RNA–Protein interactions for RNA: ENST00000396828.8

NEDD8-202, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-202ENST00000396828 KRTAP1-4P0C5Y4 121 aa6.2□□□□□ -1.42
NEDD8-202ENST00000396828 TRACP01848 142 aa6.19□□□□□ -1.42
NEDD8-202ENST00000396828 PRLHP81277 87 aa6.19□□□□□ -1.42
NEDD8-202ENST00000396828 FAM218AQ96MZ4 157 aa6.19□□□□□ -1.42
NEDD8-202ENST00000396828 H3BMG7 143 aa6.17□□□□□ -1.42
NEDD8-202ENST00000396828 HIGD2AQ9BW72 106 aa6.17□□□□□ -1.42
NEDD8-202ENST00000396828 ZNF861PO60384 105 aa6.16□□□□□ -1.42
NEDD8-202ENST00000396828 Q9BRP9 147 aa6.16□□□□□ -1.42
NEDD8-202ENST00000396828 OCIAD2Q56VL3 154 aa6.15□□□□□ -1.42
NEDD8-202ENST00000396828 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.15□□□□□ -1.42
NEDD8-202ENST00000396828 SMCR5Q8TEV8 140 aa6.15□□□□□ -1.42
NEDD8-202ENST00000396828 ORMDL1Q9P0S3 153 aa6.15□□□□□ -1.42
NEDD8-202ENST00000396828 C9JAW5 83 aa6.14□□□□□ -1.43
NEDD8-202ENST00000396828 H3BQ85 93 aa6.14□□□□□ -1.43
NEDD8-202ENST00000396828 UBE2V1Q13404 147 aa6.14□□□□□ -1.43
NEDD8-202ENST00000396828 Q6ZQY7 126 aa6.14□□□□□ -1.43
NEDD8-202ENST00000396828 KRTAP13-1Q8IUC0 172 aa6.14□□□□□ -1.43
NEDD8-202ENST00000396828 ZNF706Q9Y5V0 76 aaPredicted RBP6.12□□□□□ -1.43
NEDD8-202ENST00000396828 F8W1H4 67 aa6.11□□□□□ -1.43
NEDD8-202ENST00000396828 H3BT86 120 aa6.11□□□□□ -1.43
NEDD8-202ENST00000396828 TMEM256-PLSCR3K7ERE1 68 aa6.11□□□□□ -1.43
NEDD8-202ENST00000396828 ERC2-IT1O76042 136 aa6.11□□□□□ -1.43
NEDD8-202ENST00000396828 BAALC-AS2P0C853 105 aa6.11□□□□□ -1.43
NEDD8-202ENST00000396828 PRR4Q16378 134 aa6.11□□□□□ -1.43
NEDD8-202ENST00000396828 DEFB105AQ8NG35 78 aa6.11□□□□□ -1.43
NEDD8-202ENST00000396828 PPDPFLQ8WWR9 84 aa6.11□□□□□ -1.43
NEDD8-202ENST00000396828 A0A087X002 238 aa6.09□□□□□ -1.43
NEDD8-202ENST00000396828 TEX49A0A1B0GTD5 131 aa6.09□□□□□ -1.43
NEDD8-202ENST00000396828 MTURNQ8N3F0 131 aa6.09□□□□□ -1.43
NEDD8-202ENST00000396828 ANKRD29Q8N6D5 301 aa6.09□□□□□ -1.43
NEDD8-202ENST00000396828 ST20-AS1Q8NBB2 130 aa6.09□□□□□ -1.43
NEDD8-202ENST00000396828 IGLV5-48A0A075B6I7 105 aa6.08□□□□□ -1.44
NEDD8-202ENST00000396828 GAGE2AQ6NT46 116 aa6.08□□□□□ -1.44
NEDD8-202ENST00000396828 PRO0461Q9UI25 63 aa6.08□□□□□ -1.44
NEDD8-202ENST00000396828 MUC17Q685J3 4493 aa6.07□□□□□ -1.44
NEDD8-202ENST00000396828 SPRR4Q96PI1 79 aa6.07□□□□□ -1.44
NEDD8-202ENST00000396828 LINC01547P58512 204 aaPredicted RBP6.06□□□□□ -1.44
NEDD8-202ENST00000396828 Q8N377 158 aa6.06□□□□□ -1.44
NEDD8-202ENST00000396828 ANAPC11Q9NYG5 84 aa6.06□□□□□ -1.44
NEDD8-202ENST00000396828 LAMTOR3Q9UHA4 124 aa6.06□□□□□ -1.44
NEDD8-202ENST00000396828 SPRR1BP22528 89 aa6.05□□□□□ -1.44
NEDD8-202ENST00000396828 NDUFV3P56181 108 aaKnown RBP6.05□□□□□ -1.44
NEDD8-202ENST00000396828 FAT4Q6V0I7 4981 aa6.05□□□□□ -1.44
NEDD8-202ENST00000396828 F8WEM9 126 aa6.04□□□□□ -1.44
NEDD8-202ENST00000396828 LINC00483Q53H64 154 aa6.04□□□□□ -1.44
NEDD8-202ENST00000396828 JMJD7-PLA2G4BH0Y9G9 81 aa6.03□□□□□ -1.44
NEDD8-202ENST00000396828 KRTAP13-2Q52LG2 175 aa6.02□□□□□ -1.45
NEDD8-202ENST00000396828 TEN1Q86WV5 123 aa6.02□□□□□ -1.45
NEDD8-202ENST00000396828 C3orf22Q8N5N4 141 aa6.02□□□□□ -1.45
NEDD8-202ENST00000396828 RBM3P98179 157 aaKnown RBP6.01□□□□□ -1.45
NEDD8-202ENST00000396828 SMIM29Q86T20 159 aa6.01□□□□□ -1.45
NEDD8-202ENST00000396828 ETDBQ3ZM63 59 aa6□□□□□ -1.45
NEDD8-202ENST00000396828 FAM229BQ4G0N7 80 aa6□□□□□ -1.45
NEDD8-202ENST00000396828 TYMSOSQ8TAI1 123 aa6□□□□□ -1.45
NEDD8-202ENST00000396828 DSCR8Q96T75 97 aa6□□□□□ -1.45
NEDD8-202ENST00000396828 RETNLBQ9BQ08 111 aa6□□□□□ -1.45
NEDD8-202ENST00000396828 KRTAP9-2Q9BYQ4 174 aa6□□□□□ -1.45
NEDD8-202ENST00000396828 IGLV9-49A0A0B4J1Y8 123 aa5.99□□□□□ -1.45
NEDD8-202ENST00000396828 A0A1B0GV72 72 aa5.99□□□□□ -1.45
NEDD8-202ENST00000396828 CRYGAP11844 174 aa5.99□□□□□ -1.45
NEDD8-202ENST00000396828 C9orf153Q5TBE3 101 aa5.99□□□□□ -1.45
NEDD8-202ENST00000396828 OBSCN-AS1Q96MR7 158 aa5.98□□□□□ -1.45
NEDD8-202ENST00000396828 PDE6GP18545 87 aa5.97□□□□□ -1.45
NEDD8-202ENST00000396828 C21orf62-AS1Q17RA5 79 aa5.97□□□□□ -1.45
NEDD8-202ENST00000396828 Q6JHZ5 121 aa5.97□□□□□ -1.45
NEDD8-202ENST00000396828 C14orf132Q9NPU4 83 aa5.97□□□□□ -1.45
NEDD8-202ENST00000396828 IGLV8-61A0A075B6I0 122 aa5.96□□□□□ -1.46
NEDD8-202ENST00000396828 H3BS24 57 aa5.96□□□□□ -1.46
NEDD8-202ENST00000396828 MOBPQ13875 183 aa5.96□□□□□ -1.46
NEDD8-202ENST00000396828 Q8NBF4 154 aa5.96□□□□□ -1.46
NEDD8-202ENST00000396828 LOC110117498A0A087WWA1 95 aa5.95□□□□□ -1.46
NEDD8-202ENST00000396828 TRBV7-4A0A0J9YYF1 115 aa5.94□□□□□ -1.46
NEDD8-202ENST00000396828 SSBP3-AS1Q7Z2R9 100 aa5.94□□□□□ -1.46
NEDD8-202ENST00000396828 J3QR89 54 aa5.93□□□□□ -1.46
NEDD8-202ENST00000396828 IGFL1Q6UW32 110 aa5.93□□□□□ -1.46
NEDD8-202ENST00000396828 LINC00304Q8N9R0 145 aa5.93□□□□□ -1.46
NEDD8-202ENST00000396828 A0A0U1RQV1 116 aa5.92□□□□□ -1.46
NEDD8-202ENST00000396828 CCKP06307 115 aa5.92□□□□□ -1.46
NEDD8-202ENST00000396828 Q6ZQT0 140 aa5.92□□□□□ -1.46
NEDD8-202ENST00000396828 VPS25Q9BRG1 176 aa5.92□□□□□ -1.46
NEDD8-202ENST00000396828 IGLV7-46A0A075B6I9 117 aa5.89□□□□□ -1.47
NEDD8-202ENST00000396828 A0A1B0GW54 56 aa5.89□□□□□ -1.47
NEDD8-202ENST00000396828 TPRXLQ17RH7 258 aa5.89□□□□□ -1.47
NEDD8-202ENST00000396828 CDIP1Q9H305 208 aa5.89□□□□□ -1.47
NEDD8-202ENST00000396828 A0A0G2JQZ4 141 aa5.88□□□□□ -1.47
NEDD8-202ENST00000396828 A0A1W2PNM2 257 aa5.88□□□□□ -1.47
NEDD8-202ENST00000396828 K7ERU9 68 aa5.88□□□□□ -1.47
NEDD8-202ENST00000396828 ACYP1P07311 99 aa5.88□□□□□ -1.47
NEDD8-202ENST00000396828 CD164Q04900 197 aa5.88□□□□□ -1.47
NEDD8-202ENST00000396828 Q6Q795 121 aa5.88□□□□□ -1.47
NEDD8-202ENST00000396828 HRCT1Q6UXD1 115 aa5.87□□□□□ -1.47
NEDD8-202ENST00000396828 FAM240AA0A1B0GVK7 77 aa5.86□□□□□ -1.47
NEDD8-202ENST00000396828 SPAG11AQ6PDA7 123 aa5.86□□□□□ -1.47
NEDD8-202ENST00000396828 TRBV7-7A0A0K0K1E9 115 aa5.85□□□□□ -1.47
NEDD8-202ENST00000396828 A0A087WSZ3 146 aa5.83□□□□□ -1.48
NEDD8-202ENST00000396828 KRTAP9-6A0A140TA67 174 aa5.83□□□□□ -1.48
NEDD8-202ENST00000396828 SPINK1P00995 79 aa5.83□□□□□ -1.48
NEDD8-202ENST00000396828 KRTAP4-1Q9BYQ7 146 aa5.83□□□□□ -1.48
NEDD8-202ENST00000396828 SS18L2Q9UHA2 77 aa5.83□□□□□ -1.48
NEDD8-202ENST00000396828 LIMD2Q9BT23 127 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms