RNA–Protein interactions for RNA: ENST00000396364.7

FXN-202, Transcript of frataxin, humanhuman

TSL 5 BASIC

Gene FXN, Length 980 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-202ENST00000396364 DMBT1Q9UGM3 2413 aaPredicted RBP12.54□□□□□ -0.4
FXN-202ENST00000396364 F8WEM9 126 aa12.54□□□□□ -0.4
FXN-202ENST00000396364 LINC01547P58512 204 aaPredicted RBP12.54□□□□□ -0.4
FXN-202ENST00000396364 MOBPQ13875 183 aa12.53□□□□□ -0.4
FXN-202ENST00000396364 COL5A1-AS1Q5SY13 56 aa12.53□□□□□ -0.4
FXN-202ENST00000396364 Q8N377 158 aa12.53□□□□□ -0.4
FXN-202ENST00000396364 Q8NBF4 154 aa12.53□□□□□ -0.4
FXN-202ENST00000396364 TRACP01848 142 aa12.52□□□□□ -0.41
FXN-202ENST00000396364 C9orf118A6NHY6 69 aa12.51□□□□□ -0.41
FXN-202ENST00000396364 H3BUT2 72 aa12.51□□□□□ -0.41
FXN-202ENST00000396364 LST1O00453 97 aa12.51□□□□□ -0.41
FXN-202ENST00000396364 C4orf48Q5BLP8 95 aa12.51□□□□□ -0.41
FXN-202ENST00000396364 ORMDL1Q9P0S3 153 aa12.51□□□□□ -0.41
FXN-202ENST00000396364 ATXN8Q156A1 80 aa12.5□□□□□ -0.41
FXN-202ENST00000396364 LINC00304Q8N9R0 145 aa12.5□□□□□ -0.41
FXN-202ENST00000396364 NAA38Q9BRA0 125 aaKnown RBP12.5□□□□□ -0.41
FXN-202ENST00000396364 TRBV20-1A0A075B6N2 111 aa12.49□□□□□ -0.41
FXN-202ENST00000396364 TAX1BP3O14907 124 aa12.49□□□□□ -0.41
FXN-202ENST00000396364 SPAG11AQ6PDA7 123 aa12.49□□□□□ -0.41
FXN-202ENST00000396364 SMIM29Q86T20 159 aa12.47□□□□□ -0.41
FXN-202ENST00000396364 TMEM256-PLSCR3K7ERE1 68 aa12.46□□□□□ -0.41
FXN-202ENST00000396364 TNXBP22105 4242 aa12.45□□□□□ -0.42
FXN-202ENST00000396364 FABP2P12104 132 aa12.45□□□□□ -0.42
FXN-202ENST00000396364 A0A1W2PPM0 123 aa12.43□□□□□ -0.42
FXN-202ENST00000396364 TCL1BO95988 128 aa12.43□□□□□ -0.42
FXN-202ENST00000396364 Q6JHZ5 121 aa12.41□□□□□ -0.42
FXN-202ENST00000396364 SPINK1P00995 79 aa12.4□□□□□ -0.42
FXN-202ENST00000396364 NDUFV3P56181 108 aaKnown RBP12.4□□□□□ -0.42
FXN-202ENST00000396364 IGLV8-61A0A075B6I0 122 aa12.36□□□□□ -0.43
FXN-202ENST00000396364 UBE2V1Q13404 147 aa12.36□□□□□ -0.43
FXN-202ENST00000396364 RPS29P62273 56 aaKnown RBP12.35□□□□□ -0.43
FXN-202ENST00000396364 CD164Q04900 197 aa12.35□□□□□ -0.43
FXN-202ENST00000396364 H3BMG7 143 aa12.34□□□□□ -0.43
FXN-202ENST00000396364 BAALC-AS2P0C853 105 aa12.34□□□□□ -0.43
FXN-202ENST00000396364 SPCS1Q9Y6A9 102 aa12.32□□□□□ -0.44
FXN-202ENST00000396364 LIMD2Q9BT23 127 aa12.31□□□□□ -0.44
FXN-202ENST00000396364 C9JAW5 83 aa12.3□□□□□ -0.44
FXN-202ENST00000396364 ANKRD29Q8N6D5 301 aa12.3□□□□□ -0.44
FXN-202ENST00000396364 IGFL1Q6UW32 110 aa12.28□□□□□ -0.44
FXN-202ENST00000396364 HRCT1Q6UXD1 115 aa12.28□□□□□ -0.44
FXN-202ENST00000396364 RBM3P98179 157 aaKnown RBP12.24□□□□□ -0.45
FXN-202ENST00000396364 GTF2H5Q6ZYL4 71 aa12.24□□□□□ -0.45
FXN-202ENST00000396364 JMJD7-PLA2G4BH0Y9G9 81 aa12.23□□□□□ -0.45
FXN-202ENST00000396364 H3BT86 120 aa12.23□□□□□ -0.45
FXN-202ENST00000396364 DSCR8Q96T75 97 aa12.22□□□□□ -0.45
FXN-202ENST00000396364 K7EP34 96 aa12.21□□□□□ -0.45
FXN-202ENST00000396364 A0A0G2JQZ4 141 aa12.2□□□□□ -0.46
FXN-202ENST00000396364 A0A1B0GV72 72 aa12.2□□□□□ -0.46
FXN-202ENST00000396364 TEN1Q86WV5 123 aa12.2□□□□□ -0.46
FXN-202ENST00000396364 Q6Q795 121 aa12.19□□□□□ -0.46
FXN-202ENST00000396364 HERC1Q15751 4861 aa12.17□□□□□ -0.46
FXN-202ENST00000396364 TRBV7-7A0A0K0K1E9 115 aa12.17□□□□□ -0.46
FXN-202ENST00000396364 PRR4Q16378 134 aa12.17□□□□□ -0.46
FXN-202ENST00000396364 Q5XG85 94 aa12.17□□□□□ -0.46
FXN-202ENST00000396364 SS18L2Q9UHA2 77 aa12.15□□□□□ -0.46
FXN-202ENST00000396364 PDE6GP18545 87 aa12.14□□□□□ -0.47
FXN-202ENST00000396364 C21orf62-AS1Q17RA5 79 aa12.14□□□□□ -0.47
FXN-202ENST00000396364 FP248Q71RG6 208 aaPredicted RBP12.14□□□□□ -0.47
FXN-202ENST00000396364 TRBV7-4A0A0J9YYF1 115 aa12.13□□□□□ -0.47
FXN-202ENST00000396364 MTURNQ8N3F0 131 aa12.13□□□□□ -0.47
FXN-202ENST00000396364 RETNLBQ9BQ08 111 aa12.13□□□□□ -0.47
FXN-202ENST00000396364 CCKP06307 115 aa12.12□□□□□ -0.47
FXN-202ENST00000396364 VPS25Q9BRG1 176 aa12.09□□□□□ -0.47
FXN-202ENST00000396364 A0A1W2PNM2 257 aa12.08□□□□□ -0.48
FXN-202ENST00000396364 LOC110117498A0A087WWA1 95 aa12.07□□□□□ -0.48
FXN-202ENST00000396364 ASB16-AS1Q495Z4 193 aa12.07□□□□□ -0.48
FXN-202ENST00000396364 IGLV7-46A0A075B6I9 117 aa12.06□□□□□ -0.48
FXN-202ENST00000396364 A0A087WSZ3 146 aa12.06□□□□□ -0.48
FXN-202ENST00000396364 OBSCN-AS1Q96MR7 158 aa12.06□□□□□ -0.48
FXN-202ENST00000396364 F8W1H4 67 aa12.05□□□□□ -0.48
FXN-202ENST00000396364 C14orf132Q9NPU4 83 aa12.04□□□□□ -0.48
FXN-202ENST00000396364 A0A1B0GW54 56 aa12.03□□□□□ -0.48
FXN-202ENST00000396364 Q6ZQT0 140 aa12.02□□□□□ -0.49
FXN-202ENST00000396364 PRO0461Q9UI25 63 aa12.02□□□□□ -0.49
FXN-202ENST00000396364 SMCPP49901 116 aaPredicted RBP12□□□□□ -0.49
FXN-202ENST00000396364 C1orf195Q5TG92 126 aa12□□□□□ -0.49
FXN-202ENST00000396364 TPRXLQ17RH7 258 aa11.96□□□□□ -0.49
FXN-202ENST00000396364 HMCN2Q8NDA2 5059 aa11.92□□□□□ -0.5
FXN-202ENST00000396364 A0A1B0GV90 55 aa11.9□□□□□ -0.5
FXN-202ENST00000396364 CDIP1Q9H305 208 aa11.89□□□□□ -0.51
FXN-202ENST00000396364 ETDBQ3ZM63 59 aa11.86□□□□□ -0.51
FXN-202ENST00000396364 KRTAP13-3Q3SY46 172 aa11.85□□□□□ -0.51
FXN-202ENST00000396364 IGKV4-1P06312 121 aa11.83□□□□□ -0.52
FXN-202ENST00000396364 Q96NJ1 140 aa11.83□□□□□ -0.52
FXN-202ENST00000396364 SIGMAR1Q99720 223 aa11.83□□□□□ -0.52
FXN-202ENST00000396364 J3KT08 172 aa11.82□□□□□ -0.52
FXN-202ENST00000396364 NREPQ16612 68 aa11.82□□□□□ -0.52
FXN-202ENST00000396364 LINC00472Q9H8W2 130 aa11.82□□□□□ -0.52
FXN-202ENST00000396364 C9orf92A6NGG3 77 aa11.76□□□□□ -0.53
FXN-202ENST00000396364 DEFB116Q30KQ4 102 aa11.75□□□□□ -0.53
FXN-202ENST00000396364 NDUFB1O75438 58 aa11.73□□□□□ -0.53
FXN-202ENST00000396364 UBL5Q9BZL1 73 aa11.72□□□□□ -0.53
FXN-202ENST00000396364 LPAP08519 4548 aa11.72□□□□□ -0.53
FXN-202ENST00000396364 LRP2P98164 4655 aa11.68□□□□□ -0.54
FXN-202ENST00000396364 XP32Q5T750 250 aa11.68□□□□□ -0.54
FXN-202ENST00000396364 ACYP1P07311 99 aa11.66□□□□□ -0.54
FXN-202ENST00000396364 Q6ZVQ6 151 aa11.66□□□□□ -0.54
FXN-202ENST00000396364 A0A1B0GVX0 72 aa11.65□□□□□ -0.54
FXN-202ENST00000396364 BPY2O14599 106 aa11.65□□□□□ -0.54
FXN-202ENST00000396364 LINC00313P59037 77 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms