RNA–Protein interactions for RNA: ENST00000398541.2

RPS4XP3-201, Transcript of ribosomal protein S4X pseudogene 3, humanhuman

BASIC

Gene RPS4XP3, Length 413 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4XP3-201ENST00000398541 APCP25054 2843 aa0.77□□□□□ -2.29
RPS4XP3-201ENST00000398541 NCOR1O75376 2440 aa0.76□□□□□ -2.29
RPS4XP3-201ENST00000398541 KIAA0586Q9BVV6 1533 aa0.76□□□□□ -2.29
RPS4XP3-201ENST00000398541 SPINK1P00995 79 aa0.76□□□□□ -2.29
RPS4XP3-201ENST00000398541 IAPPP10997 89 aa0.76□□□□□ -2.29
RPS4XP3-201ENST00000398541 SMR3AQ99954 134 aa0.76□□□□□ -2.29
RPS4XP3-201ENST00000398541 REV3LO60673 3130 aa0.75□□□□□ -2.29
RPS4XP3-201ENST00000398541 ABCA5Q8WWZ7 1642 aa0.75□□□□□ -2.29
RPS4XP3-201ENST00000398541 KRTAP2-3P0C7H8 128 aa0.75□□□□□ -2.29
RPS4XP3-201ENST00000398541 KRTAP2-4Q9BYR9 128 aa0.75□□□□□ -2.29
RPS4XP3-201ENST00000398541 KRTAP2-1Q9BYU5 128 aa0.75□□□□□ -2.29
RPS4XP3-201ENST00000398541 ABRACLQ9P1F3 81 aa0.75□□□□□ -2.29
RPS4XP3-201ENST00000398541 C6orf48Q9UBA6 75 aa0.75□□□□□ -2.29
RPS4XP3-201ENST00000398541 SMIM27A0A1W2PRY6 76 aa0.74□□□□□ -2.29
RPS4XP3-201ENST00000398541 LINC00308Q8TCZ7 52 aa0.74□□□□□ -2.29
RPS4XP3-201ENST00000398541 NRXN3Q9Y4C0 1643 aa0.74□□□□□ -2.29
RPS4XP3-201ENST00000398541 TENM1Q9UKZ4 2725 aa0.73□□□□□ -2.29
RPS4XP3-201ENST00000398541 FBN2P35556 2912 aa0.73□□□□□ -2.29
RPS4XP3-201ENST00000398541 ZNF469Q96JG9 3925 aaPredicted RBP0.73□□□□□ -2.29
RPS4XP3-201ENST00000398541 LINC01546A6NGU7 62 aa0.73□□□□□ -2.29
RPS4XP3-201ENST00000398541 ZFYVE26Q68DK2 2539 aa0.73□□□□□ -2.29
RPS4XP3-201ENST00000398541 TOGARAM1Q9Y4F4 1720 aa0.72□□□□□ -2.29
RPS4XP3-201ENST00000398541 VWFP04275 2813 aa0.72□□□□□ -2.29
RPS4XP3-201ENST00000398541 TENM4Q6N022 2769 aa0.72□□□□□ -2.29
RPS4XP3-201ENST00000398541 DSPP15924 2871 aaKnown RBP0.72□□□□□ -2.29
RPS4XP3-201ENST00000398541 NOTCH1P46531 2555 aa0.71□□□□□ -2.3
RPS4XP3-201ENST00000398541 RPS27P42677 84 aaKnown RBP0.71□□□□□ -2.3
RPS4XP3-201ENST00000398541 RPS27LQ71UM5 84 aaKnown RBP0.71□□□□□ -2.3
RPS4XP3-201ENST00000398541 CREBBPQ92793 2442 aa0.71□□□□□ -2.3
RPS4XP3-201ENST00000398541 PCNX1Q96RV3 2341 aa0.71□□□□□ -2.3
RPS4XP3-201ENST00000398541 H0YGG7 62 aa0.7□□□□□ -2.3
RPS4XP3-201ENST00000398541 PTPN13Q12923 2485 aa0.7□□□□□ -2.3
RPS4XP3-201ENST00000398541 DDX60Q8IY21 1712 aaKnown RBP0.69□□□□□ -2.3
RPS4XP3-201ENST00000398541 UNC79Q9P2D8 2635 aa0.69□□□□□ -2.3
RPS4XP3-201ENST00000398541 HECTD1Q9ULT8 2610 aa0.69□□□□□ -2.3
RPS4XP3-201ENST00000398541 TRANK1O15050 2925 aa0.69□□□□□ -2.3
RPS4XP3-201ENST00000398541 CDC42BPAQ5VT25 1732 aa0.69□□□□□ -2.3
RPS4XP3-201ENST00000398541 H3BUA1 57 aa0.68□□□□□ -2.3
RPS4XP3-201ENST00000398541 WT1-ASQ06250 92 aa0.68□□□□□ -2.3
RPS4XP3-201ENST00000398541 IQGAP2Q13576 1575 aa0.67□□□□□ -2.3
RPS4XP3-201ENST00000398541 U3KQA8 63 aa0.67□□□□□ -2.3
RPS4XP3-201ENST00000398541 BSNQ9UPA5 3926 aa0.67□□□□□ -2.3
RPS4XP3-201ENST00000398541 PRLHP81277 87 aa0.66□□□□□ -2.3
RPS4XP3-201ENST00000398541 EP300Q09472 2414 aaPredicted RBP0.66□□□□□ -2.3
RPS4XP3-201ENST00000398541 FAT2Q9NYQ8 4349 aa0.65□□□□□ -2.31
RPS4XP3-201ENST00000398541 DEFB135Q30KP9 77 aa0.65□□□□□ -2.31
RPS4XP3-201ENST00000398541 WFDC10BQ8IUB3 73 aa0.65□□□□□ -2.31
RPS4XP3-201ENST00000398541 DEFB106AQ8N104 65 aa0.65□□□□□ -2.31
RPS4XP3-201ENST00000398541 MAP1BP46821 2468 aaKnown RBP0.65□□□□□ -2.31
RPS4XP3-201ENST00000398541 PKD1L2Q7Z442 2459 aa0.65□□□□□ -2.31
RPS4XP3-201ENST00000398541 WNK1Q9H4A3 2382 aa0.64□□□□□ -2.31
RPS4XP3-201ENST00000398541 CEP290O15078 2479 aa0.64□□□□□ -2.31
RPS4XP3-201ENST00000398541 TFF3Q07654 80 aa0.64□□□□□ -2.31
RPS4XP3-201ENST00000398541 SMIM2Q9BVW6 85 aa0.64□□□□□ -2.31
RPS4XP3-201ENST00000398541 NBASA2RRP1 2371 aa0.63□□□□□ -2.31
RPS4XP3-201ENST00000398541 LMO7Q8WWI1 1683 aa0.63□□□□□ -2.31
RPS4XP3-201ENST00000398541 USP24Q9UPU5 2620 aa0.63□□□□□ -2.31
RPS4XP3-201ENST00000398541 PRKDCP78527 4128 aaKnown RBP0.63□□□□□ -2.31
RPS4XP3-201ENST00000398541 M0R2T5 61 aa0.63□□□□□ -2.31
RPS4XP3-201ENST00000398541 KAAG1Q9UBP8 84 aa0.63□□□□□ -2.31
RPS4XP3-201ENST00000398541 S4R3F8 94 aa0.63□□□□□ -2.31
RPS4XP3-201ENST00000398541 NAV2Q8IVL1 2488 aa0.62□□□□□ -2.31
RPS4XP3-201ENST00000398541 TOP2AP11388 1531 aaKnown RBP0.62□□□□□ -2.31
RPS4XP3-201ENST00000398541 FAM208AQ9UK61 1670 aaKnown RBP0.62□□□□□ -2.31
RPS4XP3-201ENST00000398541 NOP10Q9NPE3 64 aaKnown RBP0.61□□□□□ -2.31
RPS4XP3-201ENST00000398541 UBR5O95071 2799 aaPredicted RBP0.6□□□□□ -2.31
RPS4XP3-201ENST00000398541 IQGAP1P46940 1657 aa0.6□□□□□ -2.31
RPS4XP3-201ENST00000398541 HUWE1Q7Z6Z7 4374 aaKnown RBP0.6□□□□□ -2.31
RPS4XP3-201ENST00000398541 OTOGQ6ZRI0 2925 aa0.6□□□□□ -2.31
RPS4XP3-201ENST00000398541 TNXBP22105 4242 aa0.59□□□□□ -2.31
RPS4XP3-201ENST00000398541 HIVEP3Q5T1R4 2406 aa0.59□□□□□ -2.31
RPS4XP3-201ENST00000398541 APC2O95996 2303 aa0.59□□□□□ -2.31
RPS4XP3-201ENST00000398541 AKAP13Q12802 2813 aa0.59□□□□□ -2.31
RPS4XP3-201ENST00000398541 PKD1L1Q8TDX9 2849 aa0.58□□□□□ -2.32
RPS4XP3-201ENST00000398541 PRM1P04553 51 aa0.58□□□□□ -2.32
RPS4XP3-201ENST00000398541 AHNAK2Q8IVF2 5795 aa0.58□□□□□ -2.32
RPS4XP3-201ENST00000398541 SYNE1Q8NF91 8797 aaKnown RBP0.58□□□□□ -2.32
RPS4XP3-201ENST00000398541 KIF21BO75037 1637 aa0.57□□□□□ -2.32
RPS4XP3-201ENST00000398541 PRRC2CQ9Y520 2896 aaKnown RBP0.57□□□□□ -2.32
RPS4XP3-201ENST00000398541 ACANP16112 2415 aa0.57□□□□□ -2.32
RPS4XP3-201ENST00000398541 SETXQ7Z333 2677 aaKnown RBP0.57□□□□□ -2.32
RPS4XP3-201ENST00000398541 NCOR2Q9Y618 2525 aa0.57□□□□□ -2.32
RPS4XP3-201ENST00000398541 NDUFA1O15239 70 aa0.56□□□□□ -2.32
RPS4XP3-201ENST00000398541 KRTAP5-10Q6L8G5 202 aa0.56□□□□□ -2.32
RPS4XP3-201ENST00000398541 IGSF10Q6WRI0 2623 aa0.56□□□□□ -2.32
RPS4XP3-201ENST00000398541 NFAT5O94916 1531 aa0.55□□□□□ -2.32
RPS4XP3-201ENST00000398541 DEFB131AP59861 70 aa0.55□□□□□ -2.32
RPS4XP3-201ENST00000398541 ATP7AQ04656 1500 aa0.54□□□□□ -2.32
RPS4XP3-201ENST00000398541 KRTAP21-1Q3LI58 79 aa0.54□□□□□ -2.32
RPS4XP3-201ENST00000398541 CLTCL1P53675 1640 aa0.53□□□□□ -2.32
RPS4XP3-201ENST00000398541 LRP1Q07954 4544 aaKnown RBP0.53□□□□□ -2.32
RPS4XP3-201ENST00000398541 IGLV5-48A0A075B6I7 105 aa0.53□□□□□ -2.32
RPS4XP3-201ENST00000398541 H3BNG1 76 aa0.53□□□□□ -2.32
RPS4XP3-201ENST00000398541 M0QY20 66 aa0.52□□□□□ -2.33
RPS4XP3-201ENST00000398541 TNRC18O15417 2968 aaPredicted RBP0.51□□□□□ -2.33
RPS4XP3-201ENST00000398541 TRPM2O94759 1503 aa0.51□□□□□ -2.33
RPS4XP3-201ENST00000398541 SAMD9LQ8IVG5 1584 aa0.51□□□□□ -2.33
RPS4XP3-201ENST00000398541 CACNA1AO00555 2505 aa0.5□□□□□ -2.33
RPS4XP3-201ENST00000398541 MYCBP2O75592 4640 aa0.5□□□□□ -2.33
RPS4XP3-201ENST00000398541 MUC16Q8WXI7 14507 aa0.5□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms