1Q9P281 2608 aa6.25□□□□□ -1.41
TMF1-201ENST00000398559 KRTAP10-8P60410 259 aa6.24□□□□□ -1.41
TMF1-201ENST00000398559 UBR5O95071 2799 aaPredicted RBP6.23□□□□□ -1.41
TMF1-201ENST00000398559 XP32Q5T750 250 aa6.23□□□□□ -1.41
TMF1-201ENST00000398559 KRTAP1-4P0C5Y4 121 aa6.22□□□□□ -1.41
TMF1-201ENST00000398559 A0A1B0GVY2 172 aa6.22□□□□□ -1.41
TMF1-201ENST00000398559 P0C880 135 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms